FFCP PHASE1:Hg19::chr4:154926484..154926525,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:154926484..154926525,+ | |||
|id=chr4:154926484..154926525,+ | |||
|ontology_enrichment_celltype=CL:0000136!3.35e-09!15;CL:0002334!4.43e-09!12;CL:0002580!9.08e-09!3;CL:0002615!5.21e-08!3;CL:0002579!5.99e-08!3;CL:0000594!6.73e-08!3;CL:0002570!5.04e-07!8;CL:0000197!5.17e-07!6;CL:0000098!5.17e-07!6;CL:0002167!5.17e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002580;8.57e-39;3!CL:0002617;7.19e-26;2!CL:0002334;3.82e-17;12!CL:0000136;3.40e-09;13!CL:0000197;3.71e-09;6!CL:0000098;3.71e-09;6!CL:0002167;3.71e-09;6!CL:0000680;4.50e-08;7!CL:0002549;1.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,7.56e-39,3;CL:0002617,5.96e-26,2;CL:0002334,3.60e-17,12;CL:0000197,2.89e-09,6;CL:0000098,2.89e-09,6;CL:0002167,2.89e-09,6;CL:0000136,5.25e-08,15;CL:0002549,1.87e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010115;3.98e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;1.18e-13;1!DOID:5662;1.18e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,6.65e-14,1;DOID:5662,1.61e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!2.76e-14!6;UBERON:0002358!2.76e-14!6;UBERON:0003684!2.76e-14!6;UBERON:0001178!2.76e-14!6;UBERON:0005284!5.67e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.68e-31;10!UBERON:0001443;1.20e-28;11!UBERON:0002363;3.98e-14;1!UBERON:0007195;1.18e-13;1!UBERON:0003688;3.71e-09;6!UBERON:0002358;3.71e-09;6!UBERON:0003684;3.71e-09;6!UBERON:0001178;3.71e-09;6!UBERON:0002360;1.05e-07;2!UBERON:0000094;1.05e-07;2!UBERON:0010743;1.05e-07;2!UBERON:0005629;1.81e-07;2!UBERON:0005358;1.81e-07;2!UBERON:0001886;1.81e-07;2!UBERON:0004086;1.81e-07;2!UBERON:0005282;1.81e-07;2!UBERON:0005281;1.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.44e-31,10;UBERON:0001443,1.04e-28,11;UBERON:0002363,3.98e-14,1;UBERON:0007645,3.98e-14,1;UBERON:0007647,3.98e-14,1;UBERON:0010115,3.98e-14,1;UBERON:0007195,1.42e-13,1;UBERON:0003688,4.37e-09,6;UBERON:0002358,4.37e-09,6;UBERON:0003684,4.37e-09,6;UBERON:0001178,4.37e-09,6;UBERON:0002360,1.05e-07,2;UBERON:0000094,1.05e-07,2;UBERON:0010743,1.05e-07,2;UBERON:0005629,1.87e-07,2;UBERON:0005358,1.87e-07,2;UBERON:0001886,1.87e-07,2;UBERON:0004086,1.87e-07,2;UBERON:0005282,1.87e-07,2;UBERON:0005281,1.87e-07,2 | |||
|phase1_expression=3.27021082687002,1.2846031433459,0.422863212287913,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0,0,0.873765488520689,0.527533956456907,0.123766352960047,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0,0,0,0,0,0,0.605429710579726,1.15235184896,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0.772921620136887,0.18611685633159,0,0.0974370051611986,0,0.276149695926898,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.65147236858747,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,1.01346914667305,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45579603071565,0.713715955188647,1.41932173530541,0.937131319941706,0.601892199455438,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.604780586659361,5.45837177201309,6.1384789315225,3.64858122762996,1.15325234330131,0.511707249066704,0.482561763430822,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0,0,0,0,0,0,0.460511024178389,0,3.11518710117994,0.870100163485371,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0.632758849437452,0,0,0,0,0,0.899362287916574,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.99173979065055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.561111741760736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.467426619694449,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0.358177682162975,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.40341013740704,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,1.02892805662451,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:154926484..154926525,+ | |||
}} |
Revision as of 03:34, 22 January 2014
Short description: | p@chr4:154926484..154926525, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:154926484..154926525, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 7.56e-39 | 3 |
adipocyte of breast | 5.96e-26 | 2 |
preadipocyte | 3.60e-17 | 12 |
receptor cell | 2.89e-09 | 6 |
sensory epithelial cell | 2.89e-09 | 6 |
olfactory epithelial cell | 2.89e-09 | 6 |
fat cell | 5.25e-08 | 15 |
fibroblast of choroid plexus | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
breast | 1.44e-31 | 10 |
chest | 1.04e-28 | 11 |
dura mater | 3.98e-14 | 1 |
future meninx | 3.98e-14 | 1 |
ectomeninx | 3.98e-14 | 1 |
future dura mater | 3.98e-14 | 1 |
stroma of bone marrow | 1.42e-13 | 1 |
omentum | 4.37e-09 | 6 |
peritoneum | 4.37e-09 | 6 |
abdominal cavity | 4.37e-09 | 6 |
visceral peritoneum | 4.37e-09 | 6 |
meninx | 1.05e-07 | 2 |
membrane organ | 1.05e-07 | 2 |
meningeal cluster | 1.05e-07 | 2 |
vascular plexus | 1.87e-07 | 2 |
ventricle of nervous system | 1.87e-07 | 2 |
choroid plexus | 1.87e-07 | 2 |
brain ventricle | 1.87e-07 | 2 |
ventricular system of brain | 1.87e-07 | 2 |
ventricular system of central nervous system | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 6.65e-14 | 1 |
pleomorphic carcinoma | 1.61e-13 | 1 |