FFCP PHASE1:Hg19::chr12:6579808..6579815,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6843 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12642 | |||
|TSSclassifier=strong | |||
|UniProt=F5GZV7 | |||
|association_with_transcript=0bp_to_ENST00000535180_5end | |||
|coexpression_cluster_id=C247 | |||
|description=CAGE_peak_2_at_VAMP1_5end | |||
|id=chr12:6579808..6579815,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.48e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.44e-19!57;UBERON:0005068!4.44e-19!57;UBERON:0006241!4.44e-19!57;UBERON:0007135!4.44e-19!57;UBERON:0007023!5.00e-18!115;UBERON:0002616!1.08e-16!59;UBERON:0000955!1.82e-16!69;UBERON:0006238!1.82e-16!69;UBERON:0003080!1.28e-15!42;UBERON:0002780!3.49e-15!41;UBERON:0001890!3.49e-15!41;UBERON:0006240!3.49e-15!41;UBERON:0001017!1.23e-14!82;UBERON:0005743!1.21e-13!86;UBERON:0000073!2.60e-13!94;UBERON:0001016!2.60e-13!94;UBERON:0002020!4.47e-13!34;UBERON:0003528!4.47e-13!34;UBERON:0001893!5.57e-13!34;UBERON:0003075!1.63e-12!86;UBERON:0007284!1.63e-12!86;UBERON:0002791!2.70e-12!33;UBERON:0002346!4.11e-12!90;UBERON:0001869!5.94e-12!32;UBERON:0003056!3.05e-09!61;UBERON:0002619!9.20e-09!22;UBERON:0000956!2.73e-08!25;UBERON:0000203!2.73e-08!25;UBERON:0001950!5.37e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.57e-29;20!UBERON:0001869;2.26e-27;32!UBERON:0003528;4.09e-27;34!UBERON:0002020;4.09e-27;34!UBERON:0002619;4.28e-26;22!UBERON:0001893;1.45e-25;34!UBERON:0002791;3.92e-24;32!UBERON:0002780;6.59e-23;41!UBERON:0001890;6.59e-23;41!UBERON:0000956;1.33e-22;25!UBERON:0000203;1.33e-22;25!UBERON:0000073;1.36e-20;53!UBERON:0002616;1.36e-20;53!UBERON:0000200;4.59e-18;6!UBERON:0000955;7.41e-17;68!UBERON:0001017;9.23e-17;75!UBERON:0002298;1.82e-16;6!UBERON:0001016;1.41e-10;83!UBERON:0000125;2.31e-10;9!UBERON:0002308;2.31e-10;9!UBERON:0002021;3.22e-10;5!UBERON:0001872;6.59e-10;5!UBERON:0001870;1.08e-09;3!UBERON:0004732;1.49e-09;13!UBERON:0000988;1.69e-09;3!UBERON:0001896;1.12e-08;3!UBERON:0005290;1.12e-08;3!UBERON:0007023;3.09e-08;114!UBERON:0004733;7.43e-08;12!UBERON:0002028;7.43e-08;12!UBERON:0002784;3.03e-07;4!UBERON:0002771;4.20e-07;2!UBERON:0002702;5.23e-07;2!UBERON:0001894;5.95e-07;7!UBERON:0001905;7.19e-07;2!UBERON:0002757;7.19e-07;2!UBERON:0010134;7.19e-07;2!UBERON:0005408;7.19e-07;2!UBERON:0001899;7.19e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.67e-44,56;UBERON:0005068,1.67e-44,56;UBERON:0006241,1.67e-44,56;UBERON:0007135,1.67e-44,56;UBERON:0000073,4.38e-41,53;UBERON:0002616,4.38e-41,53;UBERON:0000955,1.35e-34,68;UBERON:0006238,1.35e-34,68;UBERON:0002780,3.07e-34,41;UBERON:0001890,3.07e-34,41;UBERON:0003080,3.07e-34,41;UBERON:0006240,3.07e-34,41;UBERON:0001017,3.67e-34,81;UBERON:0003528,8.90e-32,34;UBERON:0002020,8.90e-32,34;UBERON:0001016,8.91e-32,89;UBERON:0003075,1.01e-31,82;UBERON:0007284,1.01e-31,82;UBERON:0001869,8.66e-31,32;UBERON:0002346,8.13e-30,86;UBERON:0001950,5.09e-29,20;UBERON:0001893,1.07e-28,34;UBERON:0002791,1.79e-27,32;UBERON:0002619,3.94e-26,22;UBERON:0003056,5.20e-25,61;UBERON:0007023,1.84e-23,114;UBERON:0010371,4.65e-23,104;UBERON:0000956,1.24e-22,25;UBERON:0000203,1.24e-22,25;UBERON:0000200,3.99e-18,6;UBERON:0010314,1.62e-17,132;UBERON:0002298,5.88e-17,6;UBERON:0004121,3.74e-13,171;UBERON:0000924,3.74e-13,171;UBERON:0006601,3.74e-13,171;UBERON:0003076,3.56e-11,15;UBERON:0003057,3.56e-11,15;UBERON:0000125,1.37e-10,9;UBERON:0002308,1.37e-10,9;UBERON:0002021,3.10e-10,5;UBERON:0001872,5.61e-10,5;UBERON:0004732,7.83e-10,13;UBERON:0001870,8.69e-10,3;UBERON:0000988,1.03e-09,3;UBERON:0011216,2.65e-09,223;UBERON:0001896,5.89e-09,3;UBERON:0005290,5.89e-09,3;UBERON:0010096,5.89e-09,3;UBERON:0004733,4.39e-08,12;UBERON:0002028,4.39e-08,12;UBERON:0007277,4.39e-08,12;UBERON:0000025,9.09e-08,192;UBERON:0002784,3.53e-07,4;UBERON:0002771,4.29e-07,2;UBERON:0002702,4.42e-07,2;UBERON:0001894,6.77e-07,7;UBERON:0006222,6.77e-07,7;UBERON:0002148,7.02e-07,2;UBERON:0006331,7.02e-07,2;UBERON:0009662,7.02e-07,2;UBERON:0001905,8.34e-07,2;UBERON:0002757,8.34e-07,2;UBERON:0010134,8.34e-07,2;UBERON:0005408,8.34e-07,2;UBERON:0001899,8.34e-07,2 | |||
