FFCP PHASE1:Hg19::chr12:54678084..54678105,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:54678084..54678105,+ | |||
|id=chr12:54678084..54678105,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.24e-07!182;CL:0002032!1.33e-07!165;CL:0000837!1.33e-07!165;CL:0000037!1.36e-07!172;CL:0000566!1.36e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000785;7.43e-11;1!CL:0000819;7.43e-11;1!CL:0000081;1.87e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,1.33e-10,1;CL:0000081,2.27e-08,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.48e-12!235;DOID:14566!5.00e-12!239;DOID:0050687!1.53e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:0060073;7.43e-11;1!DOID:8675;7.43e-11;1!DOID:12603;7.43e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,3.41e-11,1;DOID:0060073,1.33e-10,1;DOID:8675,1.33e-10,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;7.43e-11;1!UBERON:0000026;7.43e-11;1!UBERON:0008784;7.43e-11;1!UBERON:0006058;7.43e-11;1!UBERON:0003663;7.43e-11;1!UBERON:0004256;7.43e-11;1!UBERON:0004708;7.43e-11;1!UBERON:0002101;7.43e-11;1!UBERON:0004709;7.43e-11;1!UBERON:0002529;7.43e-11;1!UBERON:0010538;7.43e-11;1!UBERON:0003661;7.43e-11;1!UBERON:0010890;7.43e-11;1!UBERON:0002471;7.43e-11;1!UBERON:0001383;7.43e-11;1!UBERON:0010758;7.43e-11;1!UBERON:0010707;7.43e-11;1!UBERON:0000978;7.43e-11;1!UBERON:0002103;7.43e-11;1!UBERON:0001665;7.43e-11;1!UBERON:0003823;7.43e-11;1!UBERON:0000154;7.43e-11;1!UBERON:0010709;7.43e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,7.46e-11,1;UBERON:0001389,7.46e-11,1;UBERON:0000026,7.46e-11,1;UBERON:0008784,7.46e-11,1;UBERON:0006058,7.46e-11,1;UBERON:0003663,7.46e-11,1;UBERON:0004256,7.46e-11,1;UBERON:0004708,7.46e-11,1;UBERON:0002101,7.46e-11,1;UBERON:0004709,7.46e-11,1;UBERON:0002529,7.46e-11,1;UBERON:0010538,7.46e-11,1;UBERON:0003661,7.46e-11,1;UBERON:0010890,7.46e-11,1;UBERON:0002471,7.46e-11,1;UBERON:0001383,7.46e-11,1;UBERON:0004357,7.46e-11,1;UBERON:0004347,7.46e-11,1;UBERON:0005420,7.46e-11,1;UBERON:0005732,7.46e-11,1;UBERON:0010758,7.46e-11,1;UBERON:0010707,7.46e-11,1;UBERON:0000978,7.46e-11,1;UBERON:0002103,7.46e-11,1;UBERON:0001665,7.46e-11,1;UBERON:0003823,7.46e-11,1;UBERON:0000154,7.46e-11,1;UBERON:0010709,7.46e-11,1;UBERON:0005733,7.46e-11,1;UBERON:0005730,7.46e-11,1 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.410623275218653,0,0.229240217243854,0.0821005894499457,0.236132343941038,0,0,0.928896739896456,0,0,0,0.232401601740905,0.284338464974843,0,0,0.200544447470142,0,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0.485168122375632,0.464858073811369,0,0.309706370895104,0.575384784644301,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0.564727018627814,0,0,0,0,0.639337125799041,0.659702600373432,0,0.852449501065388,0,0,0,0.502497330513487,0.521482918420201,0,0,0.368277635987565,0,0,0.212604299965044,0,0.22465726229299,0.150176892841506,0.16072558669708,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,1.52909291250092,0,0,0.263384084775077,0.786839080455332,1.57204305099666,0.616804496998528,0,0.651844533267181,0.473447805734733,0,0.111410456885174,0,0.443067789167242,0.812411591295047,0.25618263945135,0,0,0.276350017785848,0,0.741432815810302,0,0,0.226618685395132,0.383220493601921,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0.403213486449465,0,0.579297615531196,0,0,0,0,0,0,0.795285947051099,0,0.189069634328136,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0.953962497221368,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0.760272105718513,0.24406205754817,