FFCP PHASE1:Hg19::chr4:42658982..42659008,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10396 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13531 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2Q0,Q4G1C1 | |||
|association_with_transcript=101bp_to_ENST00000264449,ENST00000510289_5end | |||
|coexpression_cluster_id=C4415 | |||
|description=CAGE_peak_3_at_ATP8A1_5end | |||
|id=chr4:42658982..42659008,- | |||
|ontology_enrichment_celltype=CL:0000542!1.62e-20!53;CL:0000051!1.62e-20!53;CL:0000838!1.64e-20!52;CL:0000738!1.19e-19!140;CL:0000037!4.07e-19!172;CL:0000566!4.07e-19!172;CL:0000988!5.99e-19!182;CL:0002032!7.22e-17!165;CL:0000837!7.22e-17!165;CL:0002087!2.41e-15!119;CL:0002031!2.71e-15!124;CL:0000084!7.32e-12!25;CL:0000827!7.32e-12!25;CL:0000791!9.08e-12!18;CL:0000789!9.08e-12!18;CL:0002420!9.08e-12!18;CL:0002419!9.08e-12!18;CL:0000790!9.08e-12!18;CL:0000625!7.62e-09!11;CL:0000945!5.34e-08!24;CL:0000826!5.34e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.39e-15;18!CL:0000789;1.39e-15;18!CL:0002419;1.39e-15;18!CL:0000084;1.77e-14;25!CL:0000542;3.07e-14;53!CL:0000625;1.65e-11;11!CL:0000945;2.72e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.95e-24,52;CL:0000542,2.92e-23,53;CL:0000051,2.92e-23,53;CL:0000791,1.67e-15,18;CL:0000789,1.67e-15,18;CL:0002420,1.67e-15,18;CL:0002419,1.67e-15,18;CL:0000790,1.67e-15,18;CL:0000738,2.05e-14,136;CL:0000084,2.25e-14,25;CL:0000827,2.25e-14,25;CL:0000988,1.91e-13,177;CL:0000037,3.72e-13,168;CL:0000625,1.64e-11,11;CL:0002087,5.45e-11,115;CL:0002032,9.08e-11,161;CL:0000837,9.08e-11,161;CL:0002031,5.46e-10,120;CL:0000945,1.74e-08,24;CL:0000826,1.74e-08,24;CL:0000236,8.82e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.39e-15;18!CL:0000051;3.07e-14;53!UBERON:0006601;2.54e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.33e-44!115;UBERON:0003080!1.23e-23!42;UBERON:0002780!2.25e-23!41;UBERON:0001890!2.25e-23!41;UBERON:0006240!2.25e-23!41;UBERON:0001049!4.76e-23!57;UBERON:0005068!4.76e-23!57;UBERON:0006241!4.76e-23!57;UBERON:0007135!4.76e-23!57;UBERON:0001893!1.50e-19!34;UBERON:0002791!7.27e-19!33;UBERON:0001017!8.45e-19!82;UBERON:0002020!9.13e-19!34;UBERON:0003528!9.13e-19!34;UBERON:0002616!9.89e-19!59;UBERON:0001869!1.35e-18!32;UBERON:0005743!1.51e-18!86;UBERON:0000955!2.85e-18!69;UBERON:0006238!2.85e-18!69;UBERON:0003075!4.41e-17!86;UBERON:0007284!4.41e-17!86;UBERON:0000073!4.70e-17!94;UBERON:0001016!4.70e-17!94;UBERON:0003056!7.96e-16!61;UBERON:0002619!3.39e-15!22;UBERON:0002346!4.56e-15!90;UBERON:0001950!5.89e-14!20;UBERON:0000956!1.37e-13!25;UBERON:0000203!1.37e-13!25;UBERON:0000178!6.21e-09!15;UBERON:0000179!6.21e-09!15;UBERON:0000463!6.21e-09!15;UBERON:0000153!1.84e-08!129;UBERON:0007811!1.84e-08!129;UBERON:0002420!8.49e-08!9;UBERON:0007245!8.49e-08!9;UBERON:0010009!8.49e-08!9;UBERON:0010011!8.49e-08!9;UBERON:0000454!8.49e-08!9;UBERON:0000033!7.44e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.22e-21;41!UBERON:0001890;1.22e-21;41!UBERON:0001893;2.70e-21;34!UBERON:0001869;4.29e-21;32!UBERON:0002791;6.65e-21;32!UBERON:0003528;1.88e-20;34!UBERON:0002020;1.88e-20;34!UBERON:0002619;3.11e-20;22!UBERON:0001950;1.52e-18;20!UBERON:0000956;8.39e-17;25!UBERON:0000203;8.39e-17;25!UBERON:0000073;2.72e-16;53!UBERON:0002616;2.72e-16;53!UBERON:0007023;1.47e-13;114!UBERON:0000178;9.74e-12;15!UBERON:0000179;9.74e-12;15!UBERON:0000463;9.74e-12;15!UBERON:0001017;4.56e-11;75!UBERON:0000955;7.53e-11;68!UBERON:0002420;4.30e-10;9!UBERON:0007245;4.30e-10;9!UBERON:0010009;4.30e-10;