FFCP PHASE1:Hg19::chr12:6575455..6575468,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=6843 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12642 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-17bp_to_ENST00000538970_5end | |||
|description=CAGE_peak_4_at_VAMP1_5end | |||
|id=chr12:6575455..6575468,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000785;1.58e-07;1!CL:0000819;1.58e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,1.01e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;9.51e-10;3!UBERON:0003057;9.51e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.77e-09;3!DOID:127;1.77e-09;3!DOID:0060073;1.58e-07;1!DOID:8675;1.58e-07;1!DOID:0060072;2.59e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.09e-09,3;DOID:127,1.09e-09,3;DOID:0060073,1.01e-07,1;DOID:8675,1.01e-07,1;DOID:0060072,1.80e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.63e-13!57;UBERON:0005068!2.63e-13!57;UBERON:0006241!2.63e-13!57;UBERON:0007135!2.63e-13!57;UBERON:0002616!3.94e-11!59;UBERON:0007023!4.12e-11!115;UBERON:0001017!2.56e-10!82;UBERON:0000955!1.03e-09!69;UBERON:0006238!1.03e-09!69;UBERON:0005743!1.25e-09!86;UBERON:0003076!3.42e-08!15;UBERON:0003057!3.42e-08!15;UBERON:0002020!5.71e-08!34;UBERON:0003528!5.71e-08!34;UBERON:0002780!8.52e-08!41;UBERON:0001890!8.52e-08!41;UBERON:0006240!8.52e-08!41;UBERON:0001893!9.37e-08!34;UBERON:0000073!1.89e-07!94;UBERON:0001016!1.89e-07!94;UBERON:0003080!2.00e-07!42;UBERON:0003075!2.14e-07!86;UBERON:0007284!2.14e-07!86;UBERON:0004733!2.93e-07!12;UBERON:0002028!2.93e-07!12;UBERON:0007277!2.93e-07!12;UBERON:0002791!3.96e-07!33;UBERON:0001950!4.09e-07!20;UBERON:0002619!5.20e-07!22;UBERON:0002346!5.33e-07!90;UBERON:0001869!7.23e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002148;2.23e-13;2!UBERON:0006331;2.23e-13;2!UBERON:0009662;2.23e-13;2!UBERON:0001950;2.14e-10;20!UBERON:0000200;3.94e-10;6!UBERON:0002298;7.30e-10;6!UBERON:0002240;9.51e-10;3!UBERON:0005174;9.51e-10;3!UBERON:0001137;9.51e-10;3!UBERON:0002619;1.92e-09;22!UBERON:0000988;3.25e-09;3!UBERON:0001869;8.92e-09;32!UBERON:0004733;1.92e-08;12!UBERON:0002028;1.92e-08;12!UBERON:0000956;2.74e-08;25!UBERON:0000203;2.74e-08;25!UBERON:0001017;2.81e-08;75!UBERON:0003528;3.20e-08;34!UBERON:0002020;3.20e-08;34!UBERON:0004732;8.40e-08;13!UBERON:0001893;1.44e-07;34!UBERON:0002581;1.58e-07;1!UBERON:0007190;1.58e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.60e-16,56;UBERON:0005068,3.60e-16,56;UBERON:0006241,3.60e-16,56;UBERON:0007135,3.60e-16,56;UBERON:0003076,6.13e-15,15;UBERON:0003057,6.13e-15,15;UBERON:0001017,4.61e-14,81;UBERON:0002148,9.83e-14,2;UBERON:0006331,9.83e-14,2;UBERON:0009662,9.83e-14,2;UBERON:0000955,1.32e-12,68;UBERON:0006238,1.32e-12,68;UBERON:0001016,2.16e-12,89;UBERON:0000073,4.74e-12,53;UBERON:0002616,4.74e-12,53;UBERON:0003075,4.82e-12,82;UBERON:0007284,4.82e-12,82;UBERON:0002346,2.31e-11,86;UBERON:0010371,1.82e-10,104;UBERON:0003528,2.12e-10,34;UBERON:0002020,2.12e-10,34;UBERON:0001950,2.59e-10,20;UBERON:0002298,3.83e-10,6;UBERON:0000200,4.91e-10,6;UBERON:0002240,9.54e-10,3;UBERON:0005174,9.54e-10,3;UBERON:0001137,9.54e-10,3;UBERON:0000988,1.89e-09,3;UBERON:0007023,2.22e-09,114;UBERON:0002619,2.28e-09,22;UBERON:0004733,1.14e-08,12;UBERON:0002028,1.14e-08,12;UBERON:0007277,1.14e-08,12;UBERON:0001869,1.84e-08,32;UBERON:0000956,3.18e-08,25;UBERON:0000203,3.18e-08,25;UBERON:0004732,5.22e-08,13;UBERON:0001893,6.28e-08,34;UBERON:0010314,1.18e-07,132;UBERON:0002581,1.48e-07,1;UBERON:0007190,2.63e-07,1;UBERON:0004121,5.29e-07,171;UBERON:0000924,5.29e-07,171;UBERON:0006601,5.29e-07,171;UBERON:0002680,6.99e-07,9;UBERON:0001895,6.99e-07,9;UBERON:0010092,6.99e-07,9 