|phase1_expression=0,0.428201047781966,0.563817616383885,0,0,0,0,0,1.04474251279935,0,0,0.218441372130172,0,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0.410623275218653,0.251085279189606,0.305653622991805,0.0821005894499457,0.157421562627358,0,0,0.309632246632152,0,0,0,0.852139206383318,0.710846162437108,0,0.553995408531877,0.802177789880567,0.217010870715852,0.223915474239924,0,0.257575567634187,0,1.13362783106643,0,0.929716147622738,0,0,0.28769239232215,0.512321413058201,0,1.03423704220986,0.645484683583826,0,0,0.545812300115692,0.449446968890169,0.612167784741805,0,0,0,0.398927315243264,0,0.290209238628584,1.13477044938228,0,1.00499466102697,1.0429658368404,0,1.21079900526674,0,0.316462387440884,0,0,0,0,0.150176892841506,0.32145117339416,0,0.59675003159727,0,0,0,0,0,0,0,0.661044872784862,0,1.1384259382189,0.587237189370939,0,0,0,0.263384084775077,0.786839080455332,1.17903228824749,0.616804496998528,0.334372990781356,0,1.4203434172042,0,0.111410456885174,0,0.886135578334485,0.541607727530031,0.768547918354051,0.650296737799391,1.64437904603676,0.552700035571697,0,0.14828656316206,0.802622484269139,1.04535523804977,0.113309342697566,0,1.37450978193052,1.01207876807801,0.318565414324097,0,0,0.150575119077773,0.127986611154418,1.24930726552346,0.710331756132051,0,0.604820229674197,1.87208137048455,1.30341963494519,0,0,0,0,0.50133791063589,0.579386075843295,0,0,0,0,0.263504357079378,0.785874452986276,0,0,0,0,0.132957960518865,1.19245312152671,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0.24666754841716,0,0,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,1.43723628363248,0,0,0,0,0,0,0.113432183160021,0.717558542755448,0.213557388818567,0.423863802319124,0.600182192168805,0.103052529238439,0,0.37223371266318,0.506328996723799,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0,0.339121184620975,0,0,0,0.731842236777572,0.795178609928912,0.813357600086629,0.829288440122964,0.756962552626885,0.72995471815166,0,0,0,0.928735856063958,0,0.118306800039844,0.505754070234305,0,0.110293972732394,0.217879444092406,0,0.404493924480493,0,0,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.702012795417713,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.432359860250884,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0,3.57656445851882,0,0,0,0,1.41849132023278,0.266422179016099,0.57191197463259,0,0,0,0,0.791951872933429,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0.821905290201534,0.537182889719687,0.224170287987055,0.788123040807709,1.72502059887614,1.92514554419623,0,0,0,0,0,0.749007023947182,2.99161459204025,0.414415513436035,0.24538298343828,0,0,0,0,0.788512075169673,0.35142424497814,0,0,1.03473071292505,0,0.553107505625109,0.173767228936166,0.195801157462741,0.686286847621712,0.82707210449155,0,0,0,0,0.30239029332968,0,0.306923946576125,0,0.384417447767103,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0,0.27470839445503,0.247528499761764,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0.765676274967505,0.10115778085555,0,0.62962469366128,0.6970372701606,0,0,0,0.37064843820784,0,0.372158369359667,0,0.571890581771475,0,0,0,0,0.179872457583315,0.823611089208164,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0,0,0,0.443430153536676,0.229723400206959,0.507447609232169,0,1.13929437434833,0,0.411362273086194,0,0.540031437238115,0,0.640944426764839,0,0,0,0.144269212976445,0.284567373393656,0,0,0.191505370132367,0.635020748171649,0,0,0.456469358066384,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0.18714054040822,0,0.242721043499027,0.111443384277478,0,0,0.296964680832639,0,0,0.844016498463076,0.111308705022906,0.659215496907038,2.11125408127993,0.996239941255349,0.552567831062295,0,0.306806047506464,0.615424027305347,0,0.0898683511473268,0,0,0.295930216910801,0,0,4.84666373047609,7.0503754603007,0,0,0.437299999980979,0.724999575434793,0,0,0,0.689486746482929,0,0,1.77148277162768,1.08536794762867,0,0.884634079449797,0.295547618953547,1.75508317723178,0.435753854075961,0.278847488557207,0.153900517007594,0.455768223388005,0.23056390438806,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0.332423363800313,0.451191321234361,0,0,0,0,0.210998064528027,0.163232808159148,0.141353071433941,0.432777279484182,0.995261931078505,0.0884575645033392,0.611030144933625,0.296521128680622,0.123563938946503,0.417687798021821,0.943615861729479,0,3.51396668588009,0,0.391329237864179,0,0,0,0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| |||
|short_description=p2@VAMP1 | |||
}} |
Revision as of 11:40, 11 January 2014
Short description: | p2@VAMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VAMP1_5end |
Coexpression cluster: | C247_pons_locus_medulla_spinal_paracentral_medial_occipital |
Association with transcript: | 0bp_to_ENST00000535180_5end |
EntrezGene: | VAMP1 |
HGNC: | 12642 |
UniProt: | F5GZV7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data