FFCP PHASE1:Hg19::chr12:116356689..116356694,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C154 | |||
|description=CAGE_peak_at_chr12:116356689..116356694,- | |||
|id=chr12:116356689..116356694,- | |||
|ontology_enrichment_celltype=CL:0000945!3.44e-07!24;CL:0000826!3.44e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000785;2.30e-21;1!CL:0000819;2.30e-21;1!CL:0000182;2.22e-15;12!CL:0000945;3.67e-08;24!CL:0000322;5.73e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.30e-21,1;CL:0000182,2.12e-15,12;CL:0000785,2.23e-11,2;CL:0000955,2.23e-11,2;CL:0000818,2.23e-11,2;CL:0000954,2.23e-11,2;CL:0000816,2.23e-11,2;CL:0000945,3.63e-08,24;CL:0000826,3.63e-08,24;CL:0000817,5.18e-08,3;CL:0000322,5.93e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.03e-16;11!UBERON:0009497;2.99e-14;13!CL:0000954;2.23e-11;2!UBERON:0001041;6.86e-11;30 | |||
|ontology_enrichment_disease=DOID:162!1.37e-30!235;DOID:14566!1.32e-29!239;DOID:0060058!7.64e-20!10;DOID:2531!1.38e-19!51;DOID:0060083!1.38e-19!51;DOID:0050687!2.83e-16!143;DOID:0050686!2.30e-12!137;DOID:1749!1.68e-09!14;DOID:1240!7.95e-09!39;DOID:305!1.16e-08!106;DOID:8692!4.75e-07!31;DOID:170!7.64e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.30e-21;1!DOID:8675;2.30e-21;1!DOID:0060058;1.10e-18;10!DOID:3910;2.60e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.30e-21,1;DOID:8675,2.30e-21,1;DOID:0060058,1.07e-18,10;DOID:3910,2.73e-11,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.60e-11;2!UBERON:0002173;2.60e-11;2!UBERON:0002186;2.60e-11;2!UBERON:0002107;5.87e-10;19!UBERON:0006925;5.87e-10;19!UBERON:0004821;5.73e-08;3!UBERON:0007499;5.73e-08;3!UBERON:0003215;5.73e-08;3!UBERON:0010368;5.73e-08;3!UBERON:0009911;5.73e-08;3!UBERON:0002299;5.73e-08;3!UBERON:0006524;5.73e-08;3!UBERON:0008874;5.73e-08;3!UBERON:0002169;5.73e-08;3!UBERON:0004894;5.73e-08;3!UBERON:0002423;1.04e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007499,5.34e-13,25;UBERON:0009856,1.63e-12,26;UBERON:0004903,2.73e-11,2;UBERON:0002173,2.73e-11,2;UBERON:0002186,2.73e-11,2;UBERON:0002107,5.69e-10,19;UBERON:0006925,5.69e-10,19;UBERON:0008836,5.69e-10,19;UBERON:0008835,1.08e-08,22;UBERON:0003894,1.08e-08,22;UBERON:0009854,2.42e-08,23;UBERON:0004821,5.93e-08,3;UBERON:0003215,5.93e-08,3;UBERON:0010368,5.93e-08,3;UBERON:0009911,5.93e-08,3;UBERON:0002299,5.93e-08,3;UBERON:0006524,5.93e-08,3;UBERON:0008874,5.93e-08,3;UBERON:0002169,5.93e-08,3;UBERON:0004894,5.93e-08,3;UBERON:0009497,1.01e-07,25;UBERON:0000015,1.01e-07,25;UBERON:0002423,1.01e-07,25;UBERON:0006235,1.01e-07,25;UBERON:0004161,1.01e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0,0,0,0,4.5705648342378,0.853015394924529,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501559486172034,0,0,0,0.111410456885174,0,0,0,0,1.1705341280389,0,0,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0,0,0.561594356226918,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,7.29848107592057,0,0,0.222886768554957,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.492339221844278,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,2.03402920234213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448788222048861,0.217294743844016,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0.189753732724185,0.158936578980379,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,3.83155057352899,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,1.23337732182076,0.19871461170299,0,0,0,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0.203996435272644,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,1.49688046383725,1.07140615895516,1.75249214020881,0,0.169346664131569,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0.197611631897944,2.19226677085613,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0.226705925512272,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0.109209638192014,0.169732529954025,0,0.371807292777007,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0.183428598521679,0,0,0,0,0,0.20170506870352,0,0.523813388962845,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921871900446234,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599646935549574,0.71421575442263,0.352894871715692,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr12:116356689..116356694,- | |||
}} |
Revision as of 16:05, 11 January 2014
Short description: | p@chr12:116356689..116356694, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:116356689..116356694, - |
Coexpression cluster: | C154_adenocarcinoma_Mesenchymal_Cardiac_small_sacrococcigeal_Smooth_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.30e-21 | 1 |
hepatocyte | 2.12e-15 | 12 |
mature B cell | 2.23e-11 | 2 |
pre-B-II cell | 2.23e-11 | 2 |
transitional stage B cell | 2.23e-11 | 2 |
small pre-B-II cell | 2.23e-11 | 2 |
immature B cell | 2.23e-11 | 2 |
lymphocyte of B lineage | 3.63e-08 | 24 |
pro-B cell | 3.63e-08 | 24 |
precursor B cell | 5.18e-08 | 3 |
pneumocyte | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelial sac | 5.34e-13 | 25 |
sac | 1.63e-12 | 26 |
bronchoalveolar duct junction | 2.73e-11 | 2 |
alveolar duct | 2.73e-11 | 2 |
bronchiole | 2.73e-11 | 2 |
liver | 5.69e-10 | 19 |
digestive gland | 5.69e-10 | 19 |
liver bud | 5.69e-10 | 19 |
hepatic diverticulum | 1.08e-08 | 22 |
liver primordium | 1.08e-08 | 22 |
digestive tract diverticulum | 2.42e-08 | 23 |
pulmonary alveolus epithelium | 5.93e-08 | 3 |
alveolus | 5.93e-08 | 3 |
pulmonary lobule | 5.93e-08 | 3 |
lobule | 5.93e-08 | 3 |
alveolus of lung | 5.93e-08 | 3 |
alveolar system | 5.93e-08 | 3 |
pulmonary acinus | 5.93e-08 | 3 |
alveolar sac | 5.93e-08 | 3 |
alveolar wall | 5.93e-08 | 3 |
epithelium of foregut-midgut junction | 1.01e-07 | 25 |
anatomical boundary | 1.01e-07 | 25 |
hepatobiliary system | 1.01e-07 | 25 |
foregut-midgut junction | 1.01e-07 | 25 |
septum transversum | 1.01e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.30e-21 | 1 |
lymphosarcoma | 2.30e-21 | 1 |
lymphoma | 1.07e-18 | 10 |
lung adenocarcinoma | 2.73e-11 | 2 |