FFCP PHASE1:Hg19::chr12:56349406..56349415,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_at_chr12:56349406..56349415,- | |||
|id=chr12:56349406..56349415,- | |||
|ontology_enrichment_celltype=CL:0000148!4.02e-94!10;CL:0000541!4.02e-94!10;CL:0000147!4.74e-81!14;CL:0000710!1.91e-46!20;CL:0000075!4.60e-34!27;CL:0002322!5.65e-30!5;CL:0002567!6.17e-30!3;CL:0000325!4.04e-28!39;CL:0002077!1.27e-27!33;CL:0000333!7.12e-21!41;CL:0000133!2.57e-17!59;CL:0000221!3.40e-14!71;CL:0002566!5.05e-11!1;CL:0000149!8.23e-11!4 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.52e-106;10!CL:0000147;3.18e-99;14!CL:0002567;3.76e-66;3!CL:0000710;2.04e-53;20!CL:0000075;1.29e-39;27!CL:0002077;1.01e-27;34!CL:0002566;4.59e-23;1!CL:0000149;5.14e-23;4!CL:0002586;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.78e-106,10;CL:0000541,1.78e-106,10;CL:0000147,2.98e-99,14;CL:0002567,3.01e-66,3;CL:0000710,2.21e-53,20;CL:0000075,1.37e-39,27;CL:0002077,1.82e-31,34;CL:0000333,6.79e-25,41;CL:0000149,4.11e-23,4;CL:0002566,5.13e-23,1;CL:0000133,1.50e-17,59;CL:0000221,1.87e-14,72;CL:0002586,1.21e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000133;1.38e-09;59!CL:0000221;4.56e-08;72 | |||
|ontology_enrichment_disease=DOID:1909!2.26e-20!2;DOID:1799!9.05e-11!1;DOID:10165!9.05e-11!1;DOID:1798!9.05e-11!1;DOID:6193!9.97e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.56e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.65e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0000966!1.27e-08!5;UBERON:0005388!1.27e-08!5;UBERON:0001802!1.27e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.35e-08;3!UBERON:0001782;1.35e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.21e-08,3;UBERON:0005424,1.21e-08,3;UBERON:0001781,8.61e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52394946301206,1.90994212779139,2.34434894420094,3.4214489204541,2.15937734676979,5.40617504119051,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95227036798582,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628303510868405,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,5.13837600380941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:56349406..56349415,- | |||
}} |
Revision as of 13:57, 11 January 2014
Short description: | p@chr12:56349406..56349415, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:56349406..56349415, - |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.78e-106 | 10 |
melanoblast | 1.78e-106 | 10 |
pigment cell | 2.98e-99 | 14 |
light melanocyte | 3.01e-66 | 3 |
neurecto-epithelial cell | 2.21e-53 | 20 |
columnar/cuboidal epithelial cell | 1.37e-39 | 27 |
ecto-epithelial cell | 1.82e-31 | 34 |
migratory neural crest cell | 6.79e-25 | 41 |
visual pigment cell | 4.11e-23 | 4 |
dark melanocyte | 5.13e-23 | 1 |
neurectodermal cell | 1.50e-17 | 59 |
ectodermal cell | 1.87e-14 | 72 |
retinal pigment epithelial cell | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.21e-08 | 3 |
presumptive retinal pigmented epithelium | 1.21e-08 | 3 |
layer of retina | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.65e-12 | 2 |