FFCP PHASE1:Hg19::chr6:83073422..83073436,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7162 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12004 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=59bp_to_uc010kbj.2_5end | |||
|coexpression_cluster_id=C2844 | |||
|description=CAGE_peak_10_at_TPBG_5end | |||
|id=chr6:83073422..83073436,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.31e-17!180;CL:0000057!5.52e-11!75;CL:0000187!3.96e-10!54;CL:0000393!1.20e-09!60;CL:0000211!1.20e-09!60;CL:0000680!1.21e-09!57;CL:0000056!1.21e-09!57;CL:0000355!1.21e-09!57;CL:0000183!2.38e-09!59;CL:0000192!2.03e-08!42;CL:0000514!2.03e-08!42;CL:0002321!2.20e-08!248;CL:0000359!5.25e-08!32;CL:0000220!7.37e-08!246;CL:0002334!5.71e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.02e-09;12!CL:0002322;2.79e-08;5!CL:0002582;4.02e-08;3!CL:0002539;6.51e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.38e-09,12;CL:0002322,2.71e-08,5;CL:0002582,2.89e-08,3;CL:0002539,5.79e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.16e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.28e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.41e-14,14 | |||
|ontology_enrichment_uberon=UBERON:0000486!1.52e-10!82;UBERON:0003102!1.96e-10!95;UBERON:0000475!4.32e-10!365;UBERON:0000914!5.12e-10!83;UBERON:0002329!5.12e-10!83;UBERON:0003077!5.12e-10!83;UBERON:0003059!5.12e-10!83;UBERON:0007282!5.12e-10!83;UBERON:0009618!5.12e-10!83;UBERON:0007285!5.12e-10!83;UBERON:0004290!2.58e-09!70;UBERON:0002100!6.55e-09!216;UBERON:0004573!3.47e-08!33;UBERON:0004571!3.47e-08!33;UBERON:0001134!3.49e-08!61;UBERON:0002036!3.49e-08!61;UBERON:0003082!3.49e-08!61;UBERON:0002385!4.57e-08!63;UBERON:0001015!4.57e-08!63;UBERON:0000383!4.57e-08!63;UBERON:0001637!2.75e-07!42;UBERON:0003509!2.75e-07!42;UBERON:0004572!2.75e-07!42;UBERON:0005256!4.64e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;3.03e-13;5!UBERON:0000992;2.75e-09;13!UBERON:0004573;3.64e-08;33!UBERON:0004571;3.64e-08;33!UBERON:0000991;5.57e-07;21!UBERON:0004237;6.51e-07;10!UBERON:0004695;6.51e-07;10!UBERON:0002111;6.51e-07;10!UBERON:0004178;6.51e-07;10!UBERON:0000947;8.02e-07;21!UBERON:0010191;8.02e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,1.36e-13,5;UBERON:0000992,1.82e-09,13;UBERON:0004573,6.63e-09,33;UBERON:0004571,6.63e-09,33;UBERON:0001637,1.13e-07,42;UBERON:0003509,1.13e-07,42;UBERON:0004572,1.13e-07,42;UBERON:0000991,4.20e-07,21;UBERON:0009196,4.20e-07,21;UBERON:0009117,4.20e-07,21;UBERON:0005564,4.20e-07,21;UBERON:0004237,5.79e-07,10;UBERON:0004695,5.79e-07,10;UBERON:0002111,5.79e-07,10;UBERON:0004178,5.79e-07,10;UBERON:0000947,7.28e-07,21;UBERON:0010191,7.28e-07,21 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,1.26343974685366,0,0.737201809504527,0,0.218441372130172,0.263766978228454,0,0,0.672325146451775,0,0.730310090387373,0,0.492484232307152,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,1.50602959389125,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,1.45718115317017,0.741568885568859,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0.872188104285069,0.993943903390637,0.12663051166458,1.58891016975863,1.14734648299525,1.41867352879343,0,2.1349799145941,0.74000264525148,0,0.134710672069688,0,0,0.576175924479999,0.234321431833797,2.80944069147288,1.1409436430889,0.747243402759005,0.822041490506354,0.323745888736263,0.140450806702248,0.816616685019573,0.368502951935304,0.413303124703062,0,0,0,0,0.505008341862199,0.250237039743928,1.6623846929051,0,0,0,0.113432183160021,0.358779271377724,0,0.211931901159562,2.70081986475962,0.515262646192195,0.257640540045629,0.18611685633159,0.337552664482532,0.194874010322397,0.252433774244115,0.368199594569197,0,0.355009592516614,0.10075209822764,0.169560592310488,0.773043412653187,0.545492241181669,0.286804595389004,1.34171076742555,0.530119073285941,1.16193942869518,4.97573064073778,1.51392510525377,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.878002283269004,0,1.00528972411631,0.0925884451585296,0.651616610620649,1.03993478527958,0,0.115930404975077,0,0,0,0,3.1608175918371,0.858486162094873,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