FFCP PHASE1:Hg19::chr16:4000459..4000488,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_BC012429_5end | |||
|description=CAGE_peak_3_at_BC012429_5end | |||
|id=chr16:4000459..4000488,- | |||
|ontology_enrichment_celltype=CL:0000055!9.51e-18!180;CL:0000057!6.66e-12!75;CL:0000680!1.69e-11!57;CL:0000056!1.69e-11!57;CL:0000355!1.69e-11!57;CL:0000222!1.61e-10!119;CL:0000187!5.65e-10!54;CL:0000183!5.75e-09!59;CL:0000393!4.80e-08!60;CL:0000211!4.80e-08!60;CL:0000192!3.46e-07!42;CL:0000514!3.46e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002579;7.34e-11;3!CL:0000197;3.37e-09;6!CL:0000098;3.37e-09;6!CL:0002167;3.37e-09;6!CL:0002097;4.57e-08;2!CL:0002602;1.58e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,7.98e-11,3;CL:0000197,2.83e-09,6;CL:0000098,2.83e-09,6;CL:0002167,2.83e-09,6;CL:0002097,7.61e-08,2;CL:0002602,7.88e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.58e-11!83;UBERON:0002329!3.58e-11!83;UBERON:0003077!3.58e-11!83;UBERON:0003059!3.58e-11!83;UBERON:0007282!3.58e-11!83;UBERON:0009618!3.58e-11!83;UBERON:0007285!3.58e-11!83;UBERON:0001134!4.79e-10!61;UBERON:0002036!4.79e-10!61;UBERON:0003082!4.79e-10!61;UBERON:0002385!2.12e-09!63;UBERON:0001015!2.12e-09!63;UBERON:0000383!2.12e-09!63;UBERON:0004290!3.65e-09!70;UBERON:0002100!3.92e-09!216;UBERON:0001737!1.80e-08!9;UBERON:0005256!4.29e-08!143;UBERON:0003104!4.80e-08!238;UBERON:0009142!4.80e-08!238;UBERON:0000486!1.00e-07!82;UBERON:0003688!3.82e-07!6;UBERON:0002358!3.82e-07!6;UBERON:0003684!3.82e-07!6;UBERON:0001178!3.82e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.39e-17;9!UBERON:0000042;1.39e-17;9!UBERON:0003688;3.47e-14;6!UBERON:0002358;3.47e-14;6!UBERON:0003684;3.47e-14;6!UBERON:0001178;3.47e-14;6!UBERON:0004905;4.48e-10;8!UBERON:0000982;4.48e-10;8!UBERON:0004770;4.48e-10;8!UBERON:0006444;1.58e-07;2!UBERON:0001995;1.58e-07;2!UBERON:0004715;1.58e-07;2!UBERON:0000075;8.55e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.59e-14,6;UBERON:0002358,6.59e-14,6;UBERON:0003684,6.59e-14,6;UBERON:0001178,6.59e-14,6;UBERON:0004457,7.64e-13,12;UBERON:0000042,7.64e-13,12;UBERON:0004905,3.02e-10,8;UBERON:0000982,3.02e-10,8;UBERON:0004770,3.02e-10,8;UBERON:0006444,7.88e-08,2;UBERON:0001995,7.88e-08,2;UBERON:0004715,7.88e-08,2;UBERON:0000075,6.44e-07,16 | |||
|phase1_expression=0.908391896352783,1.2846031433459,2.53717927372748,1.0007329835313,0.446961094427288,0.872338524100369,2.53299878168311,0,0,0.245733936501509,2.09340350391728,0,0,1.60896258848061,1.32558950291166,0.672325146451775,0,0,0,0.369363174230364,0.408001382488506,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0.722878304769133,1.00267582127178,1.44846518960824,0,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.13967460498122,1.32409180813219,0.860509862246441,0.709336764396714,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0,0,0,0.103325781175765,0,0.247266929278557,0,1.43723628363248,0,0.125118519871964,0,0.877955241761676,1.83892677479412,1.20190447125277,0.226864366320042,0,1.06778694409284,0.635795703478686,0.300091096084402,0.618315175430633,0.772921620136887,0,0.168776332241266,0.487185025805993,0.504867548488229,0.920498986422993,0.969876340912871,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0.591534000199219,1.18009283054671,0.241011029883482,0.882351781859152,0.871517776369625,0.949082476444386,0.539325232640658,0.98110732562673,1.53898862778556,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.651616610620649,1.03993478527958,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06375246633948,0,0,1.41849132023278,0,0.428933980974443,1.62786481617433,0,0.325736184293735,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0.239624