FFCP PHASE1:Hg19::chr12:53068552..53068579,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C626 | |||
|description=CAGE_peak_at_chr12:53068552..53068579,- | |||
|id=chr12:53068552..53068579,- | |||
|ontology_enrichment_celltype=CL:0001014!4.08e-26!2;CL:0001016!4.08e-26!2;CL:0000453!4.79e-11!5;CL:0002274!8.29e-11!5;CL:0000457!8.29e-11!5;CL:0002191!8.29e-11!5;CL:0000097!8.29e-11!5;CL:0000831!8.29e-11!5;CL:0002028!8.29e-11!5;CL:0000840!2.35e-09!5;CL:0001029!2.35e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0001014;5.04e-34;2!CL:0001016;5.04e-34;2!CL:0002623;4.09e-23;3!CL:0000453;1.60e-14;5!CL:0000622;1.83e-14;5!CL:0000840;2.45e-12;5!CL:0000154;2.74e-12;6!CL:0000990;1.12e-08;8!CL:0000150;1.21e-08;9!CL:0000451;2.47e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.04e-34,2;CL:0001016,5.04e-34,2;CL:0002623,4.09e-23,3;CL:0000453,1.60e-14,5;CL:0000622,1.83e-14,5;CL:0000840,2.45e-12,5;CL:0001029,2.45e-12,5;CL:0000154,2.74e-12,6;CL:0000990,1.12e-08,8;CL:0000150,1.21e-08,9;CL:0000451,2.47e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.23e-66;1 | |||
|ontology_enrichment_disease=DOID:3151!6.65e-14!1;DOID:3149!6.65e-14!1;DOID:3451!1.36e-07!2;DOID:4159!1.36e-07!2;DOID:0060122!1.36e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000989!3.08e-14!1;UBERON:0008811!3.08e-14!1;UBERON:0006258!3.08e-14!1;UBERON:0005876!3.08e-14!1;UBERON:0004874!3.08e-14!1;UBERON:0007029!4.53e-14!1;UBERON:0000014!1.34e-13!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;1.23e-66;1!UBERON:0008811;1.23e-66;1!UBERON:0001044;2.74e-12;6!UBERON:0003293;2.74e-12;6!UBERON:0003294;2.74e-12;6!UBERON:0010047;2.74e-12;6!UBERON:0003408;2.74e-12;6!UBERON:0000167;2.74e-12;6!UBERON:0003135;2.32e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,1.23e-66,1;UBERON:0008811,1.23e-66,1;UBERON:0006258,1.23e-66,1;UBERON:0005876,1.23e-66,1;UBERON:0004874,1.23e-66,1;UBERON:0001044,2.74e-12,6;UBERON:0003293,2.74e-12,6;UBERON:0003294,2.74e-12,6;UBERON:0010047,2.74e-12,6;UBERON:0000167,2.74e-12,6;UBERON:0003408,6.56e-08,10;UBERON:0003135,2.32e-07,11;UBERON:0004876,2.32e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,3.0952078182318,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4204347461752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:53068552..53068579,- | |||
}} |
Revision as of 13:38, 11 January 2014
Short description: | p@chr12:53068552..53068579, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:53068552..53068579, - |
Coexpression cluster: | C626_penis_skeletal_tongue_diaphragm_salivary_throat_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.04e-34 | 2 |
immature CD1a-positive Langerhans cell | 5.04e-34 | 2 |
acinar cell of salivary gland | 4.09e-23 | 3 |
Langerhans cell | 1.60e-14 | 5 |
acinar cell | 1.83e-14 | 5 |
immature conventional dendritic cell | 2.45e-12 | 5 |
common dendritic progenitor | 2.45e-12 | 5 |
protein secreting cell | 2.74e-12 | 6 |
conventional dendritic cell | 1.12e-08 | 8 |
glandular epithelial cell | 1.21e-08 | 9 |
dendritic cell | 2.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
penis | 1.23e-66 | 1 |
intromittent organ | 1.23e-66 | 1 |
lateral plate mesenchyme | 1.23e-66 | 1 |
undifferentiated genital tubercle | 1.23e-66 | 1 |
somatopleure | 1.23e-66 | 1 |
saliva-secreting gland | 2.74e-12 | 6 |
gland of oral region | 2.74e-12 | 6 |
gland of foregut | 2.74e-12 | 6 |
oral gland | 2.74e-12 | 6 |
oral cavity | 2.74e-12 | 6 |
gland of gut | 6.56e-08 | 10 |
male reproductive organ | 2.32e-07 | 11 |
urogenital ridge | 2.32e-07 | 11 |