FFCP PHASE1:Hg19::chr4:154707015..154707056,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:154707015..154707056,+ | |||
|id=chr4:154707015..154707056,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.54e-10!5;CL:0000710!1.06e-07!20;CL:0000075!1.08e-07!27;CL:0002580!2.11e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.49e-20;3!CL:0002322;4.27e-20;5!CL:0002617;1.35e-13;2!CL:0000136;6.87e-12;13!CL:0000710;1.26e-10;20!CL:0000075;2.28e-10;27!CL:0000064;4.00e-09;3!CL:0000067;4.00e-09;3!CL:0005012;4.00e-09;3!CL:0002304;4.00e-09;3!CL:0000342;1.85e-07;1!CL:0002565;1.85e-07;1!CL:0002616;1.85e-07;1!CL:0002321;8.56e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.65e-20,3;CL:0002322,1.21e-19,5;CL:0002617,1.12e-13,2;CL:0000710,1.46e-10,20;CL:0000136,2.24e-10,15;CL:0000075,2.48e-10,27;CL:0000064,4.01e-09,3;CL:0000067,4.01e-09,3;CL:0005012,4.01e-09,3;CL:0002304,4.01e-09,3;CL:0002616,1.30e-07,1;CL:0000342,2.17e-07,1;CL:0002565,2.17e-07,1;CL:0000133,8.10e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.72e-08;1!UBERON:0010115;4.72e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-11!115;UBERON:0001443!8.79e-09!11;UBERON:0000488!2.43e-08!4;UBERON:0000310!2.94e-07!10;UBERON:0003075!4.73e-07!86;UBERON:0007284!4.73e-07!86;UBERON:0000153!5.13e-07!129;UBERON:0007811!5.13e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001443;7.94e-28;11!UBERON:0000310;1.15e-22;10!UBERON:0000488;2.22e-14;4!UBERON:0002203;9.20e-10;6!UBERON:0001768;9.20e-10;6!UBERON:0002200;9.20e-10;6!UBERON:0001778;4.00e-09;3!UBERON:0001775;4.00e-09;3!UBERON:0007625;4.17e-09;11!UBERON:0000922;1.16e-08;49!UBERON:0002363;4.72e-08;1!UBERON:0007029;8.01e-08;1!UBERON:0002426;8.01e-08;1!UBERON:0003831;8.01e-08;1!UBERON:0003898;8.01e-08;1!UBERON:0004830;8.01e-08;1!UBERON:0003830;8.01e-08;1!UBERON:0005175;8.01e-08;1!UBERON:0001774;8.01e-08;1!UBERON:0001103;8.01e-08;1!UBERON:0002506;1.85e-07;1!UBERON:0001769;1.85e-07;1!UBERON:0001801;3.53e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001443,7.22e-28,11;UBERON:0000310,9.59e-23,10;UBERON:0000488,2.50e-14,4;UBERON:0002203,9.94e-10,6;UBERON:0001768,9.94e-10,6;UBERON:0002200,9.94e-10,6;UBERON:0001778,4.01e-09,3;UBERON:0001775,4.01e-09,3;UBERON:0007625,4.18e-09,11;UBERON:0002363,4.89e-08,1;UBERON:0007645,4.89e-08,1;UBERON:0007647,4.89e-08,1;UBERON:0010115,4.89e-08,1;UBERON:0007029,8.84e-08,1;UBERON:0002426,9.44e-08,1;UBERON:0003831,9.44e-08,1;UBERON:0003898,9.44e-08,1;UBERON:0004830,9.44e-08,1;UBERON:0003830,9.44e-08,1;UBERON:0005175,9.44e-08,1;UBERON:0001774,9.44e-08,1;UBERON:0001103,9.44e-08,1;UBERON:0010084,9.44e-08,1;UBERON:0002506,2.17e-07,1;UBERON:0001769,2.17e-07,1;UBERON:0001801,3.54e-07,14;UBERON:0000915,8.54e-07,52 | |||
|phase1_expression=2.54349730978779,1.2846031433459,0,0,1.34088328328186,1.74467704820074,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,2.19418305034661,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70162670895322,1.10864698731282,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0,0,0.204154171254893,0.737005903870608,0,0,0,0,0,0,0.375355559615893,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,1.09776335516636,1.06023814657188,1.04574548582567,2.48786532036889,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