FFCP PHASE1:Hg19::chr19:36606048..36606075,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5438 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9196 | |||
|TSSclassifier=strong | |||
|UniProt=P36954 | |||
|association_with_transcript=130bp_to_ENST00000221859,NM_006233,uc002ode.2,uc002odf.2_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_POLR2I_5end | |||
|id=chr19:36606048..36606075,- | |||
|ontology_enrichment_celltype=CL:0002321!3.67e-10!248;CL:0000055!7.42e-10!180;CL:0000220!9.07e-10!246;CL:0000393!4.02e-08!60;CL:0000211!4.02e-08!60;CL:0000183!6.44e-08!59;CL:0000222!8.99e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,9.27e-09,61;CL:0000211,9.27e-09,61;CL:0002321,1.24e-08,250;CL:0000187,6.27e-07,55;CL:0000680,9.92e-07,58;CL:0000056,9.92e-07,58;CL:0000355,9.92e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.04e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.56e-27!94;UBERON:0001016!3.56e-27!94;UBERON:0005743!1.07e-26!86;UBERON:0001017!2.19e-26!82;UBERON:0000119!9.04e-26!312;UBERON:0000483!1.78e-25!309;UBERON:0000475!1.85e-24!365;UBERON:0001049!2.40e-23!57;UBERON:0005068!2.40e-23!57;UBERON:0006241!2.40e-23!57;UBERON:0007135!2.40e-23!57;UBERON:0000025!2.51e-23!194;UBERON:0000955!2.43e-22!69;UBERON:0006238!2.43e-22!69;UBERON:0003075!1.16e-21!86;UBERON:0007284!1.16e-21!86;UBERON:0002346!8.06e-21!90;UBERON:0004121!1.89e-20!169;UBERON:0002616!3.90e-20!59;UBERON:0000924!4.43e-20!173;UBERON:0006601!4.43e-20!173;UBERON:0004111!2.49e-19!241;UBERON:0002780!1.97e-17!41;UBERON:0001890!1.97e-17!41;UBERON:0006240!1.97e-17!41;UBERON:0000477!4.72e-17!286;UBERON:0003080!8.38e-17!42;UBERON:0001893!1.71e-16!34;UBERON:0002020!1.77e-16!34;UBERON:0003528!1.77e-16!34;UBERON:0003056!5.83e-16!61;UBERON:0002791!7.16e-16!33;UBERON:0000481!8.23e-16!347;UBERON:0001869!3.22e-15!32;UBERON:0000033!3.59e-15!123;UBERON:0000153!3.50e-13!129;UBERON:0007811!3.50e-13!129;UBERON:0000468!3.61e-12!659;UBERON:0000922!5.80e-12!612;UBERON:0002619!1.56e-11!22;UBERON:0000956!2.46e-11!25;UBERON:0000203!2.46e-11!25;UBERON:0000064!4.39e-11!219;UBERON:0000923!5.27e-11!604;UBERON:0005291!5.27e-11!604;UBERON:0006598!5.27e-11!604;UBERON:0002532!5.27e-11!604;UBERON:0002050!6.09e-11!605;UBERON:0005423!6.09e-11!605;UBERON:0001950!2.28e-10!20;UBERON:0000467!1.34e-09!625;UBERON:0000480!1.80e-09!626;UBERON:0002100!4.71e-08!216;UBERON:0005256!8.20e-08!143;UBERON:0003076!8.82e-08!15;UBERON:0003057!8.82e-08!15;UBERON:0003914!2.06e-07!118;UBERON:0004732!7.54e-07!13;UBERON:0002308!8.99e-07!9;UBERON:0000125!8.99e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.15e-16;34!UBERON:0003528;6.57e-16;34!UBERON:0002020;6.57e-16;34!UBERON:0001869;1.79e-15;32!UBERON:0002791;1.99e-15;32!UBERON:0000073;3.80e-15;53!UBERON:0002616;3.80e-15;53!UBERON:0002780;2.14e-14;41!UBERON:0001890;2.14e-14;41!UBERON:0002619;6.24e-13;22!UBERON:0000956;7.29e-13;25!UBERON:0000203;7.29e-13;25!UBERON:0001017;9.73e-12;75!UBERON:0001950;1.23e-11;20!UBERON:0000955;5.10e-11;68!UBERON:0001016;1.16e-09;83!UBERON:0004732;2.08e-07;13!UBERON:0000125;2.14e-07;9!UBERON:0002308;2.14e-07;9!UBERON:0002420;3.46e-07;9!UBERON:0007245;3.46e-07;9!UBERON:0010009;3.46e-07;9!UBERON:0010011;3.46e-07;9!UBERON:0000454;3.46e-07;9 | |||
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| |||
|short_description=p3@POLR2I | |||
}} |
Revision as of 22:57, 20 January 2014
Short description: | p3@POLR2I |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_POLR2I_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 130bp_to_ENST00000221859, NM_006233, uc002ode.2, uc002odf.2_5end |
EntrezGene: | POLR2I |
HGNC: | 9196 |
UniProt: | P36954 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 9.27e-09 | 61 |
electrically active cell | 9.27e-09 | 61 |
embryonic cell | 1.24e-08 | 250 |
muscle cell | 6.27e-07 | 55 |
muscle precursor cell | 9.92e-07 | 58 |
myoblast | 9.92e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.92e-07 | 58 |