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0.408308342509787,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.717558542755448,0.213557388818567,0,0.300091096084402,0.206105058476878,0.257640540045629,0.37223371266318,0.337552664482532,0,0,0,0.161646056818812,0.710019185033229,0.201504196455281,0.339121184620975,0,0,0,0.487894824518382,0,0.116193942869518,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0,0.473227200159376,0,0.241011029883482,0.55146986366197,0.435758888184812,0.71181185733329,0,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0.368965315629341,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0.190254152234598,0.790204397959275,0,0.246217006087397,0,0,0,0,0.141775097242386,0,0,0,0,0.176096868026452,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0.845302752556,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0.336255431980582,0.197030760201927,1.07813787429759,0.513372145118994,0.254094624222463,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.640365346820666,0,0,0,0.248107807818777,0,0.561320188866147,0.128139149255701,0,0,0,0,0,0,0,0,0.362578348774867,0,0.552485933615378,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0.650060246036521,0,0,0.154048617114644,0.307007349452259,0,0.322260734604821,0.435050081742686,0.0852266274161009,0,0.165284915360978,0,0.382838137483752,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0.48763373908959,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.86101074534246,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0.213648142254946,0,0.490080431962063,1.85803175125719,0.432807638929335,0.142283686696828,0.318852545457645,0.59873811429845,0.191505370132367,1.48171507906718,0.973865820823666,0.280797178113459,0.228234679033192,1.25343916618419,0,0,0.642352300414798,1.81619736471943,0,0,0,0.223676107892416,0,0.586164286206121,0.278406173895242,0,0,0.33307196799782,1.4098700508785,0,0,0,0.222886768554957,0,0,0,0,0.994147647766298,0.140669416410513,0.111308705022906,0.329607748453519,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,1.99613798001194,0,0.0874599999961957,0,0.227586896570999,0,0.236387681767936,0.344743373241465,0.291604613383254,0.347249989866585,0,0.361789315876224,0,0,0.295547618953547,0,0.21787692703798,0.278847488557207,0,0.113942055847001,0,0.0897576444097721,0.54323685961004,0.638002319463839,0,0.533034776018635,0,0,0.498635045700469,0,0.19606253431774,0.167821586975843,0.189753732724185,0.158936578980379,0.210998064528027,0,0.424059214301822,0,0,0,0,1.18608451472249,0.247127877893006,0.626531697032732,0,0.802577647298789,0,1.094728735294,0.19566461893209,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0.284609546029793,0.416024019039416,0.347119476670262,0.0979923974143777,0.0870592065804026,0,0.171986032471617,0.387025325156341,0.219267951258557,0.410577285266046,0,0.0882561266915003,0,0,0,0,1.17330829640882,0,0,0.599428828746391,0.288180834308212,0,0.171594997861965,0.288109595976299,0,0.235694034616795,0.135904206073614,0.209205692624666,0.203996435272644,0,0,0,0,0.429765441419957,0.788662062837943,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0,0.164831716762333,0.337017719270924,0.688992370603241,0.169346664131569,0,0,0.482259445395058,0.412618309791701,0.415440338029185,0.449947783103001,0.77380195455795,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0.410462603746695,0.340776043570843,0.226624183040251,0,0,0.129282956361551,0.26446520348538,0.171086837884329,0,0,0.314408610199332,0.414239055347196,0,0,0.243585196761792,0.638341257770182,0,0,0,0,0,0,2.07