FFCP PHASE1:Hg19::chr3:137717649..137717664,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=51208 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2039 | |||
|TSSclassifier=strong | |||
|UniProt=P56856 | |||
|association_with_transcript=0bp_to_NM_001002026,uc003ero.1_5end | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_2_at_CLDN18_5end | |||
|id=chr3:137717649..137717664,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.88e-13!5;CL:0000148!8.37e-07!10;CL:0000541!8.37e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.29e-11;5!CL:0002535;6.15e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.29e-11,5;CL:0002535,6.15e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;7.13e-15;1 | |||
|ontology_enrichment_disease=DOID:3111!4.41e-08!1;DOID:3603!4.41e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.09e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.09e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004177!4.09e-09!7;UBERON:0005409!9.09e-09!35;UBERON:0002336!2.33e-08!1;UBERON:0001018!2.33e-08!1;UBERON:0002473!2.33e-08!1;UBERON:0005340!2.33e-08!1;UBERON:0002316!2.33e-08!1;UBERON:0003544!2.33e-08!1;UBERON:0001020!2.33e-08!1;UBERON:0005970!2.33e-08!1;UBERON:0002437!2.33e-08!1;UBERON:0002370!1.52e-07!4;UBERON:0005058!1.52e-07!4;UBERON:0009113!1.52e-07!4;UBERON:0003295!1.52e-07!4;UBERON:0005562!1.52e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.98e-14;22!UBERON:0002336;2.41e-14;1!UBERON:0011215;2.41e-14;1!UBERON:0001018;2.41e-14;1!UBERON:0002473;2.41e-14;1!UBERON:0005340;2.41e-14;1!UBERON:0003544;2.41e-14;1!UBERON:0005970;2.41e-14;1!UBERON:0002316;2.41e-14;1!UBERON:0001020;2.41e-14;1!UBERON:0002437;2.41e-14;1!UBERON:0000160;5.13e-12;17!UBERON:0002108;1.50e-11;4!UBERON:0004921;1.51e-08;33!UBERON:0006955;6.15e-08;2!UBERON:0004801;6.15e-08;2!UBERON:0005162;8.04e-08;2!UBERON:0000122;8.04e-08;2!UBERON:0000922;1.18e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,2.41e-14,1;UBERON:0011215,2.41e-14,1;UBERON:0001018,2.41e-14,1;UBERON:0002473,2.41e-14,1;UBERON:0005340,2.41e-14,1;UBERON:0003544,2.41e-14,1;UBERON:0005970,2.41e-14,1;UBERON:0002316,2.41e-14,1;UBERON:0001020,2.41e-14,1;UBERON:0002437,2.41e-14,1;UBERON:0005409,9.16e-13,25;UBERON:0000160,5.13e-12,17;UBERON:0002108,1.42e-11,4;UBERON:0006955,6.15e-08,2;UBERON:0004801,6.15e-08,2;UBERON:0005162,8.04e-08,2;UBERON:0000122,8.04e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580969714347592,1.7622379352613,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.2609073763036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.55025144421118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06149077404007,0,0,0,0,1.28062152663286,0,0,0,0,0,0,25.4080503702194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,64.6762574060238,0,0,0,2.74551996579143,0,0,0,0,0,0,0,0,0,0,0,287.072990873011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.0014503127836,0,0,0,0,0,0,0,0,0,0.603851374266694,0.463044948647668,1.5299169235277,7.05475944542284,0,0,0,0,0,0,0,0,0.199882311849858,0,0.352894871715692,0,539.718590914176,0,0,0,0,0,35.9738251550472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@CLDN18 | |||
}} |
Revision as of 21:34, 21 January 2014
Short description: | p2@CLDN18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_2_at_CLDN18_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 0bp_to_NM_001002026, uc003ero.1_5end |
EntrezGene: | CLDN18 |
HGNC: | 2039 |
UniProt: | P56856 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.29e-11 | 5 |
epithelial cell of cervix | 6.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 2.41e-14 | 1 |
central nervous system cell part cluster | 2.41e-14 | 1 |
axon tract | 2.41e-14 | 1 |
intercerebral commissure | 2.41e-14 | 1 |
dorsal telencephalic commissure | 2.41e-14 | 1 |
brain white matter | 2.41e-14 | 1 |
brain commissure | 2.41e-14 | 1 |
white matter | 2.41e-14 | 1 |
nervous system commissure | 2.41e-14 | 1 |
cerebral hemisphere white matter | 2.41e-14 | 1 |
gastrointestinal system | 9.16e-13 | 25 |
intestine | 5.13e-12 | 17 |
small intestine | 1.42e-11 | 4 |
uterine epithelium | 6.15e-08 | 2 |
cervix epithelium | 6.15e-08 | 2 |
multi cell component structure | 8.04e-08 | 2 |
neuron projection bundle | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.09e-08 | 2 |