FFCP PHASE1:Hg19::chr10:131909071..131909102,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387723 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000456581,NR_034125,uc010qus.1_5end | |||
|description=CAGE_peak_1_at_LOC387723_5end | |||
|id=chr10:131909071..131909102,- | |||
|ontology_enrichment_celltype=CL:0000791!4.00e-11!18;CL:0000789!4.00e-11!18;CL:0002420!4.00e-11!18;CL:0002419!4.00e-11!18;CL:0000790!4.00e-11!18;CL:0000838!4.49e-10!52;CL:0000542!4.98e-10!53;CL:0000051!4.98e-10!53;CL:0000625!3.38e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.52e-12;18!CL:0000789;9.52e-12;18!CL:0002419;9.52e-12;18!CL:0000625;8.28e-09;11!CL:0000084;4.41e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.64e-12,18;CL:0000789,5.64e-12,18;CL:0002420,5.64e-12,18;CL:0002419,5.64e-12,18;CL:0000790,5.64e-12,18;CL:0000838,1.17e-09,52;CL:0000542,1.27e-09,53;CL:0000051,1.27e-09,53;CL:0000625,8.66e-09,11;CL:0000084,5.64e-07,25;CL:0000827,5.64e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;9.52e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.43e-25!115;UBERON:0001049!6.83e-13!57;UBERON:0005068!6.83e-13!57;UBERON:0006241!6.83e-13!57;UBERON:0007135!6.83e-13!57;UBERON:0002780!1.27e-11!41;UBERON:0001890!1.27e-11!41;UBERON:0006240!1.27e-11!41;UBERON:0003080!4.06e-11!42;UBERON:0002616!9.52e-11!59;UBERON:0001893!4.40e-10!34;UBERON:0002020!6.95e-10!34;UBERON:0003528!6.95e-10!34;UBERON:0002791!1.23e-09!33;UBERON:0001869!4.20e-09!32;UBERON:0003075!1.29e-08!86;UBERON:0007284!1.29e-08!86;UBERON:0002346!2.01e-08!90;UBERON:0000955!2.24e-08!69;UBERON:0006238!2.24e-08!69;UBERON:0003056!3.51e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.73e-09;41!UBERON:0001890;1.73e-09;41!UBERON:0001893;1.81e-09;34!UBERON:0003528;4.15e-09;34!UBERON:0002020;4.15e-09;34!UBERON:0002791;6.85e-09;32!UBERON:0001869;7.40e-09;32!UBERON:0000073;9.29e-09;53!UBERON:0002616;9.29e-09;53!UBERON:0007023;4.38e-07;114!UBERON:0002619;4.84e-07;22!UBERON:0000956;4.85e-07;25!UBERON:0000203;4.85e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.54e-26,114;UBERON:0001049,8.50e-15,56;UBERON:0005068,8.50e-15,56;UBERON:0006241,8.50e-15,56;UBERON:0007135,8.50e-15,56;UBERON:0000073,5.46e-14,53;UBERON:0002616,5.46e-14,53;UBERON:0002780,1.62e-12,41;UBERON:0001890,1.62e-12,41;UBERON:0003080,1.62e-12,41;UBERON:0006240,1.62e-12,41;UBERON:0003075,2.13e-11,82;UBERON:0007284,2.13e-11,82;UBERON:0002346,3.76e-11,86;UBERON:0001893,7.68e-11,34;UBERON:0003528,1.26e-10,34;UBERON:0002020,1.26e-10,34;UBERON:0000955,7.10e-10,68;UBERON:0006238,7.10e-10,68;UBERON:0002791,7.80e-10,32;UBERON:0001869,8.96e-10,32;UBERON:0003056,2.43e-08,61;UBERON:0010371,4.84e-08,104;UBERON:0001017,5.77e-08,81;UBERON:0002619,4.24e-07,22;UBERON:0001016,5.59e-07,89;UBERON:0000956,6.01e-07,25;UBERON:0000203,6.01e-07,25 | |||
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| |||
|short_description=p1@LOC387723 | |||
}} |
Revision as of 05:37, 11 January 2014
Short description: | p1@LOC387723 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC387723_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000456581, NR_034125, uc010qus.1_5end |
EntrezGene: | LOC387723 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.64e-12 | 18 |
alpha-beta T cell | 5.64e-12 | 18 |
immature T cell | 5.64e-12 | 18 |
mature T cell | 5.64e-12 | 18 |
immature alpha-beta T cell | 5.64e-12 | 18 |
lymphoid lineage restricted progenitor cell | 1.17e-09 | 52 |
lymphocyte | 1.27e-09 | 53 |
common lymphoid progenitor | 1.27e-09 | 53 |
CD8-positive, alpha-beta T cell | 8.66e-09 | 11 |
T cell | 5.64e-07 | 25 |
pro-T cell | 5.64e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.54e-26 | 114 |
neural tube | 8.50e-15 | 56 |
neural rod | 8.50e-15 | 56 |
future spinal cord | 8.50e-15 | 56 |
neural keel | 8.50e-15 | 56 |
regional part of nervous system | 5.46e-14 | 53 |
regional part of brain | 5.46e-14 | 53 |
regional part of forebrain | 1.62e-12 | 41 |
forebrain | 1.62e-12 | 41 |
anterior neural tube | 1.62e-12 | 41 |
future forebrain | 1.62e-12 | 41 |
neural plate | 2.13e-11 | 82 |
presumptive neural plate | 2.13e-11 | 82 |
neurectoderm | 3.76e-11 | 86 |
telencephalon | 7.68e-11 | 34 |
brain grey matter | 1.26e-10 | 34 |
gray matter | 1.26e-10 | 34 |
brain | 7.10e-10 | 68 |
future brain | 7.10e-10 | 68 |
regional part of telencephalon | 7.80e-10 | 32 |
cerebral hemisphere | 8.96e-10 | 32 |
pre-chordal neural plate | 2.43e-08 | 61 |
ecto-epithelium | 4.84e-08 | 104 |
central nervous system | 5.77e-08 | 81 |
regional part of cerebral cortex | 4.24e-07 | 22 |
nervous system | 5.59e-07 | 89 |
cerebral cortex | 6.01e-07 | 25 |
pallium | 6.01e-07 | 25 |