FFCP PHASE1:Hg19::chr4:467892..467963,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170960 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31,29425 | |||
|TSSclassifier=strong | |||
|UniProt=D6RGC2,B4E159 | |||
|association_with_transcript=0bp_to_ENST00000451020,ENST00000505900,ENST00000506646_5end | |||
|description=CAGE_peak_1_at_ABCA11P_5end,CAGE_peak_1_at_ZNF721_5end | |||
|id=chr4:467892..467963,- | |||
|ontology_enrichment_celltype=CL:0000542!1.90e-17!53;CL:0000051!1.90e-17!53;CL:0000838!3.19e-17!52;CL:0000791!1.37e-10!18;CL:0000789!1.37e-10!18;CL:0002420!1.37e-10!18;CL:0002419!1.37e-10!18;CL:0000790!1.37e-10!18;CL:0000084!5.26e-09!25;CL:0000827!5.26e-09!25;CL:0000945!1.48e-08!24;CL:0000826!1.48e-08!24;CL:0000236!9.47e-08!14;CL:0000625!2.20e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.52e-10;18!CL:0000789;1.52e-10;18!CL:0002419;1.52e-10;18!CL:0000542;1.94e-10;53!CL:0000084;4.81e-09;25!CL:0000945;1.49e-08;24!CL:0000236;7.27e-08;13!CL:0000625;2.29e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.90e-17,53;CL:0000051,1.90e-17,53;CL:0000838,3.19e-17,52;CL:0000791,1.37e-10,18;CL:0000789,1.37e-10,18;CL:0002420,1.37e-10,18;CL:0002419,1.37e-10,18;CL:0000790,1.37e-10,18;CL:0000084,5.26e-09,25;CL:0000827,5.26e-09,25;CL:0000945,1.48e-08,24;CL:0000826,1.48e-08,24;CL:0000236,9.47e-08,14;CL:0000625,2.20e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.52e-10;18!CL:0000051;1.94e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.72e-16!115;UBERON:0000073!1.68e-11!94;UBERON:0001016!1.68e-11!94;UBERON:0001017!4.88e-11!82;UBERON:0005743!1.54e-10!86;UBERON:0001049!6.31e-10!57;UBERON:0005068!6.31e-10!57;UBERON:0006241!6.31e-10!57;UBERON:0007135!6.31e-10!57;UBERON:0002780!8.55e-09!41;UBERON:0001890!8.55e-09!41;UBERON:0006240!8.55e-09!41;UBERON:0003080!9.05e-09!42;UBERON:0000955!7.15e-08!69;UBERON:0006238!7.15e-08!69;UBERON:0002616!9.21e-08!59;UBERON:0002020!9.48e-07!34;UBERON:0003528!9.48e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.18e-15,114;UBERON:0001016,5.55e-12,89;UBERON:0001017,5.02e-11,81;UBERON:0001049,6.20e-10,56;UBERON:0005068,6.20e-10,56;UBERON:0006241,6.20e-10,56;UBERON:0007135,6.20e-10,56;UBERON:0000073,5.30e-09,53;UBERON:0002616,5.30e-09,53;UBERON:0002780,8.55e-09,41;UBERON:0001890,8.55e-09,41;UBERON:0003080,8.55e-09,41;UBERON:0006240,8.55e-09,41;UBERON:0000955,7.47e-08,68;UBERON:0006238,7.47e-08,68;UBERON:0003528,9.48e-07,34;UBERON:0002020,9.48e-07,34 | |||
|phase1_expression=11.6274162733156,11.9896293378951,15.7868932587488,11.0080628188443,18.7723659659461,6.97870819280295,12.6649939084155,8.84407822797563,15.4099520637905,10.3208253330634,18.1428303672831,11.1405099786388,9.75937819445278,30.8178218870516,21.8722267980424,14.7911532219391,10.8485015044316,13.8758917173601,11.2224543721817,15.2670112015217,9.58803248847989,9.09018692286455,22.0401710090914,22.5842801370259,19.08248121841,39.3529039601949,36.6989634841257,37.308910342684,29.5023207636678,36.4637928192352,13.4690027284986,17.4690032650996,10.843413076017,20.7062245693401,35.1701090634569,36.6796619817548,42.5720637035528,15.5118714388926,16.2441002450815,18.8799457522791,10.7479427635164,22.9964502873475,23.9545277899793,18.029381608666,19.2716731281293,15.2827958548324,17.4321777679263,18.5025549609822,17.6532631410209,20.1384674625505,18.4435708700952,26.0130452877444,18.2715210790408,20.0100251910986,20.3139729891513,16.7535682192918,14.191119803008,23.3712423822888,11.9372718024652,19.2557416245656,12.1474053901818,19.4612267110163,17.7522655283252,15.344091019177,16.5419266018293,13.6172453925874,14.9477339758938,20.3511418857962,13.5585558789252,19.9813737128707,13.3187890579341,13.9945501675275,26.2663781575934,22.8155709216897,26.7881417955955,23.0624510059213,25.2739420079614,25.3798948902146,24.9124659380474,27.3612233991599,22.2786678462981,23.0156833743439,65.1186104506894,64.4443561289315,70.2712310552208,75.5312493942718,64.864149899834,62.0732635150842,50.9004552044344,58.1972790266572,62.0442136329299,51.6768726646426,61.5459897281618,42.2948251452883,70.063570372692,33.4497787664348,64.3240948272234,46.7682807671506,44.409923783894,43.9700482877483,98.4285245233443,118.835399239418,68.189354942769,36.2083984876814,58.0373637725429,59.3710837484105,63.0973002572486,34.2003823667553,26.1419288595355,29.7632607332654,39.2417025255905,40.2826289171723,93.1239616657739,98.7225655651041,98.2633923766782,42.9442408823776,69.3629093419477,79.7215673519702,86.7857543626895,75.1814377804868,67.7126792010675,60.8289308446959,69.1139796566977,79.8636