FFCP PHASE1:Hg19::chr2:90007649..90007660,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5751 | |||
|TSSclassifier=weak | |||
|UniProt=P04431 | |||
|association_with_transcript=-16bp_to_ENST00000453184_5end | |||
|coexpression_cluster_id=C481 | |||
|description=CAGE_peak_1_at_IGKV1D-27_5end | |||
|id=chr2:90007649..90007660,+ | |||
|ontology_enrichment_celltype=CL:0000236!4.60e-45!14;CL:0000945!2.43e-33!24;CL:0000826!2.43e-33!24;CL:0000542!6.84e-15!53;CL:0000051!6.84e-15!53;CL:0000838!2.19e-13!52;CL:0000785!1.10e-08!2;CL:0000955!1.10e-08!2;CL:0000818!1.10e-08!2;CL:0000954!1.10e-08!2;CL:0000816!1.10e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.62e-73;13!CL:0000945;1.81e-54;24!CL:0000542;6.06e-19;53!CL:0000946;3.67e-09;1!CL:0000785;3.67e-09;1!CL:0000819;3.67e-09;1!CL:0000786;3.67e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,9.12e-81,14;CL:0000945,1.46e-54,24;CL:0000826,1.46e-54,24;CL:0000838,5.49e-24,52;CL:0000542,1.72e-23,53;CL:0000051,1.72e-23,53;CL:0000785,1.70e-16,2;CL:0000955,1.70e-16,2;CL:0000818,1.70e-16,2;CL:0000954,1.70e-16,2;CL:0000816,1.70e-16,2;CL:0000817,2.57e-11,3;CL:0002087,1.75e-09,115;CL:0000946,3.83e-09,1;CL:0000786,3.83e-09,1;CL:0000980,3.83e-09,1;CL:0000819,4.50e-09,1;CL:0002031,5.37e-09,120;CL:0000738,1.12e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;6.06e-19;53!CL:0000954;1.33e-16;2!UBERON:0006965;1.33e-16;2!UBERON:0004872;1.01e-10;7!UBERON:0010115;3.67e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;3.67e-09;1!DOID:8675;3.67e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,4.50e-09,1;DOID:8675,4.50e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.75e-18!115;UBERON:0002106!2.57e-11!3;UBERON:0004854!2.57e-11!3;UBERON:0009034!2.57e-11!3;UBERON:0002095!2.57e-11!3;UBERON:0004782!2.57e-11!3;UBERON:0003281!2.57e-11!3;UBERON:0009664!2.57e-11!3;UBERON:0002296!2.57e-11!3;UBERON:0005602!2.57e-11!3;UBERON:0001179!2.57e-11!3;UBERON:0006293!2.57e-11!3;UBERON:0004177!2.06e-08!7;UBERON:0001829!2.25e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;7.97e-10;1!UBERON:0002372;1.37e-09;1!UBERON:0001961;1.37e-09;1!UBERON:0001744;1.37e-09;1!UBERON:0001042;1.37e-09;1!UBERON:0001735;1.37e-09;1!UBERON:0002363;3.67e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,7.98e-10,1;UBERON:0002372,1.56e-09,1;UBERON:0001961,1.56e-09,1;UBERON:0001744,1.56e-09,1;UBERON:0001735,1.56e-09,1;UBERON:0002363,2.35e-09,1;UBERON:0007645,2.35e-09,1;UBERON:0007647,2.35e-09,1;UBERON:0010115,2.35e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,5.57763844178172,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3197371122926,7.09980194640771,3.55803701545422,5.54749289336459,8.00791974072025,4.02326707968138,3.96626923670917,9.54053754535364,1.70763890732835,1.76171156811282,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,1.19548792950642,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0,0,0,1.27718352450966,0,0,0,0,0,1.95878396848313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630445658393585,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,1.17466153824464,0,0.414239055347196,54.0820963775026,1.38328142328561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,1.21393120847326,0,0,1.38280785066935,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,2.53756578545605,0.128915775947154,0.199882311849858,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5440835294255,0,0.775066918032073,0,0,0,0,0.870866991587845,0,5.52286834719618,0.502055437748735,0,0,0,0,0,0,0,0,0,1.81146414231924,0 | |||
|short_description=p1@IGKV1D-27 | |||
}} |
Revision as of 04:23, 21 January 2014
Short description: | p1@IGKV1D-27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_IGKV1D-27_5end |
Coexpression cluster: | C481_lymph_vein_tonsil_appendix_submaxillary_trachea_temporal |
Association with transcript: | -16bp_to_ENST00000453184_5end |
EntrezGene: | NA |
HGNC: | 5751 |
UniProt: | P04431 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 9.12e-81 | 14 |
lymphocyte of B lineage | 1.46e-54 | 24 |
pro-B cell | 1.46e-54 | 24 |
lymphoid lineage restricted progenitor cell | 5.49e-24 | 52 |
lymphocyte | 1.72e-23 | 53 |
common lymphoid progenitor | 1.72e-23 | 53 |
mature B cell | 1.70e-16 | 2 |
pre-B-II cell | 1.70e-16 | 2 |
transitional stage B cell | 1.70e-16 | 2 |
small pre-B-II cell | 1.70e-16 | 2 |
immature B cell | 1.70e-16 | 2 |
precursor B cell | 2.57e-11 | 3 |
nongranular leukocyte | 1.75e-09 | 115 |
antibody secreting cell | 3.83e-09 | 1 |
plasma cell | 3.83e-09 | 1 |
plasmablast | 3.83e-09 | 1 |
B-1 B cell | 4.50e-09 | 1 |
hematopoietic lineage restricted progenitor cell | 5.37e-09 | 120 |
leukocyte | 1.12e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
lymph node | 7.98e-10 | 1 |
tonsil | 1.56e-09 | 1 |
mucosa-associated lymphoid tissue | 1.56e-09 | 1 |
lymphoid tissue | 1.56e-09 | 1 |
tonsillar ring | 1.56e-09 | 1 |
dura mater | 2.35e-09 | 1 |
future meninx | 2.35e-09 | 1 |
ectomeninx | 2.35e-09 | 1 |
future dura mater | 2.35e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 4.50e-09 | 1 |
lymphosarcoma | 4.50e-09 | 1 |