FFCP PHASE1:Hg19::chr7:14028488..14028516,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2115 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3490 | |||
|TSSclassifier=strong | |||
|UniProt=B5MCT2 | |||
|association_with_transcript=0bp_to_ENST00000405358_5end | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_2_at_ETV1_5end | |||
|id=chr7:14028488..14028516,- | |||
|ontology_enrichment_celltype=CL:0000055!1.52e-12!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.21e-19!129;UBERON:0007811!1.21e-19!129;UBERON:0004121!5.58e-19!169;UBERON:0000033!8.80e-19!123;UBERON:0001017!3.21e-18!82;UBERON:0005743!1.57e-17!86;UBERON:0000924!1.72e-17!173;UBERON:0006601!1.72e-17!173;UBERON:0000073!3.42e-17!94;UBERON:0001016!3.42e-17!94;UBERON:0001049!4.91e-17!57;UBERON:0005068!4.91e-17!57;UBERON:0006241!4.91e-17!57;UBERON:0007135!4.91e-17!57;UBERON:0000481!7.23e-17!347;UBERON:0002616!1.75e-16!59;UBERON:0000475!2.15e-16!365;UBERON:0003075!3.63e-16!86;UBERON:0007284!3.63e-16!86;UBERON:0002346!3.41e-14!90;UBERON:0000955!4.99e-14!69;UBERON:0006238!4.99e-14!69;UBERON:0003056!9.11e-14!61;UBERON:0003080!4.60e-13!42;UBERON:0007023!8.57e-13!115;UBERON:0002780!9.80e-13!41;UBERON:0001890!9.80e-13!41;UBERON:0006240!9.80e-13!41;UBERON:0000119!1.28e-12!312;UBERON:0000483!2.59e-12!309;UBERON:0000477!7.73e-12!286;UBERON:0001893!5.03e-11!34;UBERON:0001869!8.83e-11!32;UBERON:0002020!1.27e-10!34;UBERON:0003528!1.27e-10!34;UBERON:0002791!1.46e-10!33;UBERON:0004111!8.72e-10!241;UBERON:0002619!5.43e-09!22;UBERON:0001950!1.17e-08!20;UBERON:0000956!1.31e-08!25;UBERON:0000203!1.31e-08!25;UBERON:0000025!4.42e-08!194;UBERON:0000468!1.50e-07!659;UBERON:0000922!3.31e-07!612;UBERON:0000914!9.93e-07!83;UBERON:0002329!9.93e-07!83;UBERON:0003077!9.93e-07!83;UBERON:0003059!9.93e-07!83;UBERON:0007282!9.93e-07!83;UBERON:0009618!9.93e-07!83;UBERON:0007285!9.93e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.01e-08;20!UBERON:0002619;2.86e-08;22!UBERON:0000073;8.11e-08;53!UBERON:0002616;8.11e-08;53!UBERON:0001869;1.16e-07;32!UBERON:0002791;3.04e-07;32!UBERON:0001893;3.10e-07;34!UBERON:0002780;3.81e-07;41!UBERON:0001890;3.81e-07;41!UBERON:0000956;9.01e-07;25!UBERON:0000203;9.01e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.52e-15,171;UBERON:0000924,2.52e-15,171;UBERON:0006601,2.52e-15,171;UBERON:0001017,3.80e-15,81;UBERON:0001016,1.37e-14,89;UBERON:0010314,1.80e-14,132;UBERON:0000073,3.56e-12,53;UBERON:0002616,3.56e-12,53;UBERON:0003075,4.71e-12,82;UBERON:0007284,4.71e-12,82;UBERON:0011216,5.04e-12,223;UBERON:0001049,6.46e-12,56;UBERON:0005068,6.46e-12,56;UBERON:0006241,6.46e-12,56;UBERON:0007135,6.46e-12,56;UBERON:0000955,1.35e-11,68;UBERON:0006238,1.35e-11,68;UBERON:0002346,6.95e-11,86;UBERON:0010371,1.22e-09,104;UBERON:0003056,2.83e-09,61;UBERON:0002780,5.19e-09,41;UBERON:0001890,5.19e-09,41;UBERON:0003080,5.19e-09,41;UBERON:0006240,5.19e-09,41;UBERON:0001950,2.47e-08,20;UBERON:0001869,3.60e-08,32;UBERON:0001893,4.07e-08,34;UBERON:0002619,4.27e-08,22;UBERON:0007023,5.00e-08,114;UBERON:0002791,3.40e-07,32;UBERON:0003528,3.69e-07,34;UBERON:0002020,3.69e-07,34 