FFCP PHASE1:Hg19::chr3:49070544..49070558,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54870 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24713 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=42bp_to_ENST00000469910_5end | |||
|coexpression_cluster_id=C558 | |||
|description=CAGE_peak_8_at_QRICH1_5end | |||
|id=chr3:49070544..49070558,- | |||
|ontology_enrichment_celltype=CL:0000183!5.28e-09!59;CL:0000393!1.42e-08!60;CL:0000211!1.42e-08!60;CL:0000192!1.10e-07!42;CL:0000514!1.10e-07!42;CL:0000187!1.61e-07!54;CL:0000680!3.76e-07!57;CL:0000056!3.76e-07!57;CL:0000355!3.76e-07!57;CL:0000222!3.98e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:1000497;3.43e-07;17!CL:0002518;3.43e-07;17!CL:1000449;3.87e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.24e-08,61;CL:0000211,2.24e-08,61;CL:1000497,8.99e-08,17;CL:0002518,8.99e-08,17;CL:1000449,9.40e-08,15;CL:0000192,2.18e-07,43;CL:0000514,2.18e-07,43;CL:0000187,3.01e-07,55;CL:0000680,6.62e-07,58;CL:0000056,6.62e-07,58;CL:0000355,6.62e-07,58;CL:1000507,8.19e-07,10;CL:1000494,8.19e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.39e-15!86;UBERON:0001017!2.71e-14!82;UBERON:0000955!1.47e-13!69;UBERON:0006238!1.47e-13!69;UBERON:0000119!1.85e-13!312;UBERON:0000483!2.30e-13!309;UBERON:0000073!4.18e-13!94;UBERON:0001016!4.18e-13!94;UBERON:0002616!2.32e-12!59;UBERON:0001049!2.67e-12!57;UBERON:0005068!2.67e-12!57;UBERON:0006241!2.67e-12!57;UBERON:0007135!2.67e-12!57;UBERON:0003075!5.60e-12!86;UBERON:0007284!5.60e-12!86;UBERON:0000475!1.48e-11!365;UBERON:0003056!2.32e-11!61;UBERON:0002346!2.39e-11!90;UBERON:0002780!1.37e-10!41;UBERON:0001890!1.37e-10!41;UBERON:0006240!1.37e-10!41;UBERON:0000477!1.54e-10!286;UBERON:0000025!4.53e-10!194;UBERON:0004111!7.25e-10!241;UBERON:0003080!7.76e-10!42;UBERON:0002020!8.93e-10!34;UBERON:0003528!8.93e-10!34;UBERON:0002791!7.47e-09!33;UBERON:0000481!9.24e-09!347;UBERON:0001869!1.53e-08!32;UBERON:0001893!1.62e-08!34;UBERON:0000033!7.81e-08!123;UBERON:0002385!1.38e-07!63;UBERON:0001015!1.38e-07!63;UBERON:0000383!1.38e-07!63;UBERON:0000956!1.42e-07!25;UBERON:0000203!1.42e-07!25;UBERON:0001134!2.52e-07!61;UBERON:0002036!2.52e-07!61;UBERON:0003082!2.52e-07!61;UBERON:0000153!2.98e-07!129;UBERON:0007811!2.98e-07!129;UBERON:0004290!9.56e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.32e-09;34!UBERON:0002020;1.32e-09;34!UBERON:0002791;2.31e-09;32!UBERON:0000956;5.33e-09;25!UBERON:0000203;5.33e-09;25!UBERON:0001869;7.51e-09;32!UBERON:0002780;2.00e-08;41!UBERON:0001890;2.00e-08;41!UBERON:0000073;2.07e-08;53!UBERON:0002616;2.07e-08;53!UBERON:0001893;7.30e-08;34!UBERON:0002619;1.84e-07;22!UBERON:0000955;3.05e-07;68!UBERON:0006555;3.87e-07;15!UBERON:0004819;3.87e-07;15!UBERON:0001285;3.87e-07;15!UBERON:0007684;3.87e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.54e-16,81;UBERON:0000955,6.64e-15,68;UBERON:0006238,6.64e-15,68;UBERON:0003075,8.66e-15,82;UBERON:0007284,8.66e-15,82;UBERON:0000073,9.93e-15,53;UBERON:0002616,9.93e-15,53;UBERON:0001049,2.00e-14,56;UBERON:0005068,2.00e-14,56;UBERON:0006241,2.00e-14,56;UBERON:0007135,2.00e-14,56;UBERON:0002346,6.01e-14,86;UBERON:0001016,1.20e-13,89;UBERON:0003056,1.88e-13,61;UBERON:0010371,4.25e-12,104;UBERON:0000483,1.83e-11,306;UBERON:0002780,2.02e-11,41;UBERON:0001890,2.02e-11,41;UBERON:0003080,2.02e-11,41;UBERON:0006240,2.02e-11,41;UBERON:0000119,2.18e-11,309;UBERON:0003528,3.39e-11,34;UBERON:0002020,3.39e-11,34;UBERON:0000025,9.07e-11,192;UBERON:0002791,1.86e-10,32;UBERON:0001893,2.07e-09,34;UBERON:0001869,2.28e-09,32;UBERON:0000956,6.38e-09,25;UBERON:0000203,6.38e-09,25;UBERON:0004121,3.26e-08,171;UBERON:0000924,3.26e-08,171;UBERON:0006601,3.26e-08,171;UBERON:0004111,3.77e-08,240;UBERON:0007503,4.89e-08,78;UBERON:0010314,6.64e-08,132;UBERON:0004211,9.40e-08,15;UBERON:0009773,9.40e-08,15;UBERON:0001231,9.40e-08,15;UBERON:0001285,9.40e-08,15;UBERON:0007684,9.40e-08,15;UBERON:0004208,9.40e-08,15;UBERON:0002619,2.40e-07,22;UBERON:0007023,3.98e-07,114;UBERON:0006555,4.97e-07,16;UBERON:0004819,4.97e-07,16;UBERON:0002385,7.35e-07,64;UBERON:0001015,7.35e-07,64;UBERON:0000383,7.35e-07,64;UBERON:0004810,8.19e-07,10 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0,0,5.06599756336621,0,0.522371256399677,0.982935746006035,1.39560233594486,2.62129646556207,1.05506791291381,1.23766352960047,0.662794751455832,0.672325146451775,1.20538905604795,0,0.487932798790507,2.09305798730539,3.26401105990805,1.88072832886853,2.86235987131057,1.23186982565596,1.50651167513763,0.916960868975415,0.57470412614962,0.708397031823113,0.393364276848904,0.767658796194425,0.309632246632152,0,0.90361775633475,1.47901604066715,2.16908161624845,0.853015394924529,0.587200878669695,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0.28769239232215,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0,0,0.368277635987565,0.632924774881769,0.422510572623884,0.212604299965044,0.419317291016752,0.336985893439485,0.150176892841506,0,0.285012743741249,0,0,1.75996244461323,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0.205601498999509,0.167186495390678,0,0,0,1.22551502573691,0,0.664601683750863,0.270803863765016,0,0.780356085359269,2.13769275984779,1.93445012450094,0.579606171470105,0.14828656316206,0.267540828089713,0,1.81294948316106,0.383220493601921,0,0.253019692019503,0,0.651083453856419,0,0.150575119077773,0,1.24930726552346,1.18388626022008,1.64225599384209,0.403213486449465,0.267440195783507,0.144824403882799,0,1.34140171940727,1.53435074212236,3.61439152384566,1.00267582127178,0.869079113764942,0.795285947051099,0.486634870302636,1.41802225746102,0.443458794925128,0.87834785693126,3.66741411393595,1.82147644146271,0.741568885568859,0.324547393654683,0,0,0,0.571994910780128,0.74291500265913,0.198762407366705,0.860234595106124,1.73570250803797,2.26123176769604,0.838998872419812,0.825354125820202,2.29894463190492,1.03366703667732,1.42306505074684,1.00416183829401,1.20848795132744,6.0821768457481,0.732186172644509,1.10298924103761,0.81014194788176,0.714397826272638,0.898117490504679,0.788280363383256,4.5994991239765,0,0.366403487860815,0,0,0.872188104285069,0.496971951695318,0.12663051166458,0.132409180813219,0,0.709336764396714,1.12135520028461,1.06748995729705,0.49333509683432,0,0.404132016209064,0.817309515567294,1.05950199351452,0.576175924479999,1.17160715916898,0,1.71141546463335,0.448346041655403,0.352303495931295,0.161872944368132,0.561803226808994,0.61246251376468,0.122834317311768,0.413303124703062,2.37600571456411,0.741800787835671,0.910161361938026,2.15585442544872,0.841680569770331,0.250237039743928,0.277064115484183,0,0.612975591598039,0.300476117813194,1.02088964844019,0.179389635688862,1.92201649936711,1.27159140695737,0.900273288253207,2.06105058476878,0,1.30281799432113,0.337552664482532,1.46155507741798,0.252433774244115,1