FFCP PHASE1:Hg19::chr12:28343365..28343414,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55297 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24855 | |||
|TSSclassifier=strong | |||
|UniProt=F5H1Z3 | |||
|association_with_transcript=0bp_to_ENST00000536442,ENST00000544649,ENST00000544780,ENST00000545336_5end | |||
|description=CAGE_peak_1_at_CCDC91_5end | |||
|id=chr12:28343365..28343414,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.39e-11!53;CL:0000051!1.39e-11!53;CL:0000838!1.73e-11!52;CL:0000791!6.62e-11!18;CL:0000789!6.62e-11!18;CL:0002420!6.62e-11!18;CL:0002419!6.62e-11!18;CL:0000790!6.62e-11!18;CL:0000084!2.59e-08!25;CL:0000827!2.59e-08!25;CL:0000625!5.43e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.33e-11;18!CL:0000789;6.33e-11;18!CL:0002419;6.33e-11;18!CL:0000084;2.26e-08;25!CL:0000625;5.73e-08;11!CL:0000542;2.36e-07;53!CL:0000236;6.61e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.39e-11,53;CL:0000051,1.39e-11,53;CL:0000838,1.73e-11,52;CL:0000791,6.62e-11,18;CL:0000789,6.62e-11,18;CL:0002420,6.62e-11,18;CL:0002419,6.62e-11,18;CL:0000790,6.62e-11,18;CL:0000084,2.59e-08,25;CL:0000827,2.59e-08,25;CL:0000625,5.43e-08,11;CL:0002031,5.78e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;6.33e-11;18!CL:0000051;2.36e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.30e-26!115;UBERON:0001049!1.30e-13!57;UBERON:0005068!1.30e-13!57;UBERON:0006241!1.30e-13!57;UBERON:0007135!1.30e-13!57;UBERON:0003080!4.09e-12!42;UBERON:0002780!4.97e-12!41;UBERON:0001890!4.97e-12!41;UBERON:0006240!4.97e-12!41;UBERON:0002616!6.44e-11!59;UBERON:0000073!5.48e-10!94;UBERON:0001016!5.48e-10!94;UBERON:0000955!6.27e-10!69;UBERON:0006238!6.27e-10!69;UBERON:0001017!2.64e-09!82;UBERON:0002020!3.73e-09!34;UBERON:0003528!3.73e-09!34;UBERON:0001893!7.56e-09!34;UBERON:0005743!9.95e-09!86;UBERON:0002791!1.67e-08!33;UBERON:0001869!1.69e-08!32;UBERON:0002619!3.54e-07!22;UBERON:0003075!3.70e-07!86;UBERON:0007284!3.70e-07!86;UBERON:0002346!4.15e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.06e-08;41!UBERON:0001890;1.06e-08;41!UBERON:0003528;7.73e-08;34!UBERON:0002020;7.73e-08;34!UBERON:0001869;1.11e-07;32!UBERON:0000073;1.16e-07;53!UBERON:0002616;1.16e-07;53!UBERON:0001893;1.30e-07;34!UBERON:0002791;1.34e-07;32!UBERON:0007023;1.81e-07;114!UBERON:0002619;4.61e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.34e-26,114;UBERON:0001049,1.63e-13,56;UBERON:0005068,1.63e-13,56;UBERON:0006241,1.63e-13,56;UBERON:0007135,1.63e-13,56;UBERON:0000073,1.18e-12,53;UBERON:0002616,1.18e-12,53;UBERON:0002780,4.97e-12,41;UBERON:0001890,4.97e-12,41;UBERON:0003080,4.97e-12,41;UBERON:0006240,4.97e-12,41;UBERON:0001016,1.82e-10,89;UBERON:0000955,8.19e-10,68;UBERON:0006238,8.19e-10,68;UBERON:0001017,3.46e-09,81;UBERON:0003528,3.73e-09,34;UBERON:0002020,3.73e-09,34;UBERON:0001893,7.56e-09,34;UBERON:0001869,1.69e-08,32;UBERON:0002791,2.14e-08,32;UBERON:0003075,2.32e-07,82;UBERON:0007284,2.32e-07,82;UBERON:0002346,2.69e-07,86;UBERON:0002619,3.54e-07,22 | |||
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| |||
|short_description=p1@CCDC91 | |||
}} |
Revision as of 12:49, 11 January 2014
Short description: | p1@CCDC91 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC91_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536442, ENST00000544649, ENST00000544780, ENST00000545336_5end |
EntrezGene: | CCDC91 |
HGNC: | 24855 |
UniProt: | F5H1Z3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.39e-11 | 53 |
common lymphoid progenitor | 1.39e-11 | 53 |
lymphoid lineage restricted progenitor cell | 1.73e-11 | 52 |
mature alpha-beta T cell | 6.62e-11 | 18 |
alpha-beta T cell | 6.62e-11 | 18 |
immature T cell | 6.62e-11 | 18 |
mature T cell | 6.62e-11 | 18 |
immature alpha-beta T cell | 6.62e-11 | 18 |
T cell | 2.59e-08 | 25 |
pro-T cell | 2.59e-08 | 25 |
CD8-positive, alpha-beta T cell | 5.43e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 5.78e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.34e-26 | 114 |
neural tube | 1.63e-13 | 56 |
neural rod | 1.63e-13 | 56 |
future spinal cord | 1.63e-13 | 56 |
neural keel | 1.63e-13 | 56 |
regional part of nervous system | 1.18e-12 | 53 |
regional part of brain | 1.18e-12 | 53 |
regional part of forebrain | 4.97e-12 | 41 |
forebrain | 4.97e-12 | 41 |
anterior neural tube | 4.97e-12 | 41 |
future forebrain | 4.97e-12 | 41 |
nervous system | 1.82e-10 | 89 |
brain | 8.19e-10 | 68 |
future brain | 8.19e-10 | 68 |
central nervous system | 3.46e-09 | 81 |
brain grey matter | 3.73e-09 | 34 |
gray matter | 3.73e-09 | 34 |
telencephalon | 7.56e-09 | 34 |
cerebral hemisphere | 1.69e-08 | 32 |
regional part of telencephalon | 2.14e-08 | 32 |
neural plate | 2.32e-07 | 82 |
presumptive neural plate | 2.32e-07 | 82 |
neurectoderm | 2.69e-07 | 86 |
regional part of cerebral cortex | 3.54e-07 | 22 |