FFCP PHASE1:Hg19::chr5:173043615..173043688,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91272 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25114 | |||
|TSSclassifier=strong | |||
|UniProt=Q96IK1,C9JNZ5 | |||
|association_with_transcript=0bp_to_ENST00000311086,ENST00000471339,ENST00000480951,NM_001159651,NM_138369,uc003mcq.2,uc003mcr.2_5end | |||
|description=CAGE_peak_1_at_BOD1_5end | |||
|id=chr5:173043615..173043688,- | |||
|ontology_enrichment_celltype=CL:0000066!2.07e-19!254;CL:0002321!5.00e-14!248;CL:0000220!2.81e-13!246;CL:0000055!7.98e-11!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.47e-19,253;CL:0002321,1.02e-14,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!9.70e-18!143;DOID:305!2.50e-16!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.70e-18,143;DOID:305,2.50e-16,106 | |||
|ontology_enrichment_uberon=UBERON:0000481!9.15e-15!347;UBERON:0000475!1.18e-13!365;UBERON:0000468!1.43e-11!659;UBERON:0002100!1.72e-11!216;UBERON:0000466!7.25e-10!126;UBERON:0003104!1.30e-09!238;UBERON:0009142!1.30e-09!238;UBERON:0000119!9.52e-09!312;UBERON:0000922!9.90e-09!612;UBERON:0000464!1.01e-08!104;UBERON:0004119!1.52e-08!169;UBERON:0000925!1.52e-08!169;UBERON:0006595!1.52e-08!169;UBERON:0001048!1.69e-08!168;UBERON:0000483!3.39e-08!309;UBERON:0001007!9.62e-08!155;UBERON:0001555!9.62e-08!155;UBERON:0007026!9.62e-08!155;UBERON:0000923!4.52e-07!604;UBERON:0005291!4.52e-07!604;UBERON:0006598!4.52e-07!604;UBERON:0002532!4.52e-07!604;UBERON:0002050!4.61e-07!605;UBERON:0005423!4.61e-07!605;UBERON:0002553!9.15e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,9.21e-12,199;UBERON:0000119,9.54e-09,309;UBERON:0000483,3.40e-08,306;UBERON:0003104,1.96e-07,160;UBERON:0009142,1.96e-07,160;UBERON:0004119,6.45e-07,160;UBERON:0000925,6.45e-07,160;UBERON:0006595,6.45e-07,160;UBERON:0005177,9.80e-07,101 | |||
|phase1_expression=68.1293922264587,64.4442576911859,69.0676580070259,62.0454449789409,78.2181915247754,61.0636966870258,75.9899634504932,72.0160655706587,57.4608382039645,47.1809158082897,43.9614735822629,48.0571018686379,61.7214729054581,36.8823731820939,43.7444535960849,45.0457848122689,63.2829254425176,64.9975980444762,57.0881374584893,69.4402767553084,63.0362135944742,65.8254915103984,38.6418582626927,45.9898068244891,42.8100401018278,23.9173959991087,20.3609461835865,18.1034797021462,20.454942396143,14.9693465257913,20.280912154406,34.0185853057203,39.759181278729,105.749646907701,36.1771826710009,34.1206157969812,30.5344456908241,14.9578760303607,20.2549891944843,17.577880527984,20.824139104313,25.5875996154994,19.0605920049298,18.6109745637843,24.5619363397726,24.0158220575938,19.5240391000775,30.8375916016369,25.0862160425034,16.3984663623626,17.6750887505079,19.8645073106412,15.5135556331478,23.8829332926016,40.6279459783025,19.5772033124309,23.7428350550326,21.348731022283,10.4068523406107,16.0464513538047,8.95071976118658,17.482118909896,19.3479747892983,17.9014395223732,9.86711411337186,11.3477044938228,18.6846674698673,15.0749199154046,18.7733850631273,19.1126183340503,12.7133895553007,15.4676607114777,16.456044146926,21.3367839175061,22.7486600962597,23.4817682969381,19.4328531883437,23.727949068958,17.5190889499817,21.3759557805936,21.2840844603026,18.8144078377573,49.2789484491704,32.2221780644658,37.3593886622693,33.2849573601876,27.2269271184488,29.3123744376786,29.0859744025339,24.8053976179195,29.0298614245819,25.2511991429504,32.4932243906445,17.1822727152734,11.7706798226123,19.4904222733557,19.0808477010418,22.4016134767024,16.4481199199607,14.7124115943797,38.