FFCP PHASE1:Hg19::chr15:29131270..29131360,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=321 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=579 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000559709,ENST00000559814_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_APBA2_5end | |||
|id=chr15:29131270..29131360,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.56e-08!18;CL:0000789!3.56e-08!18;CL:0002420!3.56e-08!18;CL:0002419!3.56e-08!18;CL:0000790!3.56e-08!18;CL:0000625!5.35e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.33e-08;18!CL:0000789;1.33e-08;18!CL:0002419;1.33e-08;18!CL:0000625;1.76e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.52e-08,18;CL:0000789,1.52e-08,18;CL:0002420,1.52e-08,18;CL:0002419,1.52e-08,18;CL:0000790,1.52e-08,18;CL:0000625,1.91e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.33e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.56e-35!94;UBERON:0001016!4.56e-35!94;UBERON:0005743!5.53e-34!86;UBERON:0001017!4.16e-33!82;UBERON:0001049!5.89e-29!57;UBERON:0005068!5.89e-29!57;UBERON:0006241!5.89e-29!57;UBERON:0007135!5.89e-29!57;UBERON:0000955!1.65e-28!69;UBERON:0006238!1.65e-28!69;UBERON:0002616!5.96e-27!59;UBERON:0002346!3.12e-26!90;UBERON:0003075!3.26e-25!86;UBERON:0007284!3.26e-25!86;UBERON:0002780!2.92e-22!41;UBERON:0001890!2.92e-22!41;UBERON:0006240!2.92e-22!41;UBERON:0001893!1.30e-21!34;UBERON:0002020!1.33e-21!34;UBERON:0003528!1.33e-21!34;UBERON:0003080!1.45e-21!42;UBERON:0002791!5.67e-21!33;UBERON:0001869!6.43e-21!32;UBERON:0000924!1.63e-20!173;UBERON:0006601!1.63e-20!173;UBERON:0003056!1.65e-20!61;UBERON:0000033!4.44e-20!123;UBERON:0000153!4.86e-20!129;UBERON:0007811!4.86e-20!129;UBERON:0004121!1.59e-19!169;UBERON:0000956!3.09e-17!25;UBERON:0000203!3.09e-17!25;UBERON:0002619!4.03e-16!22;UBERON:0001950!7.75e-15!20;UBERON:0000119!1.33e-13!312;UBERON:0000483!1.72e-13!309;UBERON:0000025!3.80e-12!194;UBERON:0007023!1.19e-10!115;UBERON:0004111!4.49e-10!241;UBERON:0000477!1.36e-09!286;UBERON:0003076!1.65e-08!15;UBERON:0003057!1.65e-08!15;UBERON:0004732!8.64e-08!13;UBERON:0004733!2.89e-07!12;UBERON:0002028!2.89e-07!12;UBERON:0007277!2.89e-07!12;UBERON:0000475!3.52e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.37e-20;32!UBERON:0001893;2.98e-20;34!UBERON:0002791;3.04e-20;32!UBERON:0003528;3.04e-20;34!UBERON:0002020;3.04e-20;34!UBERON:0000956;1.34e-18;25!UBERON:0000203;1.34e-18;25!UBERON:0002780;1.56e-17;41!UBERON:0001890;1.56e-17;41!UBERON:0000073;2.07e-17;53!UBERON:0002616;2.07e-17;53!UBERON:0002619;2.20e-17;22!UBERON:0001950;5.48e-16;20!UBERON:0001017;6.44e-14;75!UBERON:0000955;1.33e-13;68!UBERON:0001016;6.57e-13;83!UBERON:0004732;2.37e-08;13!UBERON:0004733;8.70e-08;12!UBERON:0002028;8.70e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.82e-36,89;UBERON:0001017,1.54e-35,81;UBERON:0001049,5.90e-32,56;UBERON:0005068,5.90e-32,56;UBERON:0006241,5.90e-32,56;UBERON:0007135,5.90e-32,56;UBERON:0000955,1.42e-30,68;UBERON:0006238,1.42e-30,68;UBERON:0000073,1.69e-30,53;UBERON:0002616,1.69e-30,53;UBERON:0002346,1.69e-28,86;UBERON:0003075,2.09e-27,82;UBERON:0007284,2.09e-27,82;UBERON:0002780,5.89e-24,41;UBERON:0001890,5.89e-24,41;UBERON:0003080,5.89e-24,41;UBERON:0006240,5.89e-24,41;UBERON:0001893,2.96e-23,34;UBERON:0003528,3.04e-23,34;UBERON:0002020,3.04e-23,34;UBERON:0003056,3.11e-23,61;UBERON:0001869,1.67e-22,32;UBERON:0002791,4.31e-22,32;UBERON:0004121,2.54e-21,171;UBERON:0000924,2.54e-21,171;UBERON:0006601,2.54e-21,171;UBERON:0010371,2.84e-21,104;UBERON:0000956,1.62e-18,25;UBERON:0000203,1.62e-18,25;UBERON:0010314,1.35e-17,132;UBERON:0002619,2.60e-17,22;UBERON:0001950,6.38e-16,20;UBERON:0000119,1.55e-12,309;UBERON:0000483,2.01e-12,306;UBERON:0011216,4.21e-12,223;UBERON:0000025,1.02e-11,192;UBERON:0003076,4.46e-09,15;UBERON:0003057,4.46e-09,15;UBERON:0004111,6.58e-09,240;UBERON:0007023,6.78e-09,114;UBERON:0004732,2.67e-08,13;UBERON:0004733,9.85e-08,12;UBERON:0002028,9.85e-08,12;UBERON:0007277,9.85e-08,12 | |||
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| |||
|short_description=p1@APBA2 | |||
}} |
Revision as of 22:33, 11 January 2014
Short description: | p1@APBA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APBA2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000559709, ENST00000559814_5end |
EntrezGene: | APBA2 |
HGNC: | 579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.52e-08 | 18 |
alpha-beta T cell | 1.52e-08 | 18 |
immature T cell | 1.52e-08 | 18 |
mature T cell | 1.52e-08 | 18 |
immature alpha-beta T cell | 1.52e-08 | 18 |
CD8-positive, alpha-beta T cell | 1.91e-07 | 11 |