855491583,2.29723871668228,0,0.723906533337896,1.02738161275192,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,1.08506009479894,1.45579603071565,1.60586089917446,2.52323864054295,1.05427273493442,0,0,3.10419213877515,0,0,0.60818530127658,0.195801157462741,0,0,0,0,0,0,0,1.73675465473144,0.767309866440312,0.561320188866147,1.53766979106841,2.04682899626681,1.12597744800525,0,0,0,0.164254312027618,0,0.232420756919918,0,0,0,0.68888668898764,0,1.44236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,1.54673149267395,0,0.307007349452259,0.137836572484531,1.28904293841928,0.870100163485371,0.426133137080504,1.86967274858148,0,0,0,0,0.929691098594572,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0.38126038784765,0,0.42793898803392,0,0,0.539617372749944,1.09814811894422,0.706874414074119,0,3.17020642346017,0,0,0.974853958525138,0,0.409499734223957,0.565621727814851,0,0,0.66343897524122,0.876901770507525,0.578775534266688,0.655894752046633,0.405820753925408,0.30982349809975,0.281695602532241,0.286822704408103,0.687743287091848,0.35667105148125,0,1.47775344708365,1.31717957183961,0.379473173765715,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1308705022906,0,0,0.996239941255349,0,0,0,0,1.24415835064723,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0.762569244632931,0,0.0769502585037971,2.96249345202203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0.284609546029793,0,1.21491816834592,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0.577901179803038,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.633602019116439,0.537862017998534,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0,0,0.566560457600628,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,1.16856654923612,0.554805861502613,0.947015026375446,0.754703705257725,0,0.915360273587694,0,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0.406870733204662,0,0.322231671127465,0.464033759878494,0.796191777397232,3.60024988196838,0.686791410365586,0.336749488765919,1.26184898228651,5.39335525140449,1.07220795687463,0,0.906823702049089,2.31522474323834,0.489473409012935,0.537266523244462,0,2.63140859494449,0,0.38582807654183,0.168942440653073,0,0.690860683462397,0,0,0,0,0,0.655219697692825,3.19504781379835,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,1.41070377476274,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,1.21023041222112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0.354581522651905,0,0,0,0,0,0.431855182437243,0,0.214429632529969,0,0,0,0.801711364730253,0.207216164163037,0.3414369541879,0,0,0.118332000730565,0.170426809518315,0,0.9164274741762,0.3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| |||
|short_description=p3@BC012429 | |||
}} |
Revision as of 02:04, 12 January 2014
Short description: | p3@BC012429 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BC012429_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_BC012429_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 7.98e-11 | 3 |
receptor cell | 2.83e-09 | 6 |
sensory epithelial cell | 2.83e-09 | 6 |
olfactory epithelial cell | 2.83e-09 | 6 |
cortical cell of adrenal gland | 7.61e-08 | 2 |
annulus pulposus cell | 7.88e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.59e-14 | 6 |
peritoneum | 6.59e-14 | 6 |
abdominal cavity | 6.59e-14 | 6 |
visceral peritoneum | 6.59e-14 | 6 |
cavity lining | 7.64e-13 | 12 |
serous membrane | 7.64e-13 | 12 |
articulation | 3.02e-10 | 8 |
skeletal joint | 3.02e-10 | 8 |
articular system | 3.02e-10 | 8 |
annulus fibrosus | 7.88e-08 | 2 |
fibrocartilage | 7.88e-08 | 2 |
annulus fibrosus disci intervertebralis | 7.88e-08 | 2 |
subdivision of skeletal system | 6.44e-07 | 16 |