7847497293973,42.610302516126,38.9653456815823,12.1437398004839,20.3278076157638,20.3811183016931,15.7066240983709,12.0405840542135,15.6071217071854,17.759293697197,14.9229009604358,18.5473974870434,35.4404885957324,27.8242461213302,29.2699466653935,11.2176249270591,19.544245173698,22.3357839563709,21.0006344376187,28.9894527034928,32.5541726928209,24.7117531556577,24.3931692905992,23.549536452413,17.4903017173284,20.5996209278295,29.5606078891577,12.2980113367087,16.848732334361,19.1168213125295,104.836952515004,43.5955558807363,39.5095316096509,41.2040633718406,47.1257635997736,60.6906914445851,27.8350081467885,62.77589826904,49.4417093768075,56.7627257504164,48.4848017026056,41.0619401685329,57.9229508385142,51.5390375470357,19.7973910129357,19.3284008402187,18.6141144726411,22.6566093090075,28.5997455390064,14.8583000531826,44.3240168427752,57.6357178721103,40.2682981864809,51.4430227150849,51.1789312176085,33.5644011166882,40.1270335750676,60.2111048864536,52.2976406149464,60.91915152317,29.0037108318586,36.4930610744886,49.0564735671821,32.3543510704364,55.0896524559597,47.4181557188464,46.4775801336172,40.6527444544793,42.9286584904473,44.6154859997021,47.9988569097667,5.27121669744253,7.75560528296651,58.8726970392421,42.7395878457974,33.4304550794491,39.9875726055921,33.2730480068624,48.5895683611749,47.6575960120961,34.1596786335056,45.6334964571746,59.7525187967551,62.2363304961959,59.3366708301855,72.0461355589873,57.6175924479999,135.203466168101,59.6225746745912,49.6310484743671,60.5267156234794,74.923210134722,75.2709191311812,66.0118791500568,48.1803844161548,49.0108926073954,73.9812593218481,51.0841228631283,79.1254173691382,64.6214566975999,75.454904890705,50.3324980722658,66.5630525718849,43.2220020155325,47.8485606760113,53.9418520606275,54.5364153830946,37.0923238933269,31.7519655169286,70.4739383101273,68.8778678768576,27.3082897436806,53.8964727917035,31.6897864256124,55.0905894741506,25.8227788329137,51.8364867457577,32.8163906517349,71.9830207382781,55.1213053752149,30.1758153639122,51.4843221943242,48.8334505854204,28.9891279744945,37.3662185209443,28.9672641342894,123.193443190891,106.951523035439,115.380585269432,105.319631895616,89.0692603590968,103.28859261846,54.7573363154356,41.1674200443447,51.1099209004178,59.9034627161253,73.6317071302977,53.4746736180094,57.8245486967889,49.1662500962303,57.7940417117744,54.2519815790091,55.2840542528855,49.8875840192608,51.8024667930914,48.8628889321916,56.8379700060979,71.5233046397574,53.0930474617506,74.9744428066264,31.6887587054577,40.2959158837827,31.9026549607958,25.1633966666351,75.2689243883855,41.0047066613476,37.7540981805672,76.4331922151813,49.0581385368759,59.3491933466175,170.3977436773,75.9152393254092,41.8560891873293,58.1970632974886,49.6638776617526,46.1972632835436,63.4290152229957,53.0809084734529,125.642499275525,108.169256423954,18.7124924626422,14.5082644386327,16.943952500915,45.9295786535207,27.2131047682152,30.4816459071131,75.4978346385011,58.7080555798203,37.1881198790255,1.47798971368783,16.1128634244204,13.683655625691,25.7974716616361,9.59442494040488,34.6698502835243,42.4007152369688,51.5756767724207,46.1895604261304,46.5808541946055,33.9387655363627,38.0149155398669,82.4163469938401,87.192013766656,51.7768297895907,65.15294474192,53.6484668777824,60.861798184032,62.4954573974446,41.6029747645464,64.8162583140598,53.9026701688457,62.0763677107512,58.7639553934986,51.5490525121871,76.5613513206115,49.186163828354,49.3994808752139,65.7320054534746,37.0770433783291,38.3474721784129,36.3901687902688