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,1.26343974685366,0,0,0,0,0,0.37129905888014,0,0.672325146451775,0,0.730310090387373,0,0.492484232307152,0.408001382488506,0,0.572471974262113,0.273748850145768,0.125542639594803,1.52826811495903,1.31360943119913,1.73163718890094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0.361439152384566,0,0.144846518960824,1.5905718941022,0,5.0103453096956,4.21285855178871,3.24988707064566,1.89919659471683,0,0,0,0,0,0,0,0,0.596287222100115,1.72046919021225,0.347140501607594,0,0,0.825354125820202,0,1.03366703667732,2.13459757612026,0,0,0,0.24406205754817,1.10298924103761,0,0.535798369704479,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0,0.709336764396714,0,0,0,1.24484414159907,0.404132016209064,0.490385709340376,2.27036141467397,2.88087962239999,2.81185718200556,1.24864030732128,1.71141546463335,2.69007624993242,2.58355897016283,1.29498355494505,1.12360645361799,6.73708765141148,7.86139630795315,9.40264608699466,1.18800285728205,0.741800787835671,1.82032272387605,0.718618141816238,10.100166837244,3.75355559615892,4.43302584774693,0.877955241761676,0.612975591598039,0.751190294532984,0,0,0.427114777637135,1.48352330811693,1.20036438433761,2.26715564324566,0.257640540045629,0,0.843881661206331,0.0974370051611986,0.504867548488229,0.552299391853796,0,0,0,0.169560592310488,0,0,0,3.41526377162867,3.44577397635862,4.99633954338929,3.10983165046111,4.79409616663694,2.55484151353081,7.8224766164908,1.28648187638577,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,9.43622956641891,0,0,0,0.0925884451585296,0.977424915930974,2.07986957055916,0,3.82570336417754,2.34817388471643,0,0,0,0,0,0,0,0,0,0,0,1.34337784054272,0.290633938513962,0,0,0,0,0,0,0.761974731506028,0.381988425558278,1.17217447210047,3.4214489204541,0.102827492703324,0.600686115687835,0.571652865261156,1.12131084345361,0,3.59357600522655,1.03417372606222,0,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0.532844358032199,0.285955987316295,0,0,1.30294473717494,0.710783897485092,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,21.3955357561078,0.579125226670317,1.43833425785268,0.895304816199478,0.896681151948218,0,0,0,25.6635570464688,3.90419561572865,1.54657762555539,1.34013012267479,0.637938751653163,0,0,0,0.24538298343828,1.00034104211935,1.62759014219841,0,0.178428988797162,0.157702415033935,0,1.50473049863859,4.5481500811197,5.17365356462525,0.664225598535437,0.553107505625109,7.64575807319129,0.587403472388222,0.343143423810856,0,0,0,0,1.66435439510497,0,0.992431231275107,0.61384789315225,0.280660094433074,0.128139149255701,0,0.160853921143607,0,3.39261326365842,1.59805552781814,6.24166385704949,5.19254429183621,3.60252173225874,0.120859449591622,0,0,0.68888668898764,0.728364672026868,0.393373244878272,0.451199612907412,0.0770153371044148,0,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,5.46117361732928,0,0,0,0.650060246036521,0,3.57681657680851,0.616194468458578,0.460511024178389,0.413509717453592,0.751941714077915,0.145016693914229,0.596586391912706,0.623224249527161,0,0,0,0,0.464845549297286