FFCP PHASE1:Hg19::chr18:48351743..48351757,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83876 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24121 | |||
|TSSclassifier=not | |||
|UniProt=Q9BYG7,E9PFU2 | |||
|association_with_transcript=0bp_to_ENST00000256425,ENST00000428869,NM_001127174,uc002lex.3,uc010dpc.2_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_MRO_5end | |||
|id=chr18:48351743..48351757,- | |||
|ontology_enrichment_celltype=CL:0002548!3.03e-12!6;CL:0002494!4.01e-12!16;CL:0000746!1.34e-11!3;CL:0000513!1.34e-11!3;CL:0002557!2.82e-09!1;CL:0000737!6.48e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0000746;2.07e-12;3!CL:0000737;1.22e-09;4!CL:0002494;3.01e-09;16!CL:0002548;9.49e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,2.07e-12,3;CL:0000513,2.07e-12,3;CL:0000737,1.22e-09,4;CL:0002494,3.01e-09,16;CL:0002548,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.66e-14;10!UBERON:0005564;2.66e-14;10!CL:0000513;2.07e-12;3 | |||
|ontology_enrichment_disease=DOID:114!2.56e-16!2;DOID:178!5.75e-09!1;DOID:326!5.75e-09!1;DOID:3978!5.75e-09!1;DOID:3394!5.75e-09!1;DOID:5844!5.75e-09!1;DOID:1287!1.30e-08!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.51e-22!27;UBERON:0000948!4.25e-15!24;UBERON:0005498!4.25e-15!24;UBERON:0004140!4.25e-15!24;UBERON:0009881!4.25e-15!24;UBERON:0004141!4.25e-15!24;UBERON:0003084!4.25e-15!24;UBERON:0007005!4.25e-15!24;UBERON:0004139!4.25e-15!24;UBERON:0004291!4.25e-15!24;UBERON:0003103!1.49e-09!69;UBERON:0001882!2.22e-09!1;UBERON:0005403!2.22e-09!1;UBERON:0001000!5.31e-09!1;UBERON:0005352!5.31e-09!1;UBERON:0001048!8.95e-09!168;UBERON:0007023!1.70e-07!115;UBERON:0003135!4.79e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001882;7.06e-34;1!UBERON:0005403;7.06e-34;1!UBERON:0000473;1.33e-17;8!UBERON:0003135;4.25e-13;11!UBERON:0000369;1.57e-09;4!UBERON:0002435;1.57e-09;4!UBERON:0000204;1.57e-09;4!UBERON:0000349;7.01e-08;5!UBERON:0000991;2.52e-07;21!UBERON:0003101;4.94e-07;22!UBERON:0000079;4.94e-07;22!UBERON:0000948;5.57e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001882,7.06e-34,1;UBERON:0005403,7.06e-34,1;UBERON:0000473,1.33e-17,8;UBERON:0003135,4.25e-13,11;UBERON:0000369,1.57e-09,4;UBERON:0002435,1.57e-09,4;UBERON:0000204,1.57e-09,4;UBERON:0010082,1.57e-09,4;UBERON:0000349,7.01e-08,5;UBERON:0000991,2.52e-07,21;UBERON:0009196,2.52e-07,21;UBERON:0009117,2.52e-07,21;UBERON:0005564,2.52e-07,21;UBERON:0004176,4.94e-07,22;UBERON:0003101,4.94e-07,22;UBERON:0000079,4.94e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.6197610389582,0.511450247374121,0,0,0,0,0,0,0,0,30.059697826725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8672662123986,0.134710672069688,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680593098960126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.84485948377782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.1641041380707,90.3039118626321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@MRO | |||
}} |
Revision as of 19:22, 20 January 2014
Short description: | p3@MRO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MRO_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000256425, ENST00000428869, NM_001127174, uc002lex.3, uc010dpc.2_5end |
EntrezGene: | MRO |
HGNC: | 24121 |
UniProt: | Q9BYG7E9PFU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 2.07e-12 | 3 |
cardiac muscle myoblast | 2.07e-12 | 3 |
striated muscle cell | 1.22e-09 | 4 |
cardiocyte | 3.01e-09 | 16 |
cardiac fibroblast | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nucleus accumbens | 7.06e-34 | 1 |
ventral striatum | 7.06e-34 | 1 |
testis | 1.33e-17 | 8 |
male reproductive organ | 4.25e-13 | 11 |
corpus striatum | 1.57e-09 | 4 |
striatum | 1.57e-09 | 4 |
ventral part of telencephalon | 1.57e-09 | 4 |
future corpus striatum | 1.57e-09 | 4 |
limbic system | 7.01e-08 | 5 |
gonad | 2.52e-07 | 21 |
indifferent external genitalia | 2.52e-07 | 21 |
indifferent gonad | 2.52e-07 | 21 |
gonad primordium | 2.52e-07 | 21 |
external genitalia | 4.94e-07 | 22 |
male organism | 4.94e-07 | 22 |
male reproductive system | 4.94e-07 | 22 |