FFCP PHASE1:Hg19::chr20:45061732..45061743,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63916 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17233 | |||
|TSSclassifier=strong | |||
|UniProt=F5GZP8 | |||
|association_with_transcript=-28bp_to_ENST00000445496,uc010zxs.1_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_3_at_ELMO2_5end | |||
|id=chr20:45061732..45061743,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.33e-118;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!1.88e-50!12;UBERON:0002028!1.88e-50!12;UBERON:0007277!1.88e-50!12;UBERON:0004732!1.52e-46!13;UBERON:0003076!2.71e-40!15;UBERON:0003057!2.71e-40!15;UBERON:0002680!8.69e-35!9;UBERON:0001895!8.69e-35!9;UBERON:0010092!8.69e-35!9;UBERON:0001049!1.28e-34!57;UBERON:0005068!1.28e-34!57;UBERON:0006241!1.28e-34!57;UBERON:0007135!1.28e-34!57;UBERON:0002616!2.04e-33!59;UBERON:0000955!1.41e-32!69;UBERON:0006238!1.41e-32!69;UBERON:0001017!1.52e-31!82;UBERON:0005743!4.86e-30!86;UBERON:0000073!4.18e-27!94;UBERON:0001016!4.18e-27!94;UBERON:0003075!2.20e-26!86;UBERON:0007284!2.20e-26!86;UBERON:0002346!3.73e-25!90;UBERON:0001871!5.23e-25!7;UBERON:0002298!5.23e-25!8;UBERON:0007023!1.36e-22!115;UBERON:0002037!8.04e-20!6;UBERON:0006215!8.04e-20!6;UBERON:0002619!5.05e-19!22;UBERON:0000033!8.09e-18!123;UBERON:0001896!1.08e-17!3;UBERON:0005290!1.08e-17!3;UBERON:0010096!1.08e-17!3;UBERON:0000988!2.71e-17!3;UBERON:0000153!6.31e-17!129;UBERON:0007811!6.31e-17!129;UBERON:0000956!8.44e-17!25;UBERON:0000203!8.44e-17!25;UBERON:0002020!1.06e-16!34;UBERON:0003528!1.06e-16!34;UBERON:0001950!1.15e-14!20;UBERON:0004121!1.50e-14!169;UBERON:0000924!3.53e-14!173;UBERON:0006601!3.53e-14!173;UBERON:0002022!1.61e-13!1;UBERON:0001869!3.54e-13!32;UBERON:0002791!8.81e-13!33;UBERON:0001893!2.08e-12!34;UBERON:0000349!5.03e-11!5;UBERON:0000025!7.95e-11!194;UBERON:0002780!2.76e-10!41;UBERON:0001890!2.76e-10!41;UBERON:0006240!2.76e-10!41;UBERON:0003080!4.87e-10!42;UBERON:0004111!2.28e-08!241;UBERON:0000064!6.21e-08!219;UBERON:0001876!1.20e-07!2;UBERON:0002360!1.28e-07!2;UBERON:0000094!1.28e-07!2;UBERON:0007645!1.28e-07!2;UBERON:0001954!1.45e-07!2;UBERON:0003022!1.45e-07!2;UBERON:0002421!1.45e-07!2;UBERON:0002600!1.45e-07!2;UBERON:0002148!1.99e-07!2;UBERON:0009662!1.99e-07!2;UBERON:0000483!3.00e-07!309;UBERON:0000119!3.68e-07!312;UBERON:0003056!7.50e-07!61;UBERON:0000477!9.29e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;8.15e-60;6!UBERON:0004733;4.61e-53;12!UBERON:0002028;4.61e-53;12!UBERON:0004732;4.63e-49;13!UBERON:0002680;2.91e-40;9!UBERON:0001895;2.91e-40;9!UBERON:0001876;6.96e-21;2!UBERON:0000073;1.64e-14;53!UBERON:0002616;1.64e-14;53!UBERON:0001896;1.83e-14;3!UBERON:0005290;1.83e-14;3!UBERON:0000955;6.90e-10;68!UBERON:0000349;3.49e-09;5!UBERON:0001016;4.18e-09;83!UBERON:0002298;6.78e-08;6!