444650333337,0.1251909307065,0.573409195690071,0,0.0620964029413835,0.553394539744923,0.124980407962107,0,0.285465333544967,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0.414706207840855,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0.453411851024545,0.463044948647668,1.46842022703881,0,0.308801447160972,0,0.176689145945881,0.578742114812744,0.506827321959218,0.256241518587947,0.345430341731199,0,0,0.389720617678777,0.132864840313363,0,0.327609848846413,0,0,0,0.320075189082423,0.344429959321631,0,0.368211900503681,0,0,0,0.431299245586727,0.471797825567689,0.218419276384028,0,0.850299680406731,0.371807292777007,0,0,0.315446980005013,0.80057074828547,0,0,0.0642292250964595,0,0.159633859057151,0,1.00828678488687,0,0.484426936895553,0,0.196295437002051,0.11796972334774,0.183428598521679,0.346576998451015,0.381382095467167,0,0,0,0.40341013740704,0,0.261906694481422,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0.527613733078862,0.127762427639595,0.535701835878287,0,0,0.227662191351298,0,0.230467975111559,0,0.203909198930495,0,0.709163045303809,0.333694205676207,0,0.471346769748006,0.280272163313789,0,0,0,0,0.316027223465453,0,0.173858272302579,0,0,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0.423387050190929,0.68732060563215,0,0,0.447421727191169,0.196300467230486,0.365753774946808,1.29485767437579,0.102662806856247,0,0.971421986118279,0,0.198950775161368,0.356760272332706,0.33883824611688,0.659643100472575,0.301925687133347,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.392616934229891,0,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0.199882311849858,0.535661815816973,0.352894871715692,0.240724100067505,0,0,0.573358332605805,0.473314686579554,0,0.436350690340377,0,0,0.462175628631418,0.865253124247578,0.252332849670158,0,0,0.203977659483963,0,0.0918948995348449,0.250707539292375,0.0757786982182394,0,0,0,0,0.714193294391221,0,0.124149428591716,0.33639558774184,0.190941474834495,0,0,0,0,0,0.332660356546013,0,0.320182037633146,0,0.179650404213174,0,0,0,0,0,0.641136984606466 | |||
|short_description=p@chr12:54678084..54678105,+ | |||
}} |
Revision as of 13:49, 11 January 2014
Short description: | p@chr12:54678084..54678105, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:54678084..54678105, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 1.33e-10 | 1 |
blood cell | 2.27e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 7.46e-11 | 1 |
soleus muscle | 7.46e-11 | 1 |
appendage | 7.46e-11 | 1 |
lower limb segment | 7.46e-11 | 1 |
multi-limb segment region | 7.46e-11 | 1 |
hindlimb muscle | 7.46e-11 | 1 |
hindlimb zeugopod muscle | 7.46e-11 | 1 |
paired limb/fin | 7.46e-11 | 1 |
limb | 7.46e-11 | 1 |
pelvic appendage | 7.46e-11 | 1 |
limb segment | 7.46e-11 | 1 |
paired limb/fin segment | 7.46e-11 | 1 |
limb muscle | 7.46e-11 | 1 |
pelvic complex muscle | 7.46e-11 | 1 |
zeugopod | 7.46e-11 | 1 |
muscle of leg | 7.46e-11 | 1 |
paired limb/fin bud | 7.46e-11 | 1 |
limb bud | 7.46e-11 | 1 |
pelvic appendage bud | 7.46e-11 | 1 |
limb/fin field | 7.46e-11 | 1 |
subdivision of organism along appendicular axis | 7.46e-11 | 1 |
appendage girdle complex | 7.46e-11 | 1 |
leg | 7.46e-11 | 1 |
hindlimb | 7.46e-11 | 1 |
triceps surae | 7.46e-11 | 1 |
hindlimb zeugopod | 7.46e-11 | 1 |
posterior region of body | 7.46e-11 | 1 |
pelvic complex | 7.46e-11 | 1 |
limb field | 7.46e-11 | 1 |
hindlimb/pelvic fin field | 7.46e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 3.41e-11 | 1 |
lymphatic system cancer | 1.33e-10 | 1 |
lymphosarcoma | 1.33e-10 | 1 |