FFCP PHASE1:Hg19::chr14:103988009..103988065,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1152 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1991 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001yne.1_5end | |||
|description=CAGE_peak_7_at_CKB_5end | |||
|id=chr14:103988009..103988065,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.93e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.35e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.05e-18!115;UBERON:0001049!2.53e-09!57;UBERON:0005068!2.53e-09!57;UBERON:0006241!2.53e-09!57;UBERON:0007135!2.53e-09!57;UBERON:0003080!3.15e-09!42;UBERON:0001893!4.32e-09!34;UBERON:0001869!4.89e-09!32;UBERON:0002780!5.66e-09!41;UBERON:0001890!5.66e-09!41;UBERON:0006240!5.66e-09!41;UBERON:0002791!1.07e-08!33;UBERON:0002020!3.40e-08!34;UBERON:0003528!3.40e-08!34;UBERON:0004921!5.99e-08!129;UBERON:0004185!5.99e-08!129;UBERON:0002616!1.34e-07!59;UBERON:0004119!1.40e-07!169;UBERON:0000925!1.40e-07!169;UBERON:0006595!1.40e-07!169;UBERON:0002619!1.67e-07!22;UBERON:0000064!2.03e-07!219;UBERON:0000077!2.21e-07!130;UBERON:0001007!2.27e-07!155;UBERON:0001555!2.27e-07!155;UBERON:0007026!2.27e-07!155;UBERON:0001950!6.21e-07!20;UBERON:0001041!9.03e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.95e-11;32!UBERON:0002619;5.22e-11;22!UBERON:0002791;4.65e-10;32!UBERON:0001950;5.82e-10;20!UBERON:0001893;1.64e-09;34!UBERON:0000956;5.45e-09;25!UBERON:0000203;5.45e-09;25!UBERON:0003528;6.42e-09;34!UBERON:0002020;6.42e-09;34!UBERON:0002780;5.80e-08;41!UBERON:0001890;5.80e-08;41!UBERON:0001737;6.26e-07;9!UBERON:0001557;6.26e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.78e-15,114;UBERON:0001869,5.74e-12,32;UBERON:0002619,5.08e-11,22;UBERON:0001893,8.63e-11,34;UBERON:0002791,8.86e-11,32;UBERON:0001950,3.76e-10,20;UBERON:0002780,4.35e-10,41;UBERON:0001890,4.35e-10,41;UBERON:0003080,4.35e-10,41;UBERON:0006240,4.35e-10,41;UBERON:0011216,5.30e-10,223;UBERON:0003528,1.06e-09,34;UBERON:0002020,1.06e-09,34;UBERON:0000956,5.29e-09,25;UBERON:0000203,5.29e-09,25;UBERON:0000073,6.79e-09,53;UBERON:0002616,6.79e-09,53;UBERON:0001049,6.36e-08,56;UBERON:0005068,6.36e-08,56;UBERON:0006241,6.36e-08,56;UBERON:0007135,6.36e-08,56;UBERON:0001737,2.03e-07,9;UBERON:0000955,9.43e-07,68;UBERON:0006238,9.43e-07,68 | |||
|phase1_expression=0.908391896352783,0,0.704772020479856,3.00219895059391,0.893922188854576,0,2.53299878168311,0,1.04474251279935,0.982935746006035,2.79120467188971,0.436882744260345,0.791300934685361,0.247532705920093,0.994192127183747,0.672325146451775,0,0,0,0.738726348460727,0.612002073732759,0.626909442956176,0,0.684372125364421,0.627713197974014,0,0.246301768349837,0.157421562627358,0,0.767658796194425,0.77408061658038,0,0.30120591877825,0.369754010166788,0,0,0.880801318004542,0,0.200544447470142,0,0.671746422719773,0.32389366601898,0,0.581592955118259,1.13362783106643,0,0,0.411167888021826,0,0,0.768482119587302,0,0,0,1.35426486594342,0.941211697713023,0.272906150057846,0,0.918251677112708,0,0,0.329851300186716,0.797854630486527,0,0.290209238628584,0.56738522469114,0.622822248995575,1.25624332628372,1.5644487552606,0.868755378820466,0.605399502633369,1.10483290796269,0.316462387440884,0.845021145247767,0.425208599930087,0.209658645508376,0.336985893439485,0.300353785683013,0.16072558669708,3.99017841237748,1.9891667719909,2.92262646023414,0,0,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,3.92355994087075,2.10707267820062,0.393419540227666,0,0.616804496998528,0,0,0.946895611469467,0,0.779873198196215,0,1.55073726208535,0.270803863765016,0.896639238079726,0.650296737799391,0.986627427622057,0.829050053357545,0.289803085735052,0,0,0,0.793165398882963,1.14966148080576,0,0,0,0.651083453856419,0.950452044448374,0.451725357233318,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.724122019413995,0,0,0.383587685530591,0,0,0.724232594804119,0,0,0.378139268656271,0,0.175669571386252,7.40031776562076,0.728590576585084,0.370784442784429,0,0.348259474598534,0,0,0,0,0.198762407366705,0,0.694281003215189,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0.488124115096339,0,0.81014194788176,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0.872188104285069,0.993943903390637,0.25326102332916,0,0,0,1.68203280042692,