,19.4598049025905,16.5744840172602,10.5416969741516,48.1645959538081,98.781264817338,28.5273810081437,37.9327023469057,54.0402728307508,37.0656193906584,12.8897915592556,13.595122453933,19.6221093122161,17.5829959703255,50.5648302202702,40.3433546958627,71.142570775548,61.6459856430403,81.6561602116049,8.23907726341901,11.966458368161,7.0450637284126,48.4631392290603,65.5223382588177,61.8484254035397,53.864453136479,38.3622325913898,63.8694780887435,38.0709598726318,76.1393632311129,95.5111517035136,98.2994177278797,53.1380478828349,46.4610304725092,70.3757277191471,62.0689669156888,72.7464058479014,19.6429624816743,26.7485609015085,22.5195146965268,48.1972838599552,46.6019230629392,66.5258645325297,73.9361267299955,33.4547101767976,80.8301071967252,79.3181333892789,57.3112118954708,57.2639959271243,77.1773945513953,54.1276025247321,51.8480237914331,44.5950457154984,54.5217150642802,46.3679410055237,68.0438701200833,40.9033199418701,75.1380869716914,45.0072636805258,71.3797378586331,66.3489539694686,66.3263430973895,47.1333863079018,51.7670847656724,58.4556898613043,47.4982330017941,68.240030442538,78.5832918377502,48.7969970390835,67.8599911837273,43.0804835694726,47.1588387423562,35.4278019532603,63.161776678583,59.1029352466551,7.23557592931584,7.05875717767231,44.3658716451353,61.338738745845,94.3597344526479,38.228215321305,79.1160176030487,64.9349764375027,47.6640396536823,57.2053016512139,54.6325361470142,83.8135127592698,58.8465717377942,62.783002962987,58.71837987841,50.4875150880886,53.8011934421788,58.0393332703647,69.8011159470421,61.9818432603668,53.2366486601344,28.3300221737977,67.5733976115073,92.9691098594571,27.7034865210963,30.6696398870664,35.4238617202502,40.4552583040937,48.7162475562041,34.655628972433,46.6587130778891,51.3578549716341,50.9370873797149,55.473386431833,78.3047241412682,95.0024553435303,37.2297800073346,47.0969184119538,60.4371457479937,64.5162019879729,65.6215081065473,35.5841167569036,41.2126835049821,49.2872393799608,64.3676535598259,58.247524021877,38.034052832432,56.6474632343141,63.6324443791707,50.8536524791093,42.4551314530516,30.5181928610961,44.7219902958838,71.1893907148026,48.5362116514508,48.698490471049,56.0780531560548,48.1699480330133,52.0583208500707,46.2752983171801,43.8705393321938,48.6022657776719,57.210169165667,53.0164777665442,73.238322536783,70.6868134894865,61.0048194679746,46.9211592875051,52.2676727334348,37.5633765099349,55.1046877019174,47.1720131869352,58.5327802668412,50.3094246453241,16.7457711046616,17.5866557642746,16.5197684280507,14.7703700783829,20.5681136543097,12.3209929126616,16.2009431171434,15.8625035258854,65.1626833877586,69.2985495789618,53.908847515827,27.1272635683549,28.2767657433832,14.7263615731217,22.9573832729504,71.6489943443812,18.3845155327072,16.298865869739,23.0481577594934,24.7101516739844,20.0846517549209,35.7230162362493,22.557102938106,25.3937666702405,27.2999727676289,29.4627572498929,18.311388220684,21.9843420643689,25.500983437602,23.9333435444885,26.3621643904815,26.7681690700795,10.5794346080192,11.0778659052941,34.8887825234018,20.6504620158648,9.86909035614947,26.1996756571508,40.7292738375865,53.5199900915354,16.0478473359569,96.0380176205676,35.3341837411781,31.7752208490923,43.3096589959917,51.6956776838475,54.1577253180474,69.4566319342933,34.279205839166,71.9937641716458,37.25937380295,23.7604167356787,69.7853711556345,34.7713520507326,33.4790670854109,45.7228193862857,83.7573032693086,86.2882061936436,14.3240263663524,40.147866094232,23.948309234694,5.55684950723184,36.8346443516183,39.6