9!UBERON:0010011;4.30e-10;9!UBERON:0000454;4.30e-10;9!UBERON:0001016;4.38e-09;83!UBERON:0000125;1.12e-08;9!UBERON:0002308;1.12e-08;9!UBERON:0009663;3.12e-08;7!UBERON:0000200;2.15e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.43e-47,114;UBERON:0002780,4.55e-30,41;UBERON:0001890,4.55e-30,41;UBERON:0003080,4.55e-30,41;UBERON:0006240,4.55e-30,41;UBERON:0001049,1.20e-29,56;UBERON:0005068,1.20e-29,56;UBERON:0006241,1.20e-29,56;UBERON:0007135,1.20e-29,56;UBERON:0000073,3.15e-28,53;UBERON:0002616,3.15e-28,53;UBERON:0001893,7.63e-25,34;UBERON:0003528,8.45e-24,34;UBERON:0002020,8.45e-24,34;UBERON:0001869,1.54e-23,32;UBERON:0002791,2.93e-23,32;UBERON:0000955,2.94e-22,68;UBERON:0006238,2.94e-22,68;UBERON:0001017,1.87e-21,81;UBERON:0002619,3.43e-20,22;UBERON:0001016,5.72e-20,89;UBERON:0003075,6.40e-20,82;UBERON:0007284,6.40e-20,82;UBERON:0001950,1.71e-18,20;UBERON:0003056,3.20e-18,61;UBERON:0002346,4.18e-18,86;UBERON:0000956,9.10e-17,25;UBERON:0000203,9.10e-17,25;UBERON:0010371,2.33e-14,104;UBERON:0000178,1.24e-11,15;UBERON:0000179,1.24e-11,15;UBERON:0000463,1.24e-11,15;UBERON:0002420,4.38e-10,9;UBERON:0007245,4.38e-10,9;UBERON:0010009,4.38e-10,9;UBERON:0010011,4.38e-10,9;UBERON:0000454,4.38e-10,9;UBERON:0010314,2.39e-09,132;UBERON:0000125,1.45e-08,9;UBERON:0002308,1.45e-08,9;UBERON:0009663,3.22e-08,7;UBERON:0000200,2.12e-07,6;UBERON:0011216,6.87e-07,223;UBERON:0004121,7.72e-07,171;UBERON:0000924,7.72e-07,171;UBERON:0006601,7.72e-07,171 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,4.81404456212093,3.7766271146975,4.32909297225236,8.65401409067589,33.3931576344575,8.20525453575203,0,0,0,7.12698245338775,4.97592313705975,0,7.75593571944628,7.42014455639524,10.8505435357926,0.895661896959697,2.91504299417082,0.77272670290256,0.436194716338694,1.13362783106643,0.727752183563449,0.929716147622738,0,0.619412741790207,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,0,0.188242339542605,0.545812300115692,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0,0.199463657621632,0.852449501065388,0,0,0,1.00499466102697,0,0,2.42159801053347,0.368277635987565,0.316462387440884,0.211255286311942,0,0.209658645508376,0.44931452458598,0.150176892841506,0,0,0,0.547992461293902,0,3.27683166757279,2.66852776159066,2.98711155796555,4.40435585739614,5.74752439954483,4.62731410949403,2.86216126360609,6.83055562931338,11.7447437874188,8.41001101875504,1.32171328579026,10.0891541336676,1.31692042387539,5.50787356318733,5.89516144123747,3.28962398399215,3.00935691703221,5.21475626613745,1.4203434172042,7.79306913631645,2.67385096524417,7.36514768687093,1.55073726208535,4.33286182024025,0.640456598628376,1.95089021339817,1.15106533222573,1.93445012450094,4.34704628602579,7.26604159494096,2.94294910898684,3.1360657141493,2.26618685395132,11.1133943144557,2.06176467289578,4.80737414837055,10.8312240870193,13.0216690771284,15.207232711174,8.73335690651082,10.4949021146623,21.2382235138988,13.969857870597,12.3169199538157,51.0065060358573,46.2671538705468,51.9919609939248,0,0,0,0.361439152384566,0,0.144846518960824,0,0,1.32348744029695,0.665188192387692,0.702678285545008,2.42311289670768,0,0,8.11368484136708,10.447784237956,4.91944453919801,10.2550968451297,10.8679033048224,15.2297575545122,0.198762407366705,0,0,0,0,0.550236083880135,0,0.258416759169329,0,0,0,0,0,0,0,0.267899184852239,0.44905874525234,0.225222960966644,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0,1.14734648299525,0.354668382198357,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,3.09