1.06748995729705,0,0,0,0,0,0,0.468642863667593,0,0,0.298897361103602,0.117434498643765,0.323745888736263,0.421352420106746,0,0.491337269247072,0.516628905878827,0,0.494533858557114,0.910161361938026,0,0,0.250237039743928,0,1.31693286264251,0.612975591598039,0.751190294532984,0.226864366320042,0.179389635688862,1.2813443329114,0.423863802319124,0,0.515262646192195,0.257640540045629,0.18611685633159,0.675105328965065,0.389748020644795,0.504867548488229,0.920498986422993,0.646584227275248,0.355009592516614,0.604512589365842,0.847802961552438,0,0.272746120590835,0,1.34171076742555,1.59035721985782,1.85910308591229,1.0366105501537,1.00928340350251,1.82488679537915,0,0,0,0.928735856063958,3.60939740834793,1.65629520055781,2.86593973132773,2.16909926895134,3.639701100169,1.74303555273925,1.66089433377768,3.91010793664477,3.13954344200554,1.53898862778556,0,1.40241773803446,0.8231480226628,1.47008711385542,0,1.96565443335525,0.590789906681404,2.20731549707325,0,0,0,0,0,0.462942225792648,0,0,0,0.463721619900307,0,0.288732895522148,0,0.190254152234598,7.11183958163348,8.58486162094873,0.492434012174795,0,0,0.93733833986777,0.16798212819886,0,0.179117045405697,0,0,0,0.44024217006613,0.414656231081544,1.15295962733569,0.6312121671319,0.126995788584338,1.52795370223311,0,0,0,0,0.285826432630578,0.112131084345361,0,0.1466765716419,0.129271715757778,10.7296933755565,0,0.531876233169741,0,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0.823240336780769,0.65147236858747,0.710783897485092,0.791951872933429,0.301439377059586,0,0,0,0,0,0.718874566474748,1.14861935834114,0,0.579125226670317,0,0,0,0.788123040807709,0.215627574859517,0.77005821767849,0.254094624222463,0,2.31986643833309,2.68026024534958,0.637938751653163,0,0,0.828831026872071,0.24538298343828,0,0.542530047399471,0.623912584592421,0,0.157702415033935,1.99140405487612,2.40756879782175,0,0,0,0.184369168541703,0.260650843404249,1.56640925970192,2.05886054286514,0,0.215714200818617,0.213455115606889,7.27506171471023,1.66435439510497,1.5119514666484,1.48864684691266,0.306923946576125,0.841980283299221,1.28139149255701,1.53512174720011,1.12597744800525,0,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,1.01289087829486,0.459257792658427,0,0.524497659837696,0.902399225814824,0.385076685522074,0.784349769176855,2.92278449306521,0.211103257785751,0,0.170093705276516,0.215915916102139,1.54227252690289,1.08378575017541,3.01013864312912,1.52925763827023,3.3243040357149,1.11937377361089,0.877039506583738,1.5686127061494,0.256450125116389,0.656029291399411,0.325378394664303,0.9273691048295,0.54941678891006,0.660075999364704,0,0,0,0.193341436584244,0.154048617114644,0,0.275673144969061,0.107420244868274,0,0.255679882248303,0.979352392114111,0.991709492165869,0.576570202095319,0,0.4046311234222,0.464845549297286,0.31481234683064,0,0,0.532306030317022,0,0.37064843820784,0.286249773483982,0.372158369359667,0,0.190630193923825,0,0.855877976067841,0.636406495851874,0,0.179872457583315,0.54907405947211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| |||
|short_description=p7@CKB | |||
}} |
Revision as of 22:09, 11 January 2014
Short description: | p7@CKB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CKB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001yne.1_5end |
EntrezGene: | CKB |
HGNC: | 1991 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.78e-15 | 114 |
cerebral hemisphere | 5.74e-12 | 32 |
regional part of cerebral cortex | 5.08e-11 | 22 |
telencephalon | 8.63e-11 | 34 |
regional part of telencephalon | 8.86e-11 | 32 |
neocortex | 3.76e-10 | 20 |
regional part of forebrain | 4.35e-10 | 41 |
forebrain | 4.35e-10 | 41 |
anterior neural tube | 4.35e-10 | 41 |
future forebrain | 4.35e-10 | 41 |
organ system subdivision | 5.30e-10 | 223 |
brain grey matter | 1.06e-09 | 34 |
gray matter | 1.06e-09 | 34 |
cerebral cortex | 5.29e-09 | 25 |
pallium | 5.29e-09 | 25 |
regional part of nervous system | 6.79e-09 | 53 |
regional part of brain | 6.79e-09 | 53 |
neural tube | 6.36e-08 | 56 |
neural rod | 6.36e-08 | 56 |
future spinal cord | 6.36e-08 | 56 |
neural keel | 6.36e-08 | 56 |
larynx | 2.03e-07 | 9 |
brain | 9.43e-07 | 68 |
future brain | 9.43e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.35e-07 | 106 |