0.806026704325635,1.74380363108377,1.15014803749563,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0,0.129271715757778,0,0,0.531876233169741,1.04007436911366,0,0,0,0.428933980974443,0,0,1.30294473717494,0.355391948742546,1.58390374586686,0.602878754119172,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.415941723061614,0.535286966391485,0.157702415033935,1.99140405487612,0,0,0,1.32845119707087,0.368738337083406,0.695068915744663,0.195801157462741,0,0,0,0,0.303127571446259,0,0.30239029332968,0.496215615637554,0.153461973288062,0,0.512556597022804,0.511707249066704,2.89537058058494,1.48418066444991,2.7757744884478,1.24293207719189,1.88892458831761,2.59627214591811,1.16210378459959,0,0.601519410909855,1.84161977871793,0.574072240823034,0.546273504020151,0.262248829918848,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0.574265537996172,0,4.82051789532479,1.06337790121334,0.308097234229289,0.307007349452259,0.964856007391714,0,0.145016693914229,1.53407929348982,0.178064071293475,2.80984356113663,0.576570202095319,1.65896526242959,3.94515345336645,10.6914476338376,65.1661557939425,6.970372701606,1.54016790088044,0,6.95946393660058,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0.42793898803392,4.77304871888905,2.35484592059769,0,0,0.471249609382746,0.606547444719948,0,0.421258456238981,0,0.487426979262569,2.11300293513511,0.9554993798559,0.282810863907425,2.26016233240486,1.10273068709225,0.66343897524122,0.438450885253763,1.15755106853338,0,0.202910376962704,0,0.845086807596724,0.286822704408103,0.0982490410131212,0,0.709522128141196,0,0,0.379473173765715,0.699869440489966,1.05844323998063,0.670302275535787,3.26672954583968,0,1.72202149068492,0,2.66058092122005,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,3.33926115068718,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0.269605053441981,0.358042349351218,0,0.197286811273867,0,0,0,0.0927680981618513,0,2.08342208868187,0,0,0.568967241427498,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0.153900517007594,0.569710279235006,0,0.0897576444097721,0,0,0.549585560411174,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.300646838828985,0.207376382794494,0,0.330991955875499,0.627865836814451,0,0,0,0,0.0979923974143777,0.34823682632161,0,0,0.19351266257817,0.146178634172371,0.0821154570532092,1.26085721434945,0,0,0.274083849293502,0,0.0633107959558787,0,0.320635281006135,0,0.19980960958213,0,0.80175617316141,1.02956998717179,0.864328787928898,0.248505071130865,0,0,0,0,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0.321506296930038,0.137539436597234,0.415440338029185,0,0.77380195455795,0.121499113316049,0.335434687599266,0,0.157363764404994,0.528001682597033,0,1.34340638123612,0,0,0,0,0,0.979762080328227,0,0.164185041498678,0,0.453248366080503,0,0,0.129282956361551,0,0,0,0,0,0,0,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| |||
|short_description=p10@TPBG | |||
}} |
Revision as of 12:50, 22 January 2014
Short description: | p10@TPBG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TPBG_5end |
Coexpression cluster: | C2844_Smooth_mesenchymal_Fibroblast_Preadipocyte_H9_Mesenchymal_Small |
Association with transcript: | 59bp_to_uc010kbj.2_5end |
EntrezGene: | TPBG |
HGNC: | 12004 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.38e-09 | 12 |
embryonic stem cell | 2.71e-08 | 5 |
visceral preadipocyte | 2.89e-08 | 3 |
aortic smooth muscle cell | 5.79e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
right ovary | 1.36e-13 | 5 |
female gonad | 1.82e-09 | 13 |
systemic artery | 6.63e-09 | 33 |
systemic arterial system | 6.63e-09 | 33 |
artery | 1.13e-07 | 42 |
arterial blood vessel | 1.13e-07 | 42 |
arterial system | 1.13e-07 | 42 |
gonad | 4.20e-07 | 21 |
indifferent external genitalia | 4.20e-07 | 21 |
indifferent gonad | 4.20e-07 | 21 |
gonad primordium | 4.20e-07 | 21 |
blood vessel smooth muscle | 5.79e-07 | 10 |
arterial system smooth muscle | 5.79e-07 | 10 |
artery smooth muscle tissue | 5.79e-07 | 10 |
aorta smooth muscle tissue | 5.79e-07 | 10 |
aorta | 7.28e-07 | 21 |
aortic system | 7.28e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.41e-14 | 14 |