FFCP PHASE1:Hg19::chr6:45295979..45295986,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=860 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10472 | |||
|TSSclassifier=strong | |||
|UniProt=Q13950 | |||
|association_with_transcript=-67bp_to_NM_001015051,NM_001024630,uc011dvx.1,uc011dvy.1_5end | |||
|description=CAGE_peak_28_at_RUNX2_5end | |||
|id=chr6:45295979..45295986,+ | |||
|ontology_enrichment_celltype=CL:0000243!2.73e-13!15;CL:0000125!2.73e-13!15;CL:0000030!2.73e-13!15;CL:0000339!2.73e-13!15;CL:0000095!1.96e-11!17;CL:0000123!1.96e-11!17;CL:0000128!4.06e-10!7;CL:0000126!4.06e-10!7;CL:0000127!4.06e-10!7;CL:0002453!4.06e-10!7;CL:0000055!2.34e-08!180;CL:0002319!4.74e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000128;4.55e-22;7!CL:0000126;4.55e-22;7!CL:0000127;4.55e-22;7!CL:0000243;6.29e-14;15!CL:0000125;6.29e-14;15!CL:0002603;7.17e-14;3!CL:0000346;1.40e-13;3!CL:1000428;1.40e-13;3!CL:0000095;1.88e-12;17!CL:0000062;3.52e-10;9!CL:0002319;1.01e-08;25!CL:0002559;1.66e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.72e-22,7;CL:0000126,2.72e-22,7;CL:0000127,2.72e-22,7;CL:0002453,2.72e-22,7;CL:0000243,4.73e-14,15;CL:0000125,4.73e-14,15;CL:0000030,4.73e-14,15;CL:0000339,4.73e-14,15;CL:0002603,9.00e-14,3;CL:0000346,1.24e-13,3;CL:1000428,1.24e-13,3;CL:0000095,1.46e-12,17;CL:0000123,1.46e-12,17;CL:0000333,3.30e-10,41;CL:0000133,4.50e-09,59;CL:0002319,8.48e-09,25;CL:0002559,1.54e-08,5;CL:0000062,2.05e-08,11;CL:0000375,2.05e-08,11;CL:0000335,2.05e-08,11;CL:0000221,2.64e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000339;6.29e-14;15!CL:0000335;2.02e-08;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;2.93e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,2.53e-11,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.40e-13;3!UBERON:0001992;1.40e-13;3!UBERON:0001282;8.20e-11;1!UBERON:0009842;8.20e-11;1!UBERON:0003704;8.20e-11;1!UBERON:0001171;8.20e-11;1!UBERON:0001172;8.20e-11;1!UBERON:0001474;1.02e-08;18!UBERON:0002073;1.66e-08;5!UBERON:0002037;2.26e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.24e-13,3;UBERON:0001992,1.24e-13,3;UBERON:0001282,1.61e-10,1;UBERON:0009842,1.61e-10,1;UBERON:0003704,1.61e-10,1;UBERON:0001171,1.61e-10,1;UBERON:0001172,1.61e-10,1;UBERON:0002073,1.54e-08,5;UBERON:0005086,1.54e-08,5;UBERON:0002037,2.53e-07,6;UBERON:0006215,2.53e-07,6 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,2.01697543935533,0.602694528023977,0,0,1.23121058076788,0.204000691244253,2.5076377718247,1.71741592278634,0.684372125364421,0.376627918784408,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,1.04535523804977,0,0,0,0,0,1.30216690771284,0.950452044448374,0.602300476311091,0.255973222308837,0,0.710331756132051,0,0,0,0.579297615531196,0,0,0,0,0,0.144846518960824,0,0,1.60709189178915,0.443458794925128,0.351339142772504,0.196468613246569,0,0,0,0,0,0,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0.560677600142307,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0.494533858557114,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.507095264676,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0.771622122786426,0,0.532844358032199,0.142977993658148,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0.710246901252508,0.410635780069046,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,1.55668090191184,2.55779449753823,0,0,0,0,0.308097234229289,0.460511024178389,0,0.859361958946189,0.145016693914229,0.255679882248303,0.534192213880424,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.54907405947211,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,1.90506224451495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,1.63629892003448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.153900517007594,1.02547850262301,0,0,0,0,0,0,0,0.784901281975124,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.64127056201227,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.418411385249333,0.407992870545287,1.44475294950759,0,0.136905378891993,0,0,0.262887354279314,0,0.229160424011684,0,0,0.429226048136571,0,0.335917362433631,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0.378806010550178,1.0062716070103,0.889811221596536,0,0,0.932623203496683,0.147855149989634,0,1.34940933649081,0.776314784381297,0,0.265841714557995,0,0.601030435988874,0,0,0,0.107410557042488,0.928067519756987,0,0,0.686791410365586,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0.19998739585493,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,1.19349733269765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.576169937778896,2.91529616043611,0,0,0,0,0,0.157115589916002,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.236664001461131,0.681707238073262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0.891139200981258,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0.924351257262837,0,0,0,0.126698501011437,0,0,0,0,0.530450887527676,0.803892390468535,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0.143444410785353,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p28@RUNX2 | |||
}} |
Revision as of 12:08, 22 January 2014
Short description: | p28@RUNX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_RUNX2_5end |
Coexpression cluster: | NA |
Association with transcript: | -67bp_to_NM_001015051, NM_001024630, uc011dvx.1, uc011dvy.1_5end |
EntrezGene: | RUNX2 |
HGNC: | 10472 |
UniProt: | Q13950 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.72e-22 | 7 |
macroglial cell | 2.72e-22 | 7 |
astrocyte | 2.72e-22 | 7 |
oligodendrocyte precursor cell | 2.72e-22 | 7 |
glial cell (sensu Vertebrata) | 4.73e-14 | 15 |
glial cell | 4.73e-14 | 15 |
glioblast | 4.73e-14 | 15 |
glioblast (sensu Vertebrata) | 4.73e-14 | 15 |
astrocyte of the cerebellum | 9.00e-14 | 3 |
hair follicle dermal papilla cell | 1.24e-13 | 3 |
stem cell of epidermis | 1.24e-13 | 3 |
neuron associated cell | 1.46e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 1.46e-12 | 17 |
migratory neural crest cell | 3.30e-10 | 41 |
neurectodermal cell | 4.50e-09 | 59 |
neural cell | 8.48e-09 | 25 |
hair follicle cell | 1.54e-08 | 5 |
osteoblast | 2.05e-08 | 11 |
osteoprogenitor cell | 2.05e-08 | 11 |
mesenchyme condensation cell | 2.05e-08 | 11 |
ectodermal cell | 2.64e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.24e-13 | 3 |
papillary layer of dermis | 1.24e-13 | 3 |
intralobular bile duct | 1.61e-10 | 1 |
acinus | 1.61e-10 | 1 |
intrahepatic bile duct | 1.61e-10 | 1 |
portal lobule | 1.61e-10 | 1 |
hepatic acinus | 1.61e-10 | 1 |
hair follicle | 1.54e-08 | 5 |
hair follicle placode | 1.54e-08 | 5 |
cerebellum | 2.53e-07 | 6 |
rhombic lip | 2.53e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 2.53e-11 | 1 |