,1.5740617341532,2.0911118104818,4.92853728281742,0,0.869932992075073,0.74129687641568,0.143124886741991,3.72158369359667,0,0,0.511795582622668,0.42793898803392,1.59101623962968,0,1.2591072030832,0.274537029736055,0.353437207037059,0.404364963146632,1.58510321173008,0,0.48763373908959,0.731140468893853,0,1.36499911407986,0.565621727814851,2.26016233240486,0.551365343546124,0,0,1.15755106853338,7.21484227251296,0.405820753925408,0.30982349809975,0.845086807596724,0.286822704408103,0.0982490410131212,0.7133421029625,3.54761064070598,0,0,0.75894634753143,0.349934720244983,0,0,0,4.80133383961574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0.111443384277478,0.284136146806413,0,0.593929361665277,0,0.994147647766298,3.37606599385231,0.333926115068718,3.62568523298871,0,0.996239941255349,0.276283915531148,5.79445320064835,0.102268682502155,0,0,0.449341755736634,0,0,0.394573622547734,0,0,0,2.22643435588443,1.99613798001194,0,0,1.44999915086959,0,1.01701460117107,0.236387681767936,0,0.291604613383254,1.04174996959975,0.885741385813839,1.32656082487949,54.92942507415,44.3422832324211,27.7814761816335,1.31631238292384,0,0,0.307801034015188,0.797594390929008,0,0,0,0,0.732780747214898,0,0,0.156980256395025,0,1.35357396370308,0.392125068635479,0.839107934879214,0,0.317873157960757,0,0,0,0.216388639742091,0,1.59223616106011,4.27721101453538,0,0,0,1.21322039365219,0.802577647298789,3.98249557733077,0,0.19566461893209,0,0.394584402849391,1.20990716048664,1.22429104652196,0.06318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| |||
|short_description=p2@ETV1 | |||
}} |
Revision as of 15:46, 22 January 2014
Short description: | p2@ETV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ETV1_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | 0bp_to_ENST00000405358_5end |
EntrezGene: | ETV1 |
HGNC: | 3490 |
UniProt: | B5MCT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.52e-15 | 171 |
ectoderm | 2.52e-15 | 171 |
presumptive ectoderm | 2.52e-15 | 171 |
central nervous system | 3.80e-15 | 81 |
nervous system | 1.37e-14 | 89 |
structure with developmental contribution from neural crest | 1.80e-14 | 132 |
regional part of nervous system | 3.56e-12 | 53 |
regional part of brain | 3.56e-12 | 53 |
neural plate | 4.71e-12 | 82 |
presumptive neural plate | 4.71e-12 | 82 |
organ system subdivision | 5.04e-12 | 223 |
neural tube | 6.46e-12 | 56 |
neural rod | 6.46e-12 | 56 |
future spinal cord | 6.46e-12 | 56 |
neural keel | 6.46e-12 | 56 |
brain | 1.35e-11 | 68 |
future brain | 1.35e-11 | 68 |
neurectoderm | 6.95e-11 | 86 |
ecto-epithelium | 1.22e-09 | 104 |
pre-chordal neural plate | 2.83e-09 | 61 |
regional part of forebrain | 5.19e-09 | 41 |
forebrain | 5.19e-09 | 41 |
anterior neural tube | 5.19e-09 | 41 |
future forebrain | 5.19e-09 | 41 |
neocortex | 2.47e-08 | 20 |
cerebral hemisphere | 3.60e-08 | 32 |
telencephalon | 4.07e-08 | 34 |
regional part of cerebral cortex | 4.27e-08 | 22 |
adult organism | 5.00e-08 | 114 |
regional part of telencephalon | 3.40e-07 | 32 |
brain grey matter | 3.69e-07 | 34 |
gray matter | 3.69e-07 | 34 |