FFCP PHASE1:Hg19::chr19:29374516..29374529,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2085 | |||
|description=CAGE_peak_at_chr19:29374516..29374529,+ | |||
|id=chr19:29374516..29374529,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.21e-16!10;CL:0000541!1.21e-16!10;CL:0000147!2.71e-11!14;CL:0000710!6.14e-09!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.63e-36;10!CL:0000147;9.33e-26;14!CL:0000710;6.25e-18;20!CL:0002567;1.41e-14;3!CL:0000075;3.50e-13;27!CL:0002566;1.52e-11;1!CL:0002077;7.92e-10;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.75e-36,10;CL:0000541,3.75e-36,10;CL:0000147,9.54e-26,14;CL:0000710,6.35e-18,20;CL:0002567,1.41e-14,3;CL:0000075,3.54e-13,27;CL:0002566,1.60e-11,1;CL:0002077,2.23e-10,34;CL:0000333,4.11e-08,41 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.26e-14;3!UBERON:0003057;2.26e-14;3!UBERON:0010227;1.12e-11;1!UBERON:0004140;1.12e-11;1!UBERON:0005062;9.89e-11;4!UBERON:0007284;9.89e-11;4!UBERON:0006601;3.00e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.65e-36!115;UBERON:0001049!3.05e-32!57;UBERON:0005068!3.05e-32!57;UBERON:0006241!3.05e-32!57;UBERON:0007135!3.05e-32!57;UBERON:0002616!2.96e-28!59;UBERON:0000955!6.36e-24!69;UBERON:0006238!6.36e-24!69;UBERON:0003075!8.88e-23!86;UBERON:0007284!8.88e-23!86;UBERON:0005743!5.52e-22!86;UBERON:0001017!7.48e-22!82;UBERON:0002346!2.68e-21!90;UBERON:0000073!2.90e-20!94;UBERON:0001016!2.90e-20!94;UBERON:0003080!7.95e-19!42;UBERON:0002780!1.90e-17!41;UBERON:0001890!1.90e-17!41;UBERON:0006240!1.90e-17!41;UBERON:0002298!1.34e-16!8;UBERON:0001893!9.30e-16!34;UBERON:0002020!1.10e-15!34;UBERON:0003528!1.10e-15!34;UBERON:0003076!1.17e-15!15;UBERON:0003057!1.17e-15!15;UBERON:0002791!1.11e-14!33;UBERON:0002619!2.10e-13!22;UBERON:0000033!3.73e-13!123;UBERON:0004733!3.97e-13!12;UBERON:0002028!3.97e-13!12;UBERON:0007277!3.97e-13!12;UBERON:0000153!5.16e-13!129;UBERON:0007811!5.16e-13!129;UBERON:0001869!5.42e-13!32;UBERON:0003056!1.75e-12!61;UBERON:0004732!5.81e-12!13;UBERON:0000956!1.85e-11!25;UBERON:0000203!1.85e-11!25;UBERON:0000025!1.07e-10!194;UBERON:0004121!1.30e-10!169;UBERON:0001950!1.37e-10!20;UBERON:0000924!3.98e-10!173;UBERON:0006601!3.98e-10!173;UBERON:0004111!6.23e-08!241;UBERON:0002680!6.36e-08!9;UBERON:0001895!6.36e-08!9;UBERON:0010092!6.36e-08!9;UBERON:0001896!1.45e-07!3;UBERON:0005290!1.45e-07!3;UBERON:0010096!1.45e-07!3;UBERON:0000477!2.98e-07!286;UBERON:0006331!8.58e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;2.26e-14;3!UBERON:0005174;2.26e-14;3!UBERON:0001137;2.26e-14;3!UBERON:0001896;5.39e-14;3!UBERON:0003978;5.39e-14;3!UBERON:0000946;5.39e-14;3!UBERON:0005290;5.39e-14;3!UBERON:0002079;1.12e-11;1!UBERON:0002038;4.01e-11;1!UBERON:0002135;4.01e-11;1!UBERON:0002146;4.01e-11;1!UBERON:0009661;4.01e-11;1!UBERON:0005623;4.01e-11;1!UBERON:0002950;4.01e-11;1!UBERON:0001891;4.01e-11;1!UBERON:0004733;6.74e-08;12!UBERON:0002028;6.74e-08;12!UBERON:0000948;1.63e-07;22!UBERON:0002298;1.92e-07;6!UBERON:0004732;2.50e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,2.35e-16,15;UBERON:0003057,2.35e-16,15;UBERON:0002240,2.12e-14,3;UBERON:0005174,2.12e-14,3;UBERON:0001137,2.12e-14,3;UBERON:0003978,5.77e-14,3;UBERON:0009751,5.77e-14,3;UBERON:0000946,5.77e-14,3;UBERON:0002523,5.77e-14,3;UBERON:0005983,5.77e-14,3;UBERON:0002165,5.77e-14,3;UBERON:0002062,