119779151105,43.9150355602627,60.6796683328593,20.990399999087,60.1749647610879,69.6415903507258,30.0019307345464,76.5896088928114,83.4278963244344,71.7347348922806,82.4718725933138,46.9442934481335,55.3537653290622,28.9905299002458,48.6548743697388,39.0122857018683,42.9995378421786,152.731725853624,60.091633784078,40.7836370070124,71.2137849043758,139.721726059164,124.763125729583,57.3658123748203,45.6171658416645,37.7382084815673,53.8365123778821,23.5044585850194,21.1923346133283,12.4658761425117,18.2732485099916,14.7046900738305,12.9222621971399,16.5085747470041,20.8206918464296,74.9043129074496,68.7210122350012,81.278016074516,68.5951987982429,38.8152153120617,30.6063173181554,40.3279895656193,42.6990425300096,27.1840665682306,25.3745337298257,39.4296627936961,48.9572364852261,36.7795179788782,35.3962291078392,66.9172996747747,92.2565442229553,40.2476090906378,41.1368434565457,72.5392445064262,27.4861621383923,64.7893937676463,50.1850846362676,47.8550788349173,151.263323835103,90.7266134196881,46.5942476114539,84.5290351708484,50.4775809767825,39.2245008637396,44.5865408235418,61.3767406391838,40.1871336956669,57.2713488130483,49.5392416200116,60.9564904498788,50.8294679159365,30.4545511773637,96.4639464738098,56.7211659359136,41.9348289419058,87.4344291493155,39.4426258805124,59.8387231168497,57.3937153000981,34.3659321530358,71.5318402304026,75.9356498402139,79.2593245468136,52.6796643436231,170.416826019981,49.5767616906076,30.8759185348002,37.6454650823911,40.79511006181,82.720554503057,93.9089417179936,43.8306810758146,44.7680588976817,11.4971929260275,41.2574823763159,41.799089330411,42.1716425921104,36.8948282658811,50.251111720377,54.9117251372226,52.3655778726616,45.9733202330257,44.4082753137261,37.1108880048676,38.4436633440598,70.5109481649652,69.7238161904668,68.4145970119977,95.3762295877916,24.3012463028801,46.9185516987489,48.3522091696093,92.9153198127811,107.968457728829,107.18360721153,22.49738915515,21.6664547276226,39.1834640444259,37.2332503235185,29.4733345299001,51.4054963722981,84.9026705616028,74.9421078411291,78.6852309009726,47.1698915406422,47.6706218663111,40.68296602476,67.3319506174604,60.4955043840887,59.1123121798031,56.2731900343691,20.8515002703321,53.6722268624078,40.2257924896446,31.5087302407877,34.4517911171775,45.6368835956273,44.5623867872865,61.4201748004743,14.8011154686501,31.6090741200376,64.1393564806637,43.0808617561083,28.7776292650932,13.6352026009582,18.756060150658,62.5574432614778,58.7539227639032,62.9231633996977,56.3675861244769,52.4596209135687,51.6707976663271,53.1640907980192,52.83737270255,50.5771360054259,38.4184161112348,45.2590530270357,33.4699611854057,78.0286301040342,37.9940440204804,37.7606302678703,45.1035227001048,51.7584803335978,49.6435000155295,43.6212296118584,54.9257674623696,93.719037248737,58.2546154577744,71.2155299834335,74.7156668205148,60.5071630685644,80.0940239389233,72.742074330118,50.8279645905692,45.3915310468176,55.9131652744595,65.6712543758863,48.5973055022692,48.1059201095392,69.1188457850787,55.3049765520438,57.3984066369374,34.6532743073604,36.6183659884195,65.2836686537188,57.3572374606888,48.2595110273633,43.3924518681491,56.4039148175047,64.2149968691823,75.0951359948,16.4040367697246,105.74828689361,53.8248394351063,87.1720935163807,67.3316598771449,53.2501690944818,141.457815204738,37.2504789449494,82.4499863919796,55.0402964442555,71.382414962136,67.7128274330911,71.6315948369028,59.4480323124036,68.0497773210461,95.7158861958754,46.8696098554367,17.3425674867056,19.1325370051243,16.0294086370727,201