FFCP PHASE1:Hg19::chr4:41614909..41614926,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22998 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29191 | |||
|TSSclassifier=strong | |||
|UniProt=Q6NVB9,Q9UPQ0 | |||
|association_with_transcript=0bp_to_ENST00000381753,ENST00000396595,ENST00000509454,NM_001112719,NM_001112720,uc003gwb.1,uc003gwc.3,uc003gwd.3,uc011byu.1_5end | |||
|description=CAGE_peak_7_at_LIMCH1_5end | |||
|id=chr4:41614909..41614926,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.25e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.72e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.62e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!8.56e-35!86;UBERON:0003075!3.17e-32!86;UBERON:0007284!3.17e-32!86;UBERON:0001049!4.97e-32!57;UBERON:0005068!4.97e-32!57;UBERON:0006241!4.97e-32!57;UBERON:0007135!4.97e-32!57;UBERON:0000073!7.66e-32!94;UBERON:0001016!7.66e-32!94;UBERON:0001017!1.99e-31!82;UBERON:0002346!2.32e-30!90;UBERON:0007023!9.19e-28!115;UBERON:0002616!1.81e-25!59;UBERON:0000955!5.12e-25!69;UBERON:0006238!5.12e-25!69;UBERON:0002020!3.39e-22!34;UBERON:0003528!3.39e-22!34;UBERON:0001893!5.63e-22!34;UBERON:0003056!5.94e-22!61;UBERON:0002780!1.94e-21!41;UBERON:0001890!1.94e-21!41;UBERON:0006240!1.94e-21!41;UBERON:0002791!2.56e-21!33;UBERON:0003080!1.42e-20!42;UBERON:0001869!2.78e-20!32;UBERON:0000153!2.01e-18!129;UBERON:0007811!2.01e-18!129;UBERON:0004121!3.26e-18!169;UBERON:0000033!1.47e-17!123;UBERON:0000924!1.52e-17!173;UBERON:0006601!1.52e-17!173;UBERON:0000956!7.48e-16!25;UBERON:0000203!7.48e-16!25;UBERON:0000475!4.01e-15!365;UBERON:0000025!1.17e-14!194;UBERON:0002619!2.48e-13!22;UBERON:0003076!5.92e-13!15;UBERON:0003057!5.92e-13!15;UBERON:0001950!2.82e-12!20;UBERON:0004111!4.54e-12!241;UBERON:0004733!9.49e-11!12;UBERON:0002028!9.49e-11!12;UBERON:0007277!9.49e-11!12;UBERON:0000477!1.46e-10!286;UBERON:0000064!3.07e-10!219;UBERON:0000483!4.50e-10!309;UBERON:0000468!5.47e-10!659;UBERON:0000119!1.19e-09!312;UBERON:0004732!1.49e-09!13;UBERON:0000481!3.35e-08!347;UBERON:0002680!3.64e-08!9;UBERON:0001895!3.64e-08!9;UBERON:0010092!3.64e-08!9;UBERON:0002308!7.42e-08!9;UBERON:0000125!7.42e-08!9;UBERON:0007625!3.51e-07!11;UBERON:0000467!6.57e-07!625;UBERON:0000480!8.22e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.23e-25;34!UBERON:0002020;2.23e-25;34!UBERON:0002791;3.52e-25;32!UBERON:0001893;8.30e-25;34!UBERON:0001869;1.78e-24;32!UBERON:0000073;2.23e-23;53!UBERON:0002616;2.23e-23;53!UBERON:0002780;3.06e-21;41!UBERON:0001890;3.06e-21;41!UBERON:0000956;3.21e-20;25!UBERON:0000203;3.21e-20;25!UBERON:0002619;1.58e-16;22!UBERON:0001017;1.73e-16;75!UBERON:0000955;3.06e-16;68!UBERON:0001016;4.04e-15;83!UBERON:0001950;6.21e-15;20!UBERON:0004733;1.94e-13;12!UBERON:0002028;1.94e-13;12!UBERON:0004732;3.78e-12;13!UBERON:0000125;4.81e-11;9!UBERON:0002308;4.81e-11;9!UBERON:0002680;1.36e-09;9!UBERON:0001895;1.36e-09;9!UBERON:0002298;1.80e-09;6!UBERON:0007625;7.66e-09;11!UBERON:0009663;1.85e-08;7!UBERON:0002420;6.11e-08;9!UBERON:0007245;6.11e-08;9!UBERON:0010009;6.11e-08;9!UBERON:0010011;6.11e-08;9!UBERON:0000454;6.11e-08;9!UBERON:0007023;1.60e-07;114!UBERON:0000200;7.25e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,1.72e-44,82;UBERON:0007284,1.72