UBERON:0001017;1.52e-07;75!UBERON:0001871;6.39e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.15e-60,6;UBERON:0006215,8.15e-60,6;UBERON:0004733,4.61e-53,12;UBERON:0002028,4.61e-53,12;UBERON:0007277,4.61e-53,12;UBERON:0004732,4.63e-49,13;UBERON:0003076,1.18e-42,15;UBERON:0003057,1.18e-42,15;UBERON:0002680,2.91e-40,9;UBERON:0001895,2.91e-40,9;UBERON:0010092,2.91e-40,9;UBERON:0001876,6.96e-21,2;UBERON:0000073,6.22e-19,53;UBERON:0002616,6.22e-19,53;UBERON:0001049,5.63e-18,56;UBERON:0005068,5.63e-18,56;UBERON:0006241,5.63e-18,56;UBERON:0007135,5.63e-18,56;UBERON:0000955,9.02e-15,68;UBERON:0006238,9.02e-15,68;UBERON:0001896,1.83e-14,3;UBERON:0005290,1.83e-14,3;UBERON:0010096,1.83e-14,3;UBERON:0001017,1.45e-12,81;UBERON:0003075,1.45e-12,82;UBERON:0007284,1.45e-12,82;UBERON:0002346,5.13e-12,86;UBERON:0001016,2.13e-11,89;UBERON:0010371,4.61e-10,104;UBERON:0007023,2.58e-09,114;UBERON:0000349,3.49e-09,5;UBERON:0010314,4.60e-08,132;UBERON:0002298,6.78e-08,6;UBERON:0001871,6.39e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,35.0937993529291,50.7558803084321,11.8219047581419,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5513681853476,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@ELMO2 | |||
}} |
Revision as of 11:43, 21 January 2014
Short description: | p3@ELMO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ELMO2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -28bp_to_ENST00000445496, uc010zxs.1_5end |
EntrezGene: | ELMO2 |
HGNC: | 17233 |
UniProt: | F5GZP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.15e-60 | 6 |
rhombic lip | 8.15e-60 | 6 |
segmental subdivision of hindbrain | 4.61e-53 | 12 |
hindbrain | 4.61e-53 | 12 |
presumptive hindbrain | 4.61e-53 | 12 |
segmental subdivision of nervous system | 4.63e-49 | 13 |
posterior neural tube | 1.18e-42 | 15 |
chordal neural plate | 1.18e-42 | 15 |
regional part of metencephalon | 2.91e-40 | 9 |
metencephalon | 2.91e-40 | 9 |
future metencephalon | 2.91e-40 | 9 |
amygdala | 6.96e-21 | 2 |
regional part of nervous system | 6.22e-19 | 53 |
regional part of brain | 6.22e-19 | 53 |
neural tube | 5.63e-18 | 56 |
neural rod | 5.63e-18 | 56 |
future spinal cord | 5.63e-18 | 56 |
neural keel | 5.63e-18 | 56 |
brain | 9.02e-15 | 68 |
future brain | 9.02e-15 | 68 |
medulla oblongata | 1.83e-14 | 3 |
myelencephalon | 1.83e-14 | 3 |
future myelencephalon | 1.83e-14 | 3 |
central nervous system | 1.45e-12 | 81 |
neural plate | 1.45e-12 | 82 |
presumptive neural plate | 1.45e-12 | 82 |
neurectoderm | 5.13e-12 | 86 |
nervous system | 2.13e-11 | 89 |
ecto-epithelium | 4.61e-10 | 104 |
adult organism | 2.58e-09 | 114 |
limbic system | 3.49e-09 | 5 |
structure with developmental contribution from neural crest | 4.60e-08 | 132 |
brainstem | 6.78e-08 | 6 |
temporal lobe | 6.39e-07 | 6 |