.10459878370759,1.61646056818812,0,0.806016785821122,1.52604533079439,0.386521706326594,0.272746120590835,0.573609190778008,0,0.132529768321485,0.348581828608555,0,0.252320850875628,0.36497735907583,0,1.28648187638577,2.76269842704961,1.39310378409594,1.44375896333917,0.473227200159376,0.505754070234305,0,0.220587945464788,0.653638332277218,0.237270619111097,0.404493924480493,1.17732879075208,0,0,0,0.4115740113314,0,0,0,0,1.32438929824395,0,2.05881372358231,0.329250856225877,0,0.402115889646523,0.370353780634118,1.95484983186195,0,0,2.89826012437692,0.70445216541493,0.144366447761074,0.462985512576611,0.380508304469197,1.58040879591855,3.43394464837949,0,0,0,0,0.335964256397719,0.141775097242386,0.268675568108545,0.871901815541886,1.53353071666084,0,0.616339038092582,0,0.144119953416961,0,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0.448524337381443,0.43596006883328,1.10007428731425,0,32.1890801266694,1.690605505112,0.26593811658487,1.04007436911366,0.514414748524284,0,0,3.14551586047925,0,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,0.904318131178758,0,0.199945982364114,0,0,0,0.958499421966331,0,0,0.144781306667579,1.02738161275192,0.358121926479791,1.45710687191585,0.591092280605782,0.215627574859517,0.128343036279748,2.28685161800217,0,1.54657762555539,1.67516265334349,3.18969375826582,0.749007023947182,0,0,2.08575535922538,1.00034104211935,1.08506009479894,1.87173775377726,0.892144943985809,1.26161932027148,0.35142424497814,0,0,2.0694614258501,1.32845119707087,1.10621501125022,1.12948698808508,3.91602314925481,1.37257369524342,0.206768026122887,0.431428401637234,0.106727557803444,8.18444442904901,4.99306318531491,2.41912234663744,0.992431231275107,0,0.280660094433074,0,0,0.160853921143607,0,0.462629081407967,0.532685175939381,1.56041596426237,0.519254429183621,0.581051892299796,0.725156697549733,0.601519410909855,0.736647911487171,0.68888668898764,0.728364672026868,0.524497659837696,2.70719767744447,1.84836809050595,1.56869953835371,2.92278449306521,1.79437769117889,1.13733384070897,1.02056223165909,0,3.08454505380579,1.62567862526312,1.50506932156456,0.509752546090077,2.49322802678617,1.79099803777743,1.75407901316748,1.3071772551245,2.05160100093111,1.31205858279882,0.650756789328606,0.206082023295445,0,0.165018999841176,0,1.30012049207304,1.6068392984416,3.86682873168488,0.924291702687866,1.22802939780904,0.137836572484531,0.537101224341368,0.725083469571143,0.255679882248303,1.60257664164127,0.495854746082934,0.384380134730212,0.127612712494584,0,2.32422774648643,0.31481234683064,8.3644472419272,1.23213432070436,1.59691809095107,6.95946393660058,0.74129687641568,0.429374660225974,1.48863347743867,0.316379424718726,0.571890581771475,1.27948895655667,1.28381696410176,1.27281299170375,8.63443504219153,2.51821440616641,1.64722217841633,0.824686816419805,0.606547444719948,0,0.842516912477962,1.95053495635836,1.94970791705028,5.28250733783777,0.9554993798559,0.565621727814851,0,3.85955740482287,2.65375590096488,1.31535265576129,1.15755106853338,1.9676842561399,1.21746226177622,0.92947049429925,2.53526042279017,1.14729081763241,1.08073945114433,0.7133421029625,3.19284957663538,1.05553817648832,0.658589785919804,1.89736586882858,1.04980416073495,0.48111056362756,0.670302275535787,4.3556393944529,0.376575203107117,0.43050537267123,1.68471475667626,0,0.689170200620878,0.507447609232169,0,0.569647187174163,0,0,0,0,0,