FFCP PHASE1:Hg19::chr15:32976499..32976506,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6447 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10816 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-110bp_to_ENST00000498607_5end | |||
|coexpression_cluster_id=C2329 | |||
|description=CAGE_peak_10_at_SCG5_5end | |||
|id=chr15:32976499..32976506,+ | |||
|ontology_enrichment_celltype=CL:0002539!9.39e-09!10;CL:0002166!2.15e-08!3;CL:0002621!3.19e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:1000415;3.86e-09;2!CL:0000054;6.67e-09;2!CL:0000137;6.67e-09;2!CL:0000092;6.67e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,4.02e-09,2;CL:0000054,5.49e-09,2;CL:0000137,5.49e-09,2;CL:0000092,5.49e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.37e-13;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:200;6.67e-09;2!DOID:4305;6.67e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:200,5.49e-09,2;DOID:4305,5.49e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0004237!9.39e-09!10;UBERON:0004695!9.39e-09!10;UBERON:0002111!9.39e-09!10;UBERON:0004178!9.39e-09!10;UBERON:0001949!3.19e-08!3;UBERON:0000486!2.04e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;4.72e-17;1!UBERON:0009842;4.72e-17;1!UBERON:0003704;4.72e-17;1!UBERON:0001171;4.72e-17;1!UBERON:0001172;4.72e-17;1!UBERON:0007195;1.78e-16;1!UBERON:0002046;2.37e-13;5!UBERON:0002294;6.55e-10;7!UBERON:0001173;6.55e-10;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,4.72e-17,1;UBERON:0009842,4.72e-17,1;UBERON:0003704,4.72e-17,1;UBERON:0001171,4.72e-17,1;UBERON:0001172,4.72e-17,1;UBERON:0007195,3.07e-16,1;UBERON:0002046,2.37e-13,5;UBERON:0004117,2.37e-13,5;UBERON:0007689,2.37e-13,5;UBERON:0007123,2.37e-13,5;UBERON:0003091,2.37e-13,5;UBERON:0002294,6.77e-08,9;UBERON:0001173,6.77e-08,9;UBERON:0004912,6.77e-08,9 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.45650098894541,0,0,0,0,0.98667019366864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0.37223371266318,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,0.966304265816484,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,1.40402559083543,0.445893486866185,0.93733833986777,0.503946384596579,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.495854746082934,0,0.127612712494584,0,0.464845549297286,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0.6196469961995,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22617410045812,0,0,0,0,0,0.409074730008619,0,0.311039587661807,0.179736702294654,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.63411774174908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37041924646751,0,0,0,3.04603516955828,0,0,0,0,0,0,0.124252535565433,0,0,0,0.611989305817931,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0.467426619694449,0,0,0,0.889811221596536,1.60188047877847,0,0.310874401165561,0.73927574994817,0.159296767163702,1.34940933649081,0,0,0,0,0.150257608997218,0,0,0.363697318405119,0.107410557042488,0.464033759878494,0,0.400027764663154,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,1.52552838186867,0,0,0,3.63069123666336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57903283935411,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p10@SCG5 | |||
}} |
Revision as of 22:39, 11 January 2014
Short description: | p10@SCG5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SCG5_5end |
Coexpression cluster: | C2329_cholangiocellular_gall_pagetoid_mesenchymal_bone_Macrophage_Aortic |
Association with transcript: | -110bp_to_ENST00000498607_5end |
EntrezGene: | SCG5 |
HGNC: | 10816 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 4.02e-09 | 2 |
bone matrix secreting cell | 5.49e-09 | 2 |
osteocyte | 5.49e-09 | 2 |
osteoclast | 5.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 4.72e-17 | 1 |
acinus | 4.72e-17 | 1 |
intrahepatic bile duct | 4.72e-17 | 1 |
portal lobule | 4.72e-17 | 1 |
hepatic acinus | 4.72e-17 | 1 |
stroma of bone marrow | 3.07e-16 | 1 |
thyroid gland | 2.37e-13 | 5 |
pharyngeal pouch | 2.37e-13 | 5 |
thyroid diverticulum | 2.37e-13 | 5 |
pharyngeal pouch 2 | 2.37e-13 | 5 |
thyroid primordium | 2.37e-13 | 5 |
biliary system | 6.77e-08 | 9 |
biliary tree | 6.77e-08 | 9 |
biliary bud | 6.77e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 5.49e-09 | 2 |
bone giant cell tumor | 5.49e-09 | 2 |