FFCP PHASE1:Hg19::chr17:74068778..74068799,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6730 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11302 | |||
|TSSclassifier=weak | |||
|UniProt=Q9UHB9,F5H281,B3KMI9 | |||
|association_with_transcript=-171bp_to_ENST00000307877,ENST00000540937,NM_014230,uc002jqk.1,uc002jql.1_5end | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_4_at_SRP68_5end | |||
|id=chr17:74068778..74068799,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;9.48e-18;1!CL:0002372;9.48e-18;1!CL:0000737;1.51e-17;4!CL:0002593;1.51e-09;2!CL:0000746;6.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,6.23e-18,1;CL:0002372,6.23e-18,1;CL:0000737,1.22e-17,4;CL:0002593,2.02e-09,2;CL:0000746,6.88e-07,3;CL:0000513,6.88e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000513;6.88e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4074;1.51e-09;2!DOID:4905;1.51e-09;2!DOID:3498;1.51e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,1.71e-09,2;DOID:4905,1.71e-09,2;DOID:3498,1.71e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.82e-16;10!UBERON:0000178;9.13e-11;15!UBERON:0000179;9.13e-11;15!UBERON:0000463;9.13e-11;15!UBERON:0002456;1.51e-09;2!UBERON:0000478;6.22e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,7.83e-16,10;UBERON:0000358,7.83e-16,10;UBERON:0000307,7.83e-16,10;UBERON:0000091,7.83e-16,10;UBERON:0000087,7.83e-16,10;UBERON:0007010,7.83e-16,10;UBERON:0007806,7.83e-16,10;UBERON:0008780,7.83e-16,10;UBERON:0005728,7.83e-16,10;UBERON:0000178,9.14e-11,15;UBERON:0000179,9.14e-11,15;UBERON:0000463,9.14e-11,15;UBERON:0002456,2.02e-09,2;UBERON:0004535,4.69e-07,109;UBERON:0000478,6.22e-07,24;UBERON:0001009,7.47e-07,112 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0.487932798790507,0.246242116153576,0.204000691244253,0,0,0,0,0.229240217243854,0.656804715599566,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,1.91136614062614,1.32171328579026,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.835979866147242,0,0,0,0,0,0.24406205754817,0.735326160691737,0,0,0.44905874525234,0.563057402416611,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.264818361626438,0,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.245668634623536,0.206651562351531,0,0,0,0,0.168336113954066,0,0,0,0,0,0.340296549480063,0,0.213557388818567,0,0.600182192168805,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.185176890317059,0,0,0,0,0.352226082707465,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0.985326475791887,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0.1466765716419,0.387815147273333,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0.215627574859517,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0.184369168541703,0.260650843404249,0,0.343143423810856,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0,0.164254312027618,0.519254429183621,0.581051892299796,0.120859449591622,0.200506470303285,0,0.114814448164607,0.546273504020151,0.262248829918848,0,0.15403067420883,0,0,0.211103257785751,0,0,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0.426133137080504,0.178064071293475,0,0,0.127612712494584,0.10115778085555,0,0,0.6970372701606,0,0,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0.353437207037059,0.404364963146632,0,0,0,0,1.05650146756755,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0.709522128141196,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0.371606350251437,0,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0.313359791546046,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,1.4098700508785,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0.251932747854276,0,0.492339221844278,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0.189753732724185,0,0,0,0.141353071433941,0.216388639742091,0,0,0,7.11650708833493,6.79601664205766,6.99627061686551,0,0,0,0.182454789215666,0,1.21390189767046,0,0,0,0.063186579628488,0.300646838828985,0.311064574191741,0.664653872707185,0,0.313932918407225,0,0,0.416024019039416,0,0.195984794828755,0.0870592065804026,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0.229073192331831,0,0,0.124252535565433,0,0,0.209205692624666,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.539228350833479,0,0.0846733320657845,0,0,0.160753148465019,0.687697182986169,0.415440338029185,0,0,0.0607495566580247,0,0.0788057072991982,0,0.105600336519406,0,0,0,0,0.25426853765475,0,0.864221491201268,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0.151649117541648,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0.251567901752575,0,0,0,0.310874401165561,0,0.318593534327405,0,0.155262956876259,0,0,0.521745061811734,0,0.761610424337591,0.406870733204662,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.358177682162975,0.308801447160972,0.438568099157414,0.353378291891762,0.192914038270915,0,0,0.345430341731199,0,0,0,0.132864840313363,0,0,0.245772908753719,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0.0634158101939068,0,0,0,0,0.255524855279191,0,0,0,0,0,0.230467975111559,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0.11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| |||
|short_description=p4@SRP68 | |||
}} |
Revision as of 17:25, 20 January 2014
Short description: | p4@SRP68 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SRP68_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -171bp_to_ENST00000307877, ENST00000540937, NM_014230, uc002jqk.1, uc002jql.1_5end |
EntrezGene: | SRP68 |
HGNC: | 11302 |
UniProt: | Q9UHB9F5H281B3KMI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 6.23e-18 | 1 |
myotube | 6.23e-18 | 1 |
striated muscle cell | 1.22e-17 | 4 |
smooth muscle cell of the internal thoracic artery | 2.02e-09 | 2 |
cardiac muscle cell | 6.88e-07 | 3 |
cardiac muscle myoblast | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 7.83e-16 | 10 |
blastocyst | 7.83e-16 | 10 |
blastula | 7.83e-16 | 10 |
bilaminar disc | 7.83e-16 | 10 |
inner cell mass | 7.83e-16 | 10 |
cleaving embryo | 7.83e-16 | 10 |
connecting stalk | 7.83e-16 | 10 |
inner cell mass derived epiblast | 7.83e-16 | 10 |
extraembryonic mesoderm | 7.83e-16 | 10 |
blood | 9.14e-11 | 15 |
haemolymphatic fluid | 9.14e-11 | 15 |
organism substance | 9.14e-11 | 15 |
internal thoracic artery | 2.02e-09 | 2 |
cardiovascular system | 4.69e-07 | 109 |
extraembryonic structure | 6.22e-07 | 24 |
circulatory system | 7.47e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.71e-09 | 2 |
pancreatic carcinoma | 1.71e-09 | 2 |
pancreatic ductal adenocarcinoma | 1.71e-09 | 2 |