FFCP PHASE1:Hg19::chr7:5567947..5567983,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=132 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-218bp_to_ENST00000464611_5end | |||
|coexpression_cluster_id=C1999 | |||
|description=CAGE_peak_10_at_ACTB_5end | |||
|id=chr7:5567947..5567983,- | |||
|ontology_enrichment_celltype=CL:0002371!2.64e-11!591;CL:0000548!3.16e-11!679;CL:0000004!3.16e-11!679;CL:0000255!3.16e-11!679;CL:0000144!5.84e-11!625;CL:0000012!2.24e-10!682;CL:0002009!2.83e-07!65;CL:0002194!4.42e-07!63;CL:0000576!4.42e-07!63;CL:0000040!4.42e-07!63;CL:0000559!4.42e-07!63;CL:0000766!5.21e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.72e-07;39!CL:0000234;3.72e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.32e-08,48;CL:0000234,2.32e-08,48;CL:0002009,4.57e-08,61;CL:0002194,7.14e-08,59;CL:0000576,7.14e-08,59;CL:0000040,7.14e-08,59;CL:0000559,7.14e-08,59;CL:0000766,9.58e-08,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.95e-09!167;UBERON:0003081!1.53e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.77e-09,315;UBERON:0004120,2.77e-09,315;UBERON:0006603,2.77e-09,315;UBERON:0002204,1.56e-08,167;UBERON:0003081,1.75e-08,203 | |||
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| |||
|short_description=p10@ACTB | |||
}} |
Revision as of 15:33, 22 January 2014
Short description: | p10@ACTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ACTB_5end |
Coexpression cluster: | C1999_Neutrophils_Alveolar_Olfactory_Smooth_Monocytederived_Renal_Dendritic |
Association with transcript: | -218bp_to_ENST00000464611_5end |
EntrezGene: | ACTB |
HGNC: | 132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.32e-08 | 48 |
phagocyte | 2.32e-08 | 48 |
macrophage dendritic cell progenitor | 4.57e-08 | 61 |
monopoietic cell | 7.14e-08 | 59 |
monocyte | 7.14e-08 | 59 |
monoblast | 7.14e-08 | 59 |
promonocyte | 7.14e-08 | 59 |
myeloid leukocyte | 9.58e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.77e-09 | 315 |
mesoderm-derived structure | 2.77e-09 | 315 |
presumptive mesoderm | 2.77e-09 | 315 |
musculoskeletal system | 1.56e-08 | 167 |
lateral plate mesoderm | 1.75e-08 | 203 |