FFCP PHASE1:Hg19::chr19:51972656..51972681,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C975 | |||
|description=CAGE_peak_at_chr19:51972656..51972681,- | |||
|id=chr19:51972656..51972681,- | |||
|ontology_enrichment_celltype=CL:0002274!2.11e-28!5;CL:0000457!2.11e-28!5;CL:0002191!2.11e-28!5;CL:0000097!2.11e-28!5;CL:0000831!2.11e-28!5;CL:0002028!2.11e-28!5;CL:0000763!1.35e-18!112;CL:0000049!1.35e-18!112;CL:0002619!9.44e-17!3;CL:0000163!1.11e-15!9;CL:0002032!4.20e-11!165;CL:0000837!4.20e-11!165;CL:0000037!1.85e-10!172;CL:0000566!1.85e-10!172;CL:0000988!1.26e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000097;8.66e-49;5!CL:0002619;2.16e-28;3!CL:0000163;3.96e-27;9!CL:0000763;6.51e-15;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.50e-49,5;CL:0002028,7.50e-49,5;CL:0000763,4.38e-32,108;CL:0000049,4.38e-32,108;CL:0002619,2.88e-28,3;CL:0000163,3.66e-27,9;CL:0002032,1.10e-20,161;CL:0000837,1.10e-20,161;CL:0000037,1.04e-19,168;CL:0000988,1.43e-18,177;CL:0000839,3.48e-08,66;CL:0000557,4.75e-08,67;CL:0000134,8.11e-08,354;CL:0002320,1.32e-07,361;CL:0000766,1.98e-07,72;CL:0000219,7.39e-07,386 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.21e-10;1!CL:0000049;1.17e-09;108 | |||
|ontology_enrichment_disease=DOID:8692!1.81e-31!31;DOID:1240!2.16e-24!39;DOID:2531!6.11e-18!51;DOID:0060083!6.11e-18!51;DOID:1036!4.98e-17!8;DOID:8552!6.43e-07!1;DOID:9119!8.49e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.63e-40;31!DOID:1240;2.40e-26;39!DOID:1036;1.98e-19;8!DOID:2531;5.99e-16;51!DOID:0060083;5.99e-16;51!DOID:8552;4.80e-11;1!DOID:9119;1.21e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.43e-42,31;DOID:1240,5.07e-33,39;DOID:2531,7.83e-25,51;DOID:0060083,7.83e-25,51;DOID:1036,2.34e-19,8;DOID:8552,5.57e-11,1;DOID:9119,9.05e-11,1;DOID:0050686,5.41e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0005162!1.62e-11!2;UBERON:0000122!1.62e-11!2;UBERON:0002298!2.86e-10!8;UBERON:0001896!1.25e-07!3;UBERON:0005290!1.25e-07!3;UBERON:0010096!1.25e-07!3;UBERON:0000941!9.48e-07!1;UBERON:0004904!9.48e-07!1;UBERON:0002464!9.48e-07!1;UBERON:0001021!9.48e-07!1;UBERON:0001785!9.48e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.21e-10;1!UBERON:0001785;1.21e-10;1!UBERON:0002464;1.21e-10;1!UBERON:0004904;1.21e-10;1!UBERON:0001021;1.21e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.10e-10,1;UBERON:0001785,1.10e-10,1;UBERON:0002464,1.10e-10,1;UBERON:0004904,1.10e-10,1;UBERON:0001021,1.10e-10,1;UBERON:0003902,1.10e-10,1;UBERON:0005425,1.10e-10,1;UBERON:0002384,2.57e-07,371;UBERON:0002371,5.42e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11957737119962,1.29557466407592,1.54545340580512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.86793828212698,12.2387323278384,3.7319060797339,5.47655822984453,4.54472760334968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39705560002972,0,1.69338866179106,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0.19538809540204,2.22724939116194,0,3.51592382018778,1.6653598399891,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.10485487091144,3.15802195610297,0,0.784250137270958,1.00692952185506,0,2.54298526368606,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28370082997356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr19:51972656..51972681,- | |||
}} |
Revision as of 00:49, 21 January 2014
Short description: | p@chr19:51972656..51972681, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:51972656..51972681, - |
Coexpression cluster: | C975_Mast_chronic_CD34_acute_leukemia_CD133_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.50e-49 | 5 |
basophil mast progenitor cell | 7.50e-49 | 5 |
myeloid cell | 4.38e-32 | 108 |
common myeloid progenitor | 4.38e-32 | 108 |
adult endothelial progenitor cell | 2.88e-28 | 3 |
endocrine cell | 3.66e-27 | 9 |
hematopoietic oligopotent progenitor cell | 1.10e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.10e-20 | 161 |
hematopoietic stem cell | 1.04e-19 | 168 |
hematopoietic cell | 1.43e-18 | 177 |
myeloid lineage restricted progenitor cell | 3.48e-08 | 66 |
granulocyte monocyte progenitor cell | 4.75e-08 | 67 |
mesenchymal cell | 8.11e-08 | 354 |
connective tissue cell | 1.32e-07 | 361 |
myeloid leukocyte | 1.98e-07 | 72 |
motile cell | 7.39e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.10e-10 | 1 |
cranial nerve | 1.10e-10 | 1 |
nerve trunk | 1.10e-10 | 1 |
nerve connecting eye with brain | 1.10e-10 | 1 |
nerve | 1.10e-10 | 1 |
retinal neural layer | 1.10e-10 | 1 |
presumptive neural retina | 1.10e-10 | 1 |
connective tissue | 2.57e-07 | 371 |
bone marrow | 5.42e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.43e-42 | 31 |
leukemia | 5.07e-33 | 39 |
hematologic cancer | 7.83e-25 | 51 |
immune system cancer | 7.83e-25 | 51 |
chronic leukemia | 2.34e-19 | 8 |
chronic myeloid leukemia | 5.57e-11 | 1 |
acute myeloid leukemia | 9.05e-11 | 1 |
organ system cancer | 5.41e-08 | 137 |