,1.44331342025273,0.927443239800615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87173775377726,1.07057393278297,0.473107245101804,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,4.46594054073798,3.99001130548962,3.36792113319688,0,0,0.804269605718038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0.137836572484531,0.429680979473094,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0,0.994147647766298,0.140669416410513,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.185536196323703,1.99613798001194,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.337005664903385,2.40773294189637,0,0,0,0,0.394584402849391,1.20990716048664,0,4.48624715362264,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.189932387867636,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92903778158023,2.47570985875021,0.83088067605837,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.39246546425257,0,0,2.73947616152849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4285549652957,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0.436350690340377,0,0.371995018166751,0,0,1.13549782351571,0.109265571963696,0,0.305966489225945,0,0.0918948995348449,0,0,0,0,0,0.426467963801962,0.23806443146374,0,0,0.112131862580613,0,0.606351566874658,0.217716747896961,0.684466602170562,0.202056159043763,0.215166616178029,4.65724499164419,0,0,0,0,4.69281884806909,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr4:154707015..154707056,+ | |||
}} |
Revision as of 03:33, 22 January 2014
Short description: | p@chr4:154707015..154707056, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:154707015..154707056, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.65e-20 | 3 |
embryonic stem cell | 1.21e-19 | 5 |
adipocyte of breast | 1.12e-13 | 2 |
neurecto-epithelial cell | 1.46e-10 | 20 |
fat cell | 2.24e-10 | 15 |
columnar/cuboidal epithelial cell | 2.48e-10 | 27 |
ciliated cell | 4.01e-09 | 3 |
ciliated epithelial cell | 4.01e-09 | 3 |
multi-ciliated epithelial cell | 4.01e-09 | 3 |
non-pigmented ciliary epithelial cell | 4.01e-09 | 3 |
perirenal adipocyte cell | 1.30e-07 | 1 |
pigment cell (sensu Vertebrata) | 2.17e-07 | 1 |
iris pigment epithelial cell | 2.17e-07 | 1 |
neurectodermal cell | 8.10e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
chest | 7.22e-28 | 11 |
breast | 9.59e-23 | 10 |
atypical epithelium | 2.50e-14 | 4 |
vasculature of eye | 9.94e-10 | 6 |
uvea | 9.94e-10 | 6 |
vasculature of head | 9.94e-10 | 6 |
ciliary epithelium | 4.01e-09 | 3 |
ciliary body | 4.01e-09 | 3 |
pigment epithelium of eye | 4.18e-09 | 11 |
dura mater | 4.89e-08 | 1 |
future meninx | 4.89e-08 | 1 |
ectomeninx | 4.89e-08 | 1 |
future dura mater | 4.89e-08 | 1 |
surface | 8.84e-08 | 1 |
chest muscle | 9.44e-08 | 1 |
respiratory system muscle | 9.44e-08 | 1 |
skeletal muscle of trunk | 9.44e-08 | 1 |
respiratory system skeletal muscle | 9.44e-08 | 1 |
thoracic segment muscle | 9.44e-08 | 1 |
chest organ | 9.44e-08 | 1 |
muscle of trunk | 9.44e-08 | 1 |
diaphragm | 9.44e-08 | 1 |
future diaphragm | 9.44e-08 | 1 |
iris epithelium | 2.17e-07 | 1 |
iris | 2.17e-07 | 1 |
anterior segment of eyeball | 3.54e-07 | 14 |
thoracic segment of trunk | 8.54e-07 | 52 |