e-44,82;UBERON:0001049,5.26e-44,56;UBERON:0005068,5.26e-44,56;UBERON:0006241,5.26e-44,56;UBERON:0007135,5.26e-44,56;UBERON:0001017,6.14e-43,81;UBERON:0002346,1.76e-41,86;UBERON:0000073,1.40e-40,53;UBERON:0002616,1.40e-40,53;UBERON:0001016,2.40e-38,89;UBERON:0000955,2.80e-35,68;UBERON:0006238,2.80e-35,68;UBERON:0010371,3.86e-32,104;UBERON:0010314,1.13e-30,132;UBERON:0003056,1.49e-30,61;UBERON:0003528,1.33e-29,34;UBERON:0002020,1.33e-29,34;UBERON:0001893,2.76e-29,34;UBERON:0002780,1.96e-28,41;UBERON:0001890,1.96e-28,41;UBERON:0003080,1.96e-28,41;UBERON:0006240,1.96e-28,41;UBERON:0002791,4.73e-27,32;UBERON:0001869,9.05e-27,32;UBERON:0004121,1.89e-23,171;UBERON:0000924,1.89e-23,171;UBERON:0006601,1.89e-23,171;UBERON:0007023,8.04e-23,114;UBERON:0000956,3.88e-20,25;UBERON:0000203,3.88e-20,25;UBERON:0003076,7.88e-17,15;UBERON:0003057,7.88e-17,15;UBERON:0002619,1.90e-16,22;UBERON:0001950,7.21e-15,20;UBERON:0000025,1.26e-13,192;UBERON:0004733,1.68e-13,12;UBERON:0002028,1.68e-13,12;UBERON:0007277,1.68e-13,12;UBERON:0004732,3.30e-12,13;UBERON:0011216,1.91e-11,223;UBERON:0000125,4.42e-11,9;UBERON:0002308,4.42e-11,9;UBERON:0004111,8.26e-10,240;UBERON:0000483,9.08e-10,306;UBERON:0002680,1.15e-09,9;UBERON:0001895,1.15e-09,9;UBERON:0010092,1.15e-09,9;UBERON:0000119,1.82e-09,309;UBERON:0002298,1.91e-09,6;UBERON:0007625,9.37e-09,11;UBERON:0009663,1.68e-08,7;UBERON:0002420,4.85e-08,9;UBERON:0007245,4.85e-08,9;UBERON:0010009,4.85e-08,9;UBERON:0010011,4.85e-08,9;UBERON:0000454,4.85e-08,9;UBERON:0000200,5.42e-07,6 | |||
|phase1_expression=2.90685406832891,4.06790995392868,2.96004248601539,12.0087958023756,4.46961094427288,6.97870819280295,0,0,0,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0.487932798790507,2.33930010345897,0.816002764977012,1.88072832886853,12.5943834337665,6.56997240349844,6.90484517771415,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,3.58015173161885,0.361439152384566,0,0.579386075843295,0,0.973269740605272,3.97046232089085,1.10864698731282,1.05401742831751,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0.74000264525148,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.89694817844431,0,0,0,0.206105058476878,0,0.558350568994769,1.35021065793013,6.04109431999431,0.504867548488229,1.19664868234989,0.80823028409406,2.4850671476163,3.42557133973977,0.169560592310488,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.414644220061482,1.7662459561294,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,5.77325368101093,7.53547632337999,2.58299127318808,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0.531876233169741,0,0,0,0,3.43147184779554,0,0,0,5.33087923113819,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,4.06551398755941,5.20559415430487,3.09315525111078,2.84777651068393,0,0,0,0,0.24538298343828,0,0,1.24782516918484,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,3.72161711728165,27.9300791384274,5.3325417942284,0.896974044789907,21.4917044608015,3.05622450172854,1.48418066444991,0.154209693802656,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.616122696835318,0.784349769176855,2.92278449306521,5.91089121800104,0,0,0,0,0,0,0.254876273045038,0,1.34324852833307,0,0,10.0015548795392,4.92021968549559,13.3405141812364,0.618246069886334