0.640944426764839,0,0.490080431962063,0.557409525377156,1.00988449083511,0.924843963529383,0.478278818186467,0.59873811429845,0.957526850661834,0.635020748171649,0,1.12318871245384,0.456469358066384,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0.343505344755765,0.307240764308458,0.447352215784832,0.834245708559542,0,0.278406173895242,0,0.811367035427949,0.66614393599564,0,0.18714054040822,1.17206543417515,0.606802608747567,0.445773537109913,0.284136146806413,0,0,0,3.97659059106519,2.11004124615769,0.556543525114529,0.988823245360557,0,0.398495976502139,0,0.251932747854276,0.613612095012929,0.246169610922139,0,0.359473404589307,0.358042349351218,0,2.95930216910801,0,1.11136990144637,2.90799823828566,2.69027484669369,1.99613798001194,0,0.262379999988587,0,0.227586896570999,0.508507300585533,1.65471377237555,0.689486746482929,0.291604613383254,0.520874984799877,1.77148277162768,2.17073589525734,1.52581736317083,1.43753037910592,0.886642856860642,1.31631238292384,0.21787692703798,0.41827123283581,1.15425387755696,0.455768223388005,0.23056390438806,0.448788222048861,0.54323685961004,0,0.641183153813036,0.533034776018635,2.04386596391473,0.941881538370149,1.49590513710141,0.451191321234361,0.19606253431774,0,0.37950746544837,2.2251121057253,1.47698645169619,2.61172493054636,0.141353071433941,0,1.99052386215701,0.884575645033392,0,1.77912677208373,1.60633120630454,1.35748534357092,0.269604531922708,0.802577647298789,2.10838001152805,0.91227394607833,0.19566461893209,0.728341138602278,1.18375320854817,1.20990716048664,0,0.126373159256976,1.80388103297391,1.9700756365477,0,0,1.2557316736289,0,0.284609546029793,0.970722711091971,0.347119476670262,0.195984794828755,0.174118413160805,0.34945333648406,0.51595809741485,0.290268993867255,0.584714536689484,0.492692742319255,1.26085721434945,1.588610280447,1.80784592624426,0.274083849293502,0.596143835108969,0.443175571691151,0.195551382734803,0,0.426905989478705,0,0.288180834308212,0.572682980829578,0.343189995723929,0,0.124252535565433,0,0.271808412147228,0.523014231561666,1.12198039399954,2.02265412931063,1.80126086612937,1.09524303113594,0,0.859530882839914,0.525774708558629,0,0.916641696046735,0,0.599037001496973,0.858452096273142,0.223171457441873,0.604651252380536,1.08089965062721,0,0.315132729228895,0.329663433524666,0.26961417541674,0.196854963029498,0.169346664131569,3.18091875923721,1.63444087333891,0.482259445395058,1.37539436597234,0.415440338029185,0.449947783103001,0.77380195455795,0.789744236554321,0.335434687599266,0.0788057072991982,0.209818352539992,0.211200673038813,0,0,2.1440859791201,0,0.76280561296425,1.08599920350743,1.72844298240254,0.326587360109409,0,1.23138781124008,2.89659637035217,0.453248366080503,0,0,1.29282956361551,1.19009341568421,0,0,0.640724475406168,0.471612915298998,1.65695622138878,1.48849806543585,0.592834895693833,0,0.638341257770182,0,0,0,0,0.157054096250234,3.54427271986794,3.05065662254908,2.754200475543,2.86704597845036,1.44207766997908,0.310482014706917,0.415045904808692,0.37494122388632,0.303298235083296,0.570930667089935,1.41159491818903,0,0.434763085832475,0.447764408660622,0.701139929541673,2.21922344601045,0.568209015825267,0.251567901752575,0,0.457680136793847,0,0.621748802331122,0.147855149989634,0.318593534327405,0,1.08684069813382,0,0.265841714557995,0,0.450772826991655,0,0,0.909243296012797,0.537052785212442,0,0,0,0,0.673498977531838,0