FFCP PHASE1:Hg19::chr11:118842467..118842477,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283150 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29980 | |||
|TSSclassifier=strong | |||
|UniProt=Q08AS8 | |||
|association_with_transcript=45bp_to_ENST00000531539_5end | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_1_at_FOXR1_5end | |||
|id=chr11:118842467..118842477,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.46e-17!7;CL:0000586!2.46e-17!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.74e-29;7!CL:0000586;2.74e-29;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.74e-29,7;CL:0000586,2.74e-29,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.50e-45;10!UBERON:0005564;4.50e-45;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;4.14e-10;22!DOID:2994;4.14e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.14e-10,22;DOID:2994,4.14e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.93e-57!8;UBERON:0003135!1.49e-41!11;UBERON:0000991!4.18e-22!21;UBERON:0009196!4.18e-22!21;UBERON:0009117!4.18e-22!21;UBERON:0005564!4.18e-22!21;UBERON:0004176!3.95e-21!22;UBERON:0003101!3.95e-21!22;UBERON:0000079!3.95e-21!22;UBERON:0002323!2.16e-10!46;UBERON:0003133!5.61e-10!48;UBERON:0004458!8.77e-10!49;UBERON:0002370!2.61e-08!4;UBERON:0005058!2.61e-08!4;UBERON:0009113!2.61e-08!4;UBERON:0003295!2.61e-08!4;UBERON:0005562!2.61e-08!4;UBERON:0005156!3.36e-08!59;UBERON:0000990!3.36e-08!59;UBERON:0003886!1.05e-07!63;UBERON:0002553!5.66e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.02e-56;8!UBERON:0005795;5.12e-50;1!UBERON:0003135;4.36e-41;11!UBERON:0000991;4.59e-22;21!UBERON:0003101;4.13e-21;22!UBERON:0000079;4.13e-21;22!UBERON:0002050;3.42e-11;5!UBERON:0005423;3.42e-11;5!UBERON:0002323;3.72e-08;45!UBERON:0003133;7.93e-08;44!UBERON:0000922;8.47e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.57e-56,8;UBERON:0003135,4.07e-41,11;UBERON:0000991,4.43e-22,21;UBERON:0009196,4.43e-22,21;UBERON:0009117,4.43e-22,21;UBERON:0005564,4.43e-22,21;UBERON:0004176,3.99e-21,22;UBERON:0003101,3.99e-21,22;UBERON:0000079,3.99e-21,22;UBERON:0002323,1.31e-10,46;UBERON:0003133,3.32e-10,48;UBERON:0004458,5.14e-10,49;UBERON:0003886,3.61e-09,54;UBERON:0005156,1.83e-08,59;UBERON:0000990,1.83e-08,59;UBERON:0002553,3.25e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85568723277549,0,0,2.50707539292375,0.454672189309436,1.87574891109325,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22068853494722,0,0,0 | |||
|short_description=p1@FOXR1 | |||
}} |
Revision as of 10:42, 11 January 2014
Short description: | p1@FOXR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXR1_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | 45bp_to_ENST00000531539_5end |
EntrezGene: | FOXR1 |
HGNC: | 29980 |
UniProt: | Q08AS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.74e-29 | 7 |
germ cell | 2.74e-29 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 4.57e-56 | 8 |
male reproductive organ | 4.07e-41 | 11 |
gonad | 4.43e-22 | 21 |
indifferent external genitalia | 4.43e-22 | 21 |
indifferent gonad | 4.43e-22 | 21 |
gonad primordium | 4.43e-22 | 21 |
external genitalia | 3.99e-21 | 22 |
male organism | 3.99e-21 | 22 |
male reproductive system | 3.99e-21 | 22 |
body cavity | 1.31e-10 | 46 |
reproductive organ | 3.32e-10 | 48 |
body cavity or lining | 5.14e-10 | 49 |
body cavity precursor | 3.61e-09 | 54 |
reproductive structure | 1.83e-08 | 59 |
reproductive system | 1.83e-08 | 59 |
anatomical cavity | 3.25e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.14e-10 | 22 |
germ cell cancer | 4.14e-10 | 22 |