FFCP PHASE1:Hg19::chr11:2160036..2160049,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=21bp_to_BC017277_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_7_at_BC017277_5end | |||
|id=chr11:2160036..2160049,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.73e-25;19!CL:0002575;1.18e-09;2!CL:0002536;1.81e-09;2!CL:0002549;7.10e-09;2!CL:0002537;1.69e-08;5!CL:0002541;5.85e-07;3!CL:0002577;9.36e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.51e-25,19;CL:0002575,1.18e-09,2;CL:0002536,1.81e-09,2;CL:0002549,8.36e-09,2;CL:0002537,1.71e-08,5;CL:0002541,5.77e-07,3;CL:0002577,9.63e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.27e-09;11!UBERON:0009497;4.33e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.74e-16!14;UBERON:0000158!5.74e-16!14;UBERON:0000478!1.89e-14!24;UBERON:0003124!9.29e-12!7;UBERON:0001987!2.49e-07!4;UBERON:0004340!2.49e-07!4;UBERON:0004923!3.95e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.50e-27;24!UBERON:0005631;1.21e-20;10!UBERON:0000158;1.21e-20;10!UBERON:0000305;2.33e-15;7!UBERON:0001987;2.12e-10;4!UBERON:0005629;7.10e-09;2!UBERON:0005358;7.10e-09;2!UBERON:0001886;7.10e-09;2!UBERON:0004086;7.10e-09;2!UBERON:0005282;7.10e-09;2!UBERON:0005281;7.10e-09;2!UBERON:0000922;7.48e-09;49!UBERON:0003124;5.85e-07;3!UBERON:0000920;5.85e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.48e-29,14;UBERON:0000158,2.48e-29,14;UBERON:0000478,1.41e-27,24;UBERON:0003124,1.23e-15,7;UBERON:0000305,2.36e-15,7;UBERON:0004871,2.14e-13,8;UBERON:0001987,2.22e-10,4;UBERON:0004340,2.22e-10,4;UBERON:0005629,8.36e-09,2;UBERON:0005358,8.36e-09,2;UBERON:0001886,8.36e-09,2;UBERON:0004086,8.36e-09,2;UBERON:0005282,8.36e-09,2;UBERON:0005281,8.36e-09,2;UBERON:0000920,5.77e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0.697801167972428,5.24259293112413,6.85794143393979,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0.464448369948228,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21085942115945,2.30470369792,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32068784066407,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,8.68194568626309,1.64648067356154,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0,0.356857977594324,0,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,0,5.48243240895674,15.4414540714885,0,0,0,0.606255142892519,6.65741758041988,17.5386370131215,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,3.02148623979056,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0.275673144969061,0,0.145016693914229,0,1.4245125703478,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0.255897791311334,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589494246078727,0,0,0,0,0,0,0,0.670302275535787,0,1.60044461320525,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,18.1445808400644,6.83018765915069,16.5866779133585,0,0,0,0,0.844501632511974,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.384751292518985,0,1.61394733071642,0,0,19.1400695839152,0.915975934018623,18.6562171606522,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0.134802265961354,26.48506236086,0,0,0,0,0,2.41981432097328,0.61214552326098,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,3.61569185248852,0,0,0,0,0,0,0.19980960958213,0,0,7.89336990165037,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0.399358000997982,0,0.223171457441873,2.01550417460179,0,0,10.8720791583969,10.3019822976458,11.5260059990656,1.96854963029498,0,0,0,0,0,0,0,0,0,0,0,0.83927341015997,0,0,0,2.1440859791201,1.32418394073086,0,0,0,0,0,0,0,0,0.146552233678082,31.8016533389331,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0.795664888465099,0.150420656698515,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0.455324382702595,8.24932042512541,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,1.96190514319652,0.913158720509496,0,0,0.714765441766563,0.158013611732727,0,5.9111812582877,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0.609589624911347,0,0.205325613712494,40.593505096837,0.485710993059139,0,2.78531085225916,0,0,0,0,0,0.655678681511872,0,0,0.471353094203252,0.588925401344836,0,0.8453114551668,0,0,0.257831551894309,0,0,0,0,2.19100916473955,0,0,0,0,1.30905207102113,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,10.9509638473321,0,0.372448285775147,0,0.12729431655633,3.63810940124795,0,49.2815953562805,0.0673520530145875,0.215166616178029,4.9899053481902,0.162806537221949,0,0,0.808426818959282,9.38563769613817,0.122241444182866,2.03448089157869,0,0,0 | |||
|short_description=p7@BC017277 | |||
}} |
Revision as of 06:10, 11 January 2014
Short description: | p7@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 21bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.51e-25 | 19 |
central nervous system pericyte | 1.18e-09 | 2 |
amniotic epithelial cell | 1.81e-09 | 2 |
fibroblast of choroid plexus | 8.36e-09 | 2 |
amnion mesenchymal stem cell | 1.71e-08 | 5 |
chorionic membrane mesenchymal stem cell | 5.77e-07 | 3 |
placental epithelial cell | 9.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.48e-29 | 14 |
membranous layer | 2.48e-29 | 14 |
extraembryonic structure | 1.41e-27 | 24 |
chorion | 1.23e-15 | 7 |
amnion | 2.36e-15 | 7 |
somatic layer of lateral plate mesoderm | 2.14e-13 | 8 |
placenta | 2.22e-10 | 4 |
allantois | 2.22e-10 | 4 |
vascular plexus | 8.36e-09 | 2 |
ventricle of nervous system | 8.36e-09 | 2 |
choroid plexus | 8.36e-09 | 2 |
brain ventricle | 8.36e-09 | 2 |
ventricular system of brain | 8.36e-09 | 2 |
ventricular system of central nervous system | 8.36e-09 | 2 |
egg chorion | 5.77e-07 | 3 |