024169590255,0,0.343135620597051,0,0,0,0,0,0,0,0,0.587043471179108,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0.492434012174795,4.44608103764552,0.891786973732369,0,0,0,0,0,0,12.8092441852945,5.28290604079356,0.414656231081544,0.576479813667846,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0,2.89921674427965,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,1.12085143993527,48.666597769876,40.7536116484488,56.4709359630893,0.254094624222463,3.90419561572865,0,0.837581326671744,0.637938751653163,0,0,6.21623270154053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7482101159539,7.33428282783297,21.2387840028854,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0.261435451024901,0.256450125116389,0,0.325378394664303,1.23649213977267,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0.267096106940212,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,1.239293992399,0,0,0,0,0.354761064070598,0.633322905892992,0,0,0,0,0,0,0.941438007767792,0,0,0,0,2.02979043692868,2.29391162142713,3.98753031021914,3.81170840732462,6.17043409629291,1.29694662238543,3.24018862342869,7.13812658664843,0.320472213382419,0,0,0.557409525377156,2.74111504655245,15.7223473799995,0.478278818186467,0.199579371432817,1.34053759092657,0.846694330895531,0.649243880549111,3.08876895924805,7.30350972906215,0,2.50634477090067,0.50787533340481,0,0,0,4.80907482658071,0,0,0,0,5.01131113011436,4.92349595790849,0.811367035427949,2.33150377598474,1.4098700508785,0.748562161632879,3.66270448179735,0,1.5602073798847,0.852408440419239,0,0,0,21.8712482508586,18.2870241333667,0.111308705022906,0,0.422250816255987,0.996239941255349,9.11736921252787,4.03092396566842,0.102268682502155,0.492339221844278,0,0,0,0,1.08507746200627,7.18449277040819,0,7.75466196876175,21.7077349698732,11.9768278800717,1.30213880542617,0.0874599999961957,2.17499872630438,0,0.508507300585533,0,0,0,2.60437492399938,52.2587417630165,71.2724952276161,3.05163472634166,0.774054819518572,0,25.2293206727068,0,0,1.61595542857974,0,0.23056390438806,0,0,0.31900115973192,0.0915975934018623,1.06606955203727,1.02193298195737,1.41282230755522,0,0,0,0,0,0.317873157960757,0,0,0.282706142867882,1.081943198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| |||
|short_description=p3@ATP8A1 | |||
}} |
Revision as of 00:54, 22 January 2014
Short description: | p3@ATP8A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATP8A1_5end |
Coexpression cluster: | C4415_caudate_putamen_cord_Natural_CD8_nucleus_Basophils |
Association with transcript: | 101bp_to_ENST00000264449, ENST00000510289_5end |
EntrezGene: | ATP8A1 |
HGNC: | 13531 |
UniProt: | Q9Y2Q0Q4G1C1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.95e-24 | 52 |
lymphocyte | 2.92e-23 | 53 |
common lymphoid progenitor | 2.92e-23 | 53 |
mature alpha-beta T cell | 1.67e-15 | 18 |
alpha-beta T cell | 1.67e-15 | 18 |
immature T cell | 1.67e-15 | 18 |
mature T cell | 1.67e-15 | 18 |
immature alpha-beta T cell | 1.67e-15 | 18 |
leukocyte | 2.05e-14 | 136 |
T cell | 2.25e-14 | 25 |
pro-T cell | 2.25e-14 | 25 |
hematopoietic cell | 1.91e-13 | 177 |
hematopoietic stem cell | 3.72e-13 | 168 |
CD8-positive, alpha-beta T cell | 1.64e-11 | 11 |
nongranular leukocyte | 5.45e-11 | 115 |
hematopoietic oligopotent progenitor cell | 9.08e-11 | 161 |
hematopoietic multipotent progenitor cell | 9.08e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 5.46e-10 | 120 |
lymphocyte of B lineage | 1.74e-08 | 24 |
pro-B cell | 1.74e-08 | 24 |
B cell | 8.82e-07 | 14 |