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.662794751455832,0,0.602694528023977,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0.305653622991805,0.246301768349837,0.236132343941038,0.393364276848904,0,0.154816123316076,0,0,0,0.154934401160603,0.568676929949686,0,0,0.401088894940283,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,1.35426486594342,0,0,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0,0.426224750532694,0,0,0,0.502497330513487,0,0.217188844705117,0,0,0,0,0,0,0,0.300353785683013,0,0,0.19891667719909,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0.786021525498329,0.616804496998528,0.167186495390678,0,0,0,0,1.17842362989935,0,0.270803863765016,0.512365278902701,0.390178042679635,0.493313713811028,0,0.869409257205157,0.889719378972363,0.267540828089713,0,0.339928028092699,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0,2.40696176205157,0.434473211648397,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0.261958150995425,0,0,0,0,0.132957960518865,0.238490624305342,1.14398982156026,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.336672227908132,0.250237039743928,0,0,0.612975591598039,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,2.16563844500876,0.118306800039844,0,0.482022059766964,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,1.03993478527958,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.602878754119172,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0,0.224170287987055,0.394061520403854,0.431255149719035,0.256686072559497,0,0,0,0,0.637938751653163,0.749007023947182,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.213455115606889,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0,0,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0.290033387828457,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0.42793898803392,0,0,0,0,0,0,3.17020642346017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.633322905892992,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0.476463550915578,0.411362273086194,0,0.540031437238115,1.58625035258854,0,0,0,0.185803175125719,0,0,0,0.199579371432817,0,0.423347165447766,0,0,0,0.156679895773023,0,0,0,0,0,0.687010689511529,0,0,0,0.19538809540204,0.278406173895242,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0.211125408127993,0.597743964753209,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0,0.0986434056369336,0,0,1.93866549219044,1.29875337426592,0,0.260427761085233,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0.120596438625408,1.52581736317083,0.331737779793674,0.591095237907095,0.438770794307945,0,0,0,0,0,0.269272933229316,0,0.31900115973192,0.0915975934018623,0.533034776018635,2.04386596391473,0,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.337005664903385,0,0.468528891450678,1.64209310294099,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0.867798691675654,0,0,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.246346371159628,0,0,0,0,0,0.379864775735272,0,0,0.213452994739353,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0.429765441419957,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0.0984274815147488,0,0,0.272406812223151,0.321506296930038,0.137539436597234,0,0,0,0.0607495566580247,0.335434687599266,0,0,0,0.35857467866569,0,0,0,0.25426853765475,2.71499800876856,1.72844298240254,0.326587360109409,0,0,0.170388021785422,0,0,0,1.42211251997706,1.85125642439766,0,0,0,0.157204305099666,0.828478110694391,0,0,0.243585196761792,0,0,0,0,0,0,0,5.24712939078442,0.751145584238999,0.573409195690071,1.66393577305278,0.745156835296601,0,0,0,0,0.235265819698172,0,0,0,0,0,0.568209015825267,0.50313580350515,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0.829550616910385,0.194860308839388,0,0,0.327609848846413,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0.157723490002507,0,0,0,0.321146125482298,1.41696576325585,0.159633859057151,4.30744364905586,0,0.899044282034833,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| |||
|short_description=p4@VAMP1 | |||
}} |
Revision as of 11:40, 11 January 2014
Short description: | p4@VAMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_4_at_VAMP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000538970_5end |
EntrezGene: | VAMP1 |
HGNC: | 12642 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 1.01e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.09e-09 | 3 |
leiomyoma | 1.09e-09 | 3 |
lymphatic system cancer | 1.01e-07 | 1 |
lymphosarcoma | 1.01e-07 | 1 |
benign neoplasm | 1.80e-07 | 4 |