453603571,64.9639778072198,63.6930807998405,63.2268557629206,48.7888318603853,34.2323450602889,45.1852140114333,14.6284119788377,16.0968206328873,19.051521714686,17.7105184668437,8.02140657017423,12.4568006306308,11.1340032587154,11.1926020169606,26.7533532574312,18.8469987843179,19.3236528524877,21.1531206928806,13.1146303785315,20.763928795928,32.1301919718137,28.034887705182,13.0298801308488,40.0664248832975,40.6116386653891,32.6882601170017,13.9133685156694,18.9251610923347,8.33137203858226,11.3061588384802,13.8434813949269,12.9305479711832,14.8386426241136,27.1337597127795,20.9902094985159,20.0832367658802,22.1556124410031,25.8492515944294,15.3759096255347,14.3388601334889,17.012980905517,28.1294144094851,19.5340554184768,18.4682827992648,12.2653309972707,15.1882505530901,17.7705691612495,35.5807127077371,23.2668158488995,19.1881382942715,18.3879622127268,20.3875123779973,23.0391974615001,31.5520282823695,13.8320669057359,10.6528744027038,11.7423895302675,11.3467072271894,27.3865711151794,20.0718901383835,19.942352179842,15.8925299027178,18.43762958336,21.0889288650417,14.6715236110251,10.8389646093445,16.7382522218017,25.953024200272,19.5866262685439,17.8372524511856,26.1317339206263,18.4251475967652,25.2114906068868,10.6920257155385,12.3633464639278,9.10161361938026,13.6537446945085,23.5670559535693,18.3924224211787,23.5504498161555,13.608306247306,12.8724874235588,8.86404547548921,17.6954205729633,32.1107447883063,20.2879519377639,20.3454625113179,24.0072876867522,19.476928026065,25.2487729244717,14.517114793864,23.6286865137773,14.8104247845022,28.5250164895849,18.6861294243868,20.0441110455327,22.7206139210633,18.1353776809752,12.5474838309761,13.7215205745941,21.0014512854943,16.3478619371732,62.5725112444824,64.9395864775278,51.8224985198052,32.9642154948878,48.4456033681207,59.4913095293603,15.6449532329816,18.6539872075937,13.8134921352481,26.9333398258548,22.3782639317572,11.4757596038649,9.7779120245299,14.4606617930089,9.26469370952109,9.36881609597346,9.49082476444386,9.03369764673102,9.41863032601661,7.69494313892781,11.0723318193697,11.2193419042757,8.6430542379594,13.2307840246988,24.0834566161479,18.6737171168749,19.4960669204863,49.0024040350262,20.1701039210706,21.6175440976142,21.401305654682,8.99214026060957,18.6983888685633,28.2394757733515,14.9871820442749,14.5590869939141,17.3197610430328,22.4904985651649,11.7408694235822,17.9014395223732,14.3525508898749,22.0694816592134,15.8040879591855,15.4527509177077,7.63272718870932,15.9122900294682,12.4850176322532,23.4334584966942,21.501712409454,18.0054373497831,28.0318176059915,22.0881793270611,14.9519244874432,105.922596147628,16.9052993305394,38.9776857216651,41.9389064443358,47.0884276680397,16.7634440931326,4.96584953225761,3.51652341630141,8.55362230113526,11.2081967046623,11.1126931402249,17.4354123904653,14.0163855431701,10.899001720832,27.5751954686772,18.7443987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| |||
|short_description=p1@ABCA11P,p1@ZNF721 | |||
}} |
Revision as of 23:41, 21 January 2014
Short description: | p1@ABCA11P, p1@ZNF721 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABCA11P_5end, CAGE_peak_1_at_ZNF721_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000451020, ENST00000505900, ENST00000506646_5end |
EntrezGene: | ZNF721 |
HGNC: | 29425&submit=Submit 31, 29425 |
UniProt: | D6RGC2B4E159 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.90e-17 | 53 |
common lymphoid progenitor | 1.90e-17 | 53 |
lymphoid lineage restricted progenitor cell | 3.19e-17 | 52 |
mature alpha-beta T cell | 1.37e-10 | 18 |
alpha-beta T cell | 1.37e-10 | 18 |
immature T cell | 1.37e-10 | 18 |
mature T cell | 1.37e-10 | 18 |
immature alpha-beta T cell | 1.37e-10 | 18 |
T cell | 5.26e-09 | 25 |
pro-T cell | 5.26e-09 | 25 |
lymphocyte of B lineage | 1.48e-08 | 24 |
pro-B cell | 1.48e-08 | 24 |
B cell | 9.47e-08 | 14 |
CD8-positive, alpha-beta T cell | 2.20e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.18e-15 | 114 |
nervous system | 5.55e-12 | 89 |
central nervous system | 5.02e-11 | 81 |
neural tube | 6.20e-10 | 56 |
neural rod | 6.20e-10 | 56 |
future spinal cord | 6.20e-10 | 56 |
neural keel | 6.20e-10 | 56 |
regional part of nervous system | 5.30e-09 | 53 |
regional part of brain | 5.30e-09 | 53 |
regional part of forebrain | 8.55e-09 | 41 |
forebrain | 8.55e-09 | 41 |
anterior neural tube | 8.55e-09 | 41 |
future forebrain | 8.55e-09 | 41 |
brain | 7.47e-08 | 68 |
future brain | 7.47e-08 | 68 |
brain grey matter | 9.48e-07 | 34 |
gray matter | 9.48e-07 | 34 |