,0.192619830407303,0.857766365499703,1.04397716786085,0.453411851024545,0.694567422971502,0.734210113519403,0.71635536432595,0.308801447160972,0.438568099157414,0.176689145945881,0,0.506827321959218,0.76872455576384,0,0.911579868532147,3.45646090379327,1.16916185303633,1.59437808376036,0.163565394255844,2.29326894192489,1.2288645437686,0,1.79988656269437,0.746842107858986,0.516644938982447,0.567515953566836,1.10463570151104,0.559518030877778,0,0.383683113910955,0.107824811396682,0.629063767423586,0.109209638192014,0,0.850299680406731,0.123935764259002,0,0.636008701306837,0.630893960010027,0,0.352675943690684,0.3062454773532,0.578063025868136,1.41696576325585,1.27707087245721,1.02558182120378,1.51243017733031,0.691572524642179,1.29180516505481,1.42769420259154,0.687034029507179,0,0,1.03973099535304,0,0,1.5913297769302,0.676892955143315,1.0085253435176,0,0,0.655087670040387,0.591424344868181,0.337687923091973,3.12431239445539,2.48024155801421,0.507326481551255,2.7348740450911,0,1.48863353516788,1.05522746615772,0.383287282918786,2.14280734351315,2.35398605553177,1.21393120847326,0.91064876540519,0.620916591138472,0.806637912890455,0.685952037749674,0.135939465953663,0.526182188502793,1.41832609060762,0.778619813244484,1.25588948560822,0.785577949580009,0,0,0.863710364874486,2.38875843943525,1.1436247068265,1.10609528212909,0.697448552208751,0.173858272302579,0,0.207216164163037,0,0,0,0.473328002922261,0,0.846774100381858,0.22910686854405,0.31020638566432,0.955538938977433,0.223710863595585,0.196300467230486,0,0.647428837187895,0.205325613712494,2.3196288626764,0,0.467878926924211,0,0.83244063544298,0.22589216407792,0.219881033490858,0,0.385870790539723,0.655678681511872,0.470317296361523,3.43207650455468,0,0.981542335574726,2.67341760294377,0,0.679708458751268,0.375935671919414,0.193373663920732,1.39917618294901,0,0,0.160482733378337,0.730336388246517,0,1.72007499781742,0.315543124386369,0.407948941145488,1.30905207102113,0.5290268405154,0.743990036333503,1.38652688589425,0.865253124247578,1.51399709802095,1.20192129160065,1.14028650910293,1.1218771271618,0.534434810531121,1.37842349302267,0.250707539292375,31.1450449676964,8.30688803484153,4.1458471972939,0.517164979309476,0,0,0.645889098360061,0.372448285775147,0.897054900644907,0.190941474834495,0,0,0.684466602170562,0,0.215166616178029,0.332660356546013,0.651226148887796,1.28072815053259,0,0.179650404213174,0,1.22241444182866,0,0.665756774185513,0.402547587182052,0.641136984606466 | |||
|short_description=p8@QRICH1 | |||
}} |
Revision as of 18:52, 21 January 2014
Short description: | p8@QRICH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_QRICH1_5end |
Coexpression cluster: | C558_Mesenchymal_testis_Smooth_Endothelial_Placental_Tracheal_Hair |
Association with transcript: | 42bp_to_ENST00000469910_5end |
EntrezGene: | QRICH1 |
HGNC: | 24713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.24e-08 | 61 |
electrically active cell | 2.24e-08 | 61 |
kidney cell | 8.99e-08 | 17 |
kidney epithelial cell | 8.99e-08 | 17 |
epithelial cell of nephron | 9.40e-08 | 15 |
smooth muscle cell | 2.18e-07 | 43 |
smooth muscle myoblast | 2.18e-07 | 43 |
muscle cell | 3.01e-07 | 55 |
muscle precursor cell | 6.62e-07 | 58 |
myoblast | 6.62e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.62e-07 | 58 |
kidney tubule cell | 8.19e-07 | 10 |
nephron tubule epithelial cell | 8.19e-07 | 10 |