,12.3618777504764,24.0102644768911,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,1.60257664164127,0,0,0,0,0,0,0,1.54016790088044,0.532306030317022,0,0.55597265731176,0.715624433709956,0,0,0,0,0,0,0,0.359744915166629,0,0,0.404364963146632,0,1.26377536871694,0,2.43713489631284,0,0,0,0,0,1.32687795048244,2.19225442626881,0,0,3.04365565444056,0.92947049429925,3.3803472303869,0,0,4.280052617775,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0.47748896947538,0.296964680832639,0,0,1.68803299692615,25.9349282703371,0,0,0.597743964753209,3.86797481743607,0,2.24991101504741,0,0,0,2.86433879480975,0,0.690503839458535,0,1.11136990144637,3.87733098438087,2.69027484669369,1.99613798001194,0,0,0,0,0.508507300585533,8.50995654364571,0,0,0,2.65722415744152,1.68835014075571,7.62908681585416,15.3705171304402,6.79759523593159,1.97446857438575,0.10893846351899,0,0.0769502585037971,0,0,0.179515288819544,0.325942115766024,2.23300811812344,0,5.86338253620498,0,0,0,0,0,0,0,0,9.07291677470516,14.2012543098459,0,0,0,0.442287822516696,0,0,0,0,6.7401132980677,3.21031058919516,4.91955336023212,0,0,0,8.68085686268659,1.20990716048664,1.22429104652196,3.6648216184523,0,0,0,0.330991955875499,0,0,2.56148591426813,0,0,0,0,0.698906672968121,0,0,0,0,0.387956065953678,0,4.51961481561065,0,0.19871461170299,4.11520173713212,0,0,0.213452994739353,0,0,0,0,0,0,0,0.407712618220842,1.04602846312333,0,0,4.80336230967832,2.87501295673185,0,3.0083580899397,0,5.02708322290058,2.97908551215189,0,0,0,0.446342914883745,0.739018197353989,5.04419836959365,0,0,0,0,0.590564889088493,0,1.59045937961861,2.17925449778521,0.321506296930038,0.275078873194468,1.24632101408756,0,0,3.76647251279753,0,1.41850273138557,5.77000469484979,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,1.58636928128176,0,0,7.62769442533148,7.27279309584795,0,0,0.320362237703084,0.943225830597996,0.414239055347196,0,0,0,0,2.72008901684737,3.5096585163178,3.36980134439808,1.31149052283922,0,3.54427271986794,1.83039397352945,2.50381861413,5.16068276121064,8.31967886526392,10.8668705147421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,1.07410557042488,0,0.398095888698616,0,0.343395705182793,1.01024846629776,0,0,0.214441591374926,0.260994291965212,0,0,0,1.07453304648892,4.94082315457555,0.657852148736121,0,0,8.10923715134749,11.5308683364576,11.7446316188608,1.21543982470953,1.24432592536558,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,3.5582187760905,0,0.109209638192014,0.169732529954025,0,0,0,0.636008701306837,0,0,0,0.6124909547064,3.3399197050159,2.8339315265117,0.957803154342908,1.43581454968528,18.4012338241854,2.35134658378341,1.61475645631851,0,0,0,0,0,0,0,0.994581110581374,0.376051641746286,0.201705068703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| |||
|short_description=p7@LIMCH1 | |||
}} |
Revision as of 00:52, 22 January 2014
Short description: | p7@LIMCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LIMCH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000381753, ENST00000396595, ENST00000509454, NM_001112719, NM_001112720, uc003gwb.1, uc003gwc.3, uc003gwd.3, uc011byu.1_5end |
EntrezGene: | LIMCH1 |
HGNC: | 29191 |
UniProt: | Q6NVB9Q9UPQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.72e-08 | 15 |