FFCP PHASE1:Hg19::chr2:39116979..39116989,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=100271715 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37252 | |||
|TSSclassifier=strong | |||
|UniProt=A8MVX0 | |||
|association_with_transcript=-31bp_to_ENST00000409978_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_5_at_ARHGEF33_5end | |||
|id=chr2:39116979..39116989,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.27e-147;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!8.03e-30!12;UBERON:0002028!8.03e-30!12;UBERON:0007277!8.03e-30!12;UBERON:0001897!1.92e-29!2;UBERON:0004732!1.53e-27!13;UBERON:0002680!5.55e-26!9;UBERON:0001895!5.55e-26!9;UBERON:0010092!5.55e-26!9;UBERON:0003076!6.91e-24!15;UBERON:0003057!6.91e-24!15;UBERON:0001049!1.75e-23!57;UBERON:0005068!1.75e-23!57;UBERON:0006241!1.75e-23!57;UBERON:0007135!1.75e-23!57;UBERON:0007023!7.03e-23!115;UBERON:0002616!1.14e-22!59;UBERON:0002037!1.97e-22!6;UBERON:0006215!1.97e-22!6;UBERON:0006331!8.67e-20!3;UBERON:0001017!2.34e-19!82;UBERON:0000955!5.18e-19!69;UBERON:0006238!5.18e-19!69;UBERON:0001894!6.30e-19!7;UBERON:0006222!6.30e-19!7;UBERON:0003075!1.19e-18!86;UBERON:0007284!1.19e-18!86;UBERON:0005743!1.99e-18!86;UBERON:0002346!8.76e-18!90;UBERON:0000073!1.29e-16!94;UBERON:0001016!1.29e-16!94;UBERON:0002298!2.04e-16!8;UBERON:0000989!9.99e-16!1;UBERON:0008811!9.99e-16!1;UBERON:0006258!9.99e-16!1;UBERON:0005876!9.99e-16!1;UBERON:0004874!9.99e-16!1;UBERON:0002038!2.38e-15!1;UBERON:0009661!2.38e-15!1;UBERON:0002308!1.10e-14!9;UBERON:0000125!1.10e-14!9;UBERON:0000033!2.36e-10!123;UBERON:0000153!7.89e-10!129;UBERON:0007811!7.89e-10!129;UBERON:0009663!6.06e-09!7;UBERON:0004121!7.56e-09!169;UBERON:0000924!1.28e-08!173;UBERON:0006601!1.28e-08!173;UBERON:0002360!1.73e-08!2;UBERON:0000094!1.73e-08!2;UBERON:0007645!1.73e-08!2;UBERON:0002148!1.86e-08!2;UBERON:0009662!1.86e-08!2;UBERON:0002780!2.06e-08!41;UBERON:0001890!2.06e-08!41;UBERON:0006240!2.06e-08!41;UBERON:0002950!2.48e-08!2;UBERON:0001891!2.48e-08!2;UBERON:0009616!2.48e-08!2;UBERON:0001875!2.67e-08!2;UBERON:0006514!2.67e-08!2;UBERON:0003127!3.08e-08!2;UBERON:0003080!3.24e-08!42;UBERON:0000025!1.22e-07!194;UBERON:0002420!3.78e-07!9;UBERON:0007245!3.78e-07!9;UBERON:0010009!3.78e-07!9;UBERON:0010011!3.78e-07!9;UBERON:0000454!3.78e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.58e-74;6!UBERON:0002680;5.60e-50;9!UBERON:0001895;5.60e-50;9!UBERON:0004733;8.61e-38;12!UBERON:0002028;8.61e-38;12!UBERON:0004732;5.63e-35;13!UBERON:0001897;9.18e-26;2!UBERON:0010225;9.18e-26;2!UBERON:0002784;1.29e-13;4!UBERON:0000073;7.38e-11;53!UBERON:0002616;7.38e-11;53!UBERON:0000955;9.20e-09;68!UBERON:0001894;2.35e-08;7!UBERON:0001016;8.04e-08;83!UBERON:0001017;9.63e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.58e-74,6;UBERON:0006215,2.58e-74,6;UBERON:0002680,5.60e-50,9;UBERON:0001895,5.60e-50,9;UBERON:0010092,5.60e-50,9;UBERON:0004733,8.61e-38,12;UBERON:0002028,8.61e-38,12;UBERON:0007277,8.61e-38,12;UBERON:0004732,5.63e-35,13;UBERON:0003076,1.81e-30,15;UBERON:0003057,1.81e-30,15;UBERON:0001897,9.18e-26,2;UBERON:0010225,9.18e-26,2;UBERON:0000073,1.70e-15,53;UBERON:0002616,1.70e-15,53;UBERON:0001049,9.92e-15,56;UBERON:0005068,9.92e-15,56;UBERON:0006241,9.92e-15,56;UBERON:0007135,9.92e-15,56;UBERON:0002784,1.29e-13,4;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0001017,2.17e-10,81;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0001016,1.88e-09,89;UBERON:0010371,2.22e-08,104;UBERON:0001894,2.35e-08,7;UBERON:0006222,2.35e-08,7;UBERON:0007023,8.86e-08,114;UBERON:0010314,8.99e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05163472634166,8.40402375477307,7.09314285488514,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@ARHGEF33 | |||
}} |
Revision as of 02:41, 21 January 2014
Short description: | p5@ARHGEF33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_5_at_ARHGEF33_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -31bp_to_ENST00000409978_5end |
EntrezGene: | ARHGEF33 |
HGNC: | 37252 |
UniProt: | A8MVX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.58e-74 | 6 |
rhombic lip | 2.58e-74 | 6 |
regional part of metencephalon | 5.60e-50 | 9 |
metencephalon | 5.60e-50 | 9 |
future metencephalon | 5.60e-50 | 9 |
segmental subdivision of hindbrain | 8.61e-38 | 12 |
hindbrain | 8.61e-38 | 12 |
presumptive hindbrain | 8.61e-38 | 12 |
segmental subdivision of nervous system | 5.63e-35 | 13 |
posterior neural tube | 1.81e-30 | 15 |
chordal neural plate | 1.81e-30 | 15 |
dorsal plus ventral thalamus | 9.18e-26 | 2 |
thalamic complex | 9.18e-26 | 2 |
regional part of nervous system | 1.70e-15 | 53 |
regional part of brain | 1.70e-15 | 53 |
neural tube | 9.92e-15 | 56 |
neural rod | 9.92e-15 | 56 |
future spinal cord | 9.92e-15 | 56 |
neural keel | 9.92e-15 | 56 |
regional part of diencephalon | 1.29e-13 | 4 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
central nervous system | 2.17e-10 | 81 |
neural plate | 2.17e-10 | 82 |
presumptive neural plate | 2.17e-10 | 82 |
neurectoderm | 5.98e-10 | 86 |
nervous system | 1.88e-09 | 89 |
ecto-epithelium | 2.22e-08 | 104 |
diencephalon | 2.35e-08 | 7 |
future diencephalon | 2.35e-08 | 7 |
adult organism | 8.86e-08 | 114 |
structure with developmental contribution from neural crest | 8.99e-07 | 132 |