.80766688939,37.3574821305653,69.5216885849883,13.7991303139902,17.390751940145,18.0825728643856,18.1605105141387,55.4158910258041,74.5557776144639,70.9168076437589,87.7355387143051,56.2845515490679,62.4345789167909,112.704346614158,43.9607252580925,75.2515217159957,67.7928630496742,47.4848180277257,38.1605220784102,42.8219275356806,32.0228299314188,69.4771609070647,56.0429223556356,41.3636209621199,38.2580756079079,50.7635671801741,47.7921128680959,66.0427844100901,47.4418751904535,43.1139973837042,37.1200492673801,53.686802020061,74.5568651557719,58.3302943298939,45.1705354647822,53.3934933654034,13.1168385951419,55.0997935262081,51.0678129491457,33.6847464734878,78.9329151345423,86.9530225678322,82.8685902601089,37.5554458991295,35.4572319246572,49.9889983112862,61.5926653573528,40.0787920425491,65.6369770821863,56.4705499862898,52.1021737308759,101.301836751141,69.6305230635794,66.4270276489076,65.2390421104518,48.5572483389305,50.0856820972855,28.1186513415565,24.3143713742694,58.4774112181597,35.7520795458135,43.7388944192946,43.4953334453003,66.4051469295653,48.0377728245146,64.4173918655608,22.7020452284169,38.3526662613988,49.8792735715015,154.313795187517,45.3876055521768,59.2551043997725,48.1239501024039,56.8516550429435,24.8530523066378,64.2370108905414,68.9702647459558,29.7241654580059,44.7436453173089,91.3523045639964,98.1658422825497,51.6532201232933,61.8588545068935,73.8291197881081,56.3767973996686,68.0081025330577,59.9697927389135,40.9644227940425,35.6085860453342,77.9210704038915,42.9131339595134,45.6568333475591,47.2557716193453,48.3450383642125,85.1467849967391,70.0265708641552,41.4475748130268,54.7995122147025,23.3837699067072,46.7717459478469,62.081883119721,47.0684777767499,57.7407540398984,48.2918829102765,43.6658208480816,48.605408672091,34.325277166939,23.5899634129432,32.8090649785508,22.3868189271841,62.6724324505858,44.8176487078929,87.0618828577475,27.0224463651211,56.8824311421631,42.2851770296781,25.0856783887164,42.0867324281762,60.6527459573125,49.7285230084476,69.5630683971825,72.0993980665013,64.8939843185684,89.451995208071,126.311001190032,50.2993049015405,45.1810515756979,117.041223506315,80.8675115906635,66.9389129910641,47.6648011792726,63.2395347168581,41.458471972939,46.6482811337147,51.6026236200374,53.3264326478778,15.1138049016254,16.7601728598816,86.5657979122336,70.2664627390941,65.0817348445466,49.4217017726102,66.0510271094592,23.842626767164,31.7729369889556,42.2478652813437,93.9393719770646,83.5675118222512,11.5843369372164,59.4642837945605,46.9281884806909,54.3974426613756,45.9792681496784,51.92902838647,38.242020782295,25.0043423996522 | |||
|short_description=p1@BOD1 | |||
}} |
Revision as of 09:09, 22 January 2014
Short description: | p1@BOD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BOD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000311086, ENST00000471339, ENST00000480951, NM_001159651, NM_138369, uc003mcq.2, uc003mcr.2_5end |
EntrezGene: | BOD1 |
HGNC: | 25114 |
UniProt: | Q96IK1C9JNZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.47e-19 | 253 |
embryonic cell | 1.02e-14 | 250 |
Ontology term | p-value | n |
---|---|---|
trunk | 9.21e-12 | 199 |
cell layer | 9.54e-09 | 309 |
epithelium | 3.40e-08 | 306 |
mesenchyme | 1.96e-07 | 160 |
entire embryonic mesenchyme | 1.96e-07 | 160 |
endoderm-derived structure | 6.45e-07 | 160 |
endoderm | 6.45e-07 | 160 |
presumptive endoderm | 6.45e-07 | 160 |
trunk region element | 9.80e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.70e-18 | 143 |
carcinoma | 2.50e-16 | 106 |