5.77e-14,3;UBERON:0007280,5.77e-14,3;UBERON:0001896,6.16e-14,3;UBERON:0005290,6.16e-14,3;UBERON:0010096,6.16e-14,3;UBERON:0003075,1.06e-12,82;UBERON:0007284,1.06e-12,82;UBERON:0002346,4.82e-12,86;UBERON:0010371,1.15e-11,104;UBERON:0002079,1.31e-11,1;UBERON:0002146,2.96e-11,1;UBERON:0005623,2.96e-11,1;UBERON:0002038,3.28e-11,1;UBERON:0009661,3.28e-11,1;UBERON:0002950,3.28e-11,1;UBERON:0001891,3.28e-11,1;UBERON:0009616,3.28e-11,1;UBERON:0010286,3.28e-11,1;UBERON:0002135,6.00e-11,1;UBERON:0007023,1.25e-10,114;UBERON:0010314,1.43e-10,132;UBERON:0001049,4.43e-10,56;UBERON:0005068,4.43e-10,56;UBERON:0006241,4.43e-10,56;UBERON:0007135,4.43e-10,56;UBERON:0004733,7.07e-08,12;UBERON:0002028,7.07e-08,12;UBERON:0007277,7.07e-08,12;UBERON:0002298,2.05e-07,6;UBERON:0004732,2.62e-07,13;UBERON:0000948,6.83e-07,24;UBERON:0005498,6.83e-07,24;UBERON:0004140,6.83e-07,24;UBERON:0009881,6.83e-07,24;UBERON:0004141,6.83e-07,24;UBERON:0003084,6.83e-07,24;UBERON:0007005,6.83e-07,24;UBERON:0004139,6.83e-07,24;UBERON:0004291,6.83e-07,24 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.794455084879313,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.06386523469882,5.34783795781589,3.51652341630141,0,4.42158218624291,2.10240140490742,8.57479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0,0.896974044789907,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.60298219312704,1.52581736317083,0.552896299656123,0.295547618953547,0,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.741412462787447,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23214841002794,0,0.859530882839914,0,1.11712960508902,1.83328339209347,0,0.199679000498991,0.429226048136571,0.223171457441873,5.50904474391155,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,5.00286728461357,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0.612691153526923,0,0,0,0.244052529803926,0,1.14681839138014,1.55300672151593,0.496771223531068,0,0,0,1.99825733481477,0,0,0,0,0,0,0.378806010550178,0.50313580350515,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.478901577171454,0,0,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.413373593002368,0.253663240775627,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.883606528698812,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,5.0748346365426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,2.74831853960923,3.56455680392503,0,0,0,0,0,0,0,0,0,0,1.57673541466596,0,0.203974470572744,0,0,0,0.462175628631418,0.432626562123789,0,0.546327859818478,0,0.203977659483963,0,0.459474497674225,0,0.0757786982182394,0,0,1.24119595034274,0.426467963801962,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:29374516..29374529,+ | |||
}} |
Revision as of 22:32, 20 January 2014
Short description: | p@chr19:29374516..29374529, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:29374516..29374529, + |
Coexpression cluster: | C2085_Melanocyte_melanoma_retina_substantia_spinal_left_vagina |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.75e-36 | 10 |
melanoblast | 3.75e-36 | 10 |
pigment cell | 9.54e-26 | 14 |
neurecto-epithelial cell | 6.35e-18 | 20 |
light melanocyte | 1.41e-14 | 3 |
columnar/cuboidal epithelial cell | 3.54e-13 | 27 |
dark melanocyte | 1.60e-11 | 1 |
ecto-epithelial cell | 2.23e-10 | 34 |
migratory neural crest cell | 4.11e-08 | 41 |