FFCP PHASE1:Hg19::chr22:24322322..24322327,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=2953 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4642 | |||
|TSSclassifier=weak | |||
|UniProt=P0CG30 | |||
|association_with_transcript=8bp_to_NM_000854,uc002zzb.3,uc002zzc.3_5end | |||
|description=CAGE_peak_1_at_GSTT2_5end | |||
|id=chr22:24322322..24322327,+ | |||
|ontology_enrichment_celltype=CL:0000197!2.02e-08!6;CL:0000098!2.02e-08!6;CL:0002167!2.02e-08!6;CL:0000075!2.49e-07!27;CL:0000710!5.86e-07!20;CL:0002274!9.29e-07!5;CL:0000457!9.29e-07!5;CL:0002191!9.29e-07!5;CL:0000097!9.29e-07!5;CL:0000831!9.29e-07!5;CL:0002028!9.29e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002588;6.30e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002588,5.48e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.27e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;8.46e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.74e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.63e-21!9;UBERON:0001557!1.47e-10!19;UBERON:0001017!8.88e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.10e-31;9!UBERON:0001557;1.10e-31;9!UBERON:0003528;5.60e-07;34!UBERON:0002020;5.60e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.30e-31,9;UBERON:0001557,4.86e-14,19;UBERON:0001049,7.48e-11,56;UBERON:0005068,7.48e-11,56;UBERON:0006241,7.48e-11,56;UBERON:0007135,7.48e-11,56;UBERON:0000073,4.15e-10,53;UBERON:0002616,4.15e-10,53;UBERON:0001017,8.04e-10,81;UBERON:0003075,1.66e-08,82;UBERON:0007284,1.66e-08,82;UBERON:0002780,1.83e-08,41;UBERON:0001890,1.83e-08,41;UBERON:0003080,1.83e-08,41;UBERON:0006240,1.83e-08,41;UBERON:0001016,1.89e-08,89;UBERON:0002346,6.14e-08,86;UBERON:0003056,3.84e-07,61;UBERON:0000955,4.36e-07,68;UBERON:0006238,4.36e-07,68;UBERON:0003528,5.29e-07,34;UBERON:0002020,5.29e-07,34 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,1.80808358407193,2.19093027116212,2.43966399395253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04580098949649,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926864265692532,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.843881661206331,0,0,0,3.39456719319505,0,0,0,0,0,0,0,0,0,0,1.00928340350251,0,0,0,0,0,0,2.12952240071719,6.06904884281166,5.54325368732009,2.20587945464788,5.88274499049497,3.08451804844426,3.50561401216427,2.74710051175484,6.54070166808864,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,3.70977295920246,1.40890433082986,0,0,1.14152491340759,0,0,0,0,0,0,1.34385702559088,0.708875486211932,0,0,0,0,1.14462964217194,0.207328115540772,0.864719720501769,0.6312121671319,0.761974731506028,0,0,0,0,2.40274446275134,2.28661146104463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,1.24782516918484,0.356857977594324,0.315404830067869,0.819989904948992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91577749247319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,2.72481569187698,2.25972794330179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,4.15750553165694,0,4.97073823883149,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.85741385813839,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0.638002319463839,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,6.00420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77137813885582,0,5.78711334474069,1.78801267576404,7.06248574649615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45637617086946,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.612691153526923,0,0,7.08854543973589,2.19647276823534,0,4.58727356552057,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,2.69881867298163,0,2.90294345488599,0,6.78268580355254,0,3.80805212168795,0,0,0,3.24823631914946,4.77715066438339,0,1.71697852591396,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,4.25089728976755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46754669029693,0,0,0,0,0,0,0,2.14280734351315,0,4.85572483389305,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,1.37415926980462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63335551567024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@GSTT2 | |||
}} |
Revision as of 14:54, 21 January 2014
Short description: | p1@GSTT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GSTT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_NM_000854, uc002zzb.3, uc002zzc.3_5end |
EntrezGene: | GSTT2 |
HGNC: | 4642 |
UniProt: | P0CG30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical vein | 5.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.30e-31 | 9 |
upper respiratory tract | 4.86e-14 | 19 |
neural tube | 7.48e-11 | 56 |
neural rod | 7.48e-11 | 56 |
future spinal cord | 7.48e-11 | 56 |
neural keel | 7.48e-11 | 56 |
regional part of nervous system | 4.15e-10 | 53 |
regional part of brain | 4.15e-10 | 53 |
central nervous system | 8.04e-10 | 81 |
neural plate | 1.66e-08 | 82 |
presumptive neural plate | 1.66e-08 | 82 |
regional part of forebrain | 1.83e-08 | 41 |
forebrain | 1.83e-08 | 41 |
anterior neural tube | 1.83e-08 | 41 |
future forebrain | 1.83e-08 | 41 |
nervous system | 1.89e-08 | 89 |
neurectoderm | 6.14e-08 | 86 |
pre-chordal neural plate | 3.84e-07 | 61 |
brain | 4.36e-07 | 68 |
future brain | 4.36e-07 | 68 |
brain grey matter | 5.29e-07 | 34 |
gray matter | 5.29e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.74e-09 | 14 |