FFCP PHASE1:Hg19::chr22:40573921..40573945,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23112 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29190 | |||
|TSSclassifier=strong | |||
|UniProt=A8MYY3,Q9UPQ9 | |||
|association_with_transcript=0bp_to_ENST00000335727,ENST00000400140,ENST00000454349,ENST00000489500,NM_001162501,NM_015088,uc003ayn.3,uc011aor.1_5end | |||
|description=CAGE_peak_2_at_TNRC6B_5end | |||
|id=chr22:40573921..40573945,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.11e-24!82;UBERON:0007023!9.72e-24!115;UBERON:0001049!3.97e-23!57;UBERON:0005068!3.97e-23!57;UBERON:0006241!3.97e-23!57;UBERON:0007135!3.97e-23!57;UBERON:0005743!4.92e-22!86;UBERON:0000073!2.78e-21!94;UBERON:0001016!2.78e-21!94;UBERON:0002780!7.89e-21!41;UBERON:0001890!7.89e-21!41;UBERON:0006240!7.89e-21!41;UBERON:0002616!1.33e-20!59;UBERON:0003080!1.03e-19!42;UBERON:0000955!1.10e-19!69;UBERON:0006238!1.10e-19!69;UBERON:0002020!9.94e-18!34;UBERON:0003528!9.94e-18!34;UBERON:0001893!2.30e-17!34;UBERON:0002791!5.17e-17!33;UBERON:0001869!2.76e-16!32;UBERON:0002346!2.72e-15!90;UBERON:0003075!4.45e-15!86;UBERON:0007284!4.45e-15!86;UBERON:0000924!2.20e-13!173;UBERON:0006601!2.20e-13!173;UBERON:0000956!3.59e-13!25;UBERON:0000203!3.59e-13!25;UBERON:0004121!4.65e-13!169;UBERON:0002619!7.48e-13!22;UBERON:0000153!1.12e-12!129;UBERON:0007811!1.12e-12!129;UBERON:0003056!2.31e-12!61;UBERON:0000033!5.20e-12!123;UBERON:0001950!1.26e-11!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.26e-16;41!UBERON:0001890;7.26e-16;41!UBERON:0003528;1.43e-15;34!UBERON:0002020;1.43e-15;34!UBERON:0002791;1.50e-15;32!UBERON:0001893;2.60e-15;34!UBERON:0001869;2.81e-15;32!UBERON:0000073;5.72e-14;53!UBERON:0002616;5.72e-14;53!UBERON:0000956;1.62e-13;25!UBERON:0000203;1.62e-13;25!UBERON:0002619;3.75e-13;22!UBERON:0001950;6.89e-12;20!UBERON:0000955;2.79e-09;68!UBERON:0001017;5.22e-09;75!UBERON:0001016;7.14e-09;83!UBERON:0007023;6.96e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.53e-25,81;UBERON:0001049,2.10e-24,56;UBERON:0005068,2.10e-24,56;UBERON:0006241,2.10e-24,56;UBERON:0007135,2.10e-24,56;UBERON:0001016,3.46e-24,89;UBERON:0007023,2.00e-23,114;UBERON:0000073,1.38e-22,53;UBERON:0002616,1.38e-22,53;UBERON:0002780,4.28e-21,41;UBERON:0001890,4.28e-21,41;UBERON:0003080,4.28e-21,41;UBERON:0006240,4.28e-21,41;UBERON:0000955,1.14e-20,68;UBERON:0006238,1.14e-20,68;UBERON:0003528,5.95e-18,34;UBERON:0002020,5.95e-18,34;UBERON:0001893,1.39e-17,34;UBERON:0002791,9.82e-17,32;UBERON:0001869,1.73e-16,32;UBERON:0002346,5.13e-15,86;UBERON:0003075,8.39e-15,82;UBERON:0007284,8.39e-15,82;UBERON:0000956,2.49e-13,25;UBERON:0000203,2.49e-13,25;UBERON:0004121,2.97e-13,171;UBERON:0000924,2.97e-13,171;UBERON:0006601,2.97e-13,171;UBERON:0002619,5.23e-13,22;UBERON:0003056,1.08e-12,61;UBERON:0010314,2.45e-12,132;UBERON:0001950,9.17e-12,20;UBERON:0010371,1.01e-09,104;UBERON:0011216,3.19e-09,223 | |||
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| |||
|short_description=p2@TNRC6B | |||
}} |
Revision as of 16:09, 21 January 2014
Short description: | p2@TNRC6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TNRC6B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000335727, ENST00000400140, ENST00000454349, ENST00000489500, NM_001162501, NM_015088, uc003ayn.3, uc011aor.1_5end |
EntrezGene: | TNRC6B |
HGNC: | 29190 |
UniProt: | A8MYY3Q9UPQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data