FFCP PHASE1:Hg19::chr7:71802278..71802285,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83698 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13248 | |||
|TSSclassifier=strong | |||
|UniProt=A4D1Z1,Q9BXU9 | |||
|association_with_transcript=-70bp_to_NM_001017440,uc003twa.3_5end | |||
|description=CAGE_peak_20_at_CALN1_5end | |||
|id=chr7:71802278..71802285,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.30e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.69e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0010122;6.30e-26;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.86e-43!57;UBERON:0005068!1.86e-43!57;UBERON:0006241!1.86e-43!57;UBERON:0007135!1.86e-43!57;UBERON:0001017!5.08e-42!82;UBERON:0005743!6.81e-40!86;UBERON:0000073!7.09e-39!94;UBERON:0001016!7.09e-39!94;UBERON:0000955!2.42e-38!69;UBERON:0006238!2.42e-38!69;UBERON:0002616!1.06e-37!59;UBERON:0001893!2.57e-37!34;UBERON:0001869!1.52e-34!32;UBERON:0002791!1.44e-33!33;UBERON:0002020!1.74e-32!34;UBERON:0003528!1.74e-32!34;UBERON:0002780!1.36e-30!41;UBERON:0001890!1.36e-30!41;UBERON:0006240!1.36e-30!41;UBERON:0003075!1.69e-30!86;UBERON:0007284!1.69e-30!86;UBERON:0003080!8.21e-30!42;UBERON:0002346!5.80e-29!90;UBERON:0002619!1.53e-25!22;UBERON:0007023!3.13e-24!115;UBERON:0000153!5.33e-23!129;UBERON:0007811!5.33e-23!129;UBERON:0001950!1.20e-22!20;UBERON:0000956!2.13e-22!25;UBERON:0000203!2.13e-22!25;UBERON:0000349!6.98e-21!5;UBERON:0000033!7.17e-20!123;UBERON:0004121!9.23e-20!169;UBERON:0003056!9.54e-20!61;UBERON:0000924!3.38e-19!173;UBERON:0006601!3.38e-19!173;UBERON:0002420!7.92e-18!9;UBERON:0007245!7.92e-18!9;UBERON:0010009!7.92e-18!9;UBERON:0010011!7.92e-18!9;UBERON:0000454!7.92e-18!9;UBERON:0000369!2.47e-15!4;UBERON:0002435!2.47e-15!4;UBERON:0000204!2.47e-15!4;UBERON:0010082!2.47e-15!4;UBERON:0003076!1.31e-14!15;UBERON:0003057!1.31e-14!15;UBERON:0001876!9.83e-14!2;UBERON:0001871!4.88e-13!7;UBERON:0004733!6.70e-13!12;UBERON:0002028!6.70e-13!12;UBERON:0007277!6.70e-13!12;UBERON:0002298!1.27e-12!8;UBERON:0004732!6.81e-12!13;UBERON:0002308!1.25e-11!9;UBERON:0000125!1.25e-11!9;UBERON:0000025!3.82e-11!194;UBERON:0005383!9.96e-10!3;UBERON:0005382!9.96e-10!3;UBERON:0000988!2.99e-09!3;UBERON:0001896!3.26e-09!3;UBERON:0005290!3.26e-09!3;UBERON:0010096!3.26e-09!3;UBERON:0009663!5.72e-09!7;UBERON:0000064!2.25e-08!219;UBERON:0004111!4.02e-08!241;UBERON:0000477!6.68e-08!286;UBERON:0001882!7.76e-08!1;UBERON:0005403!7.76e-08!1;UBERON:0000483!8.12e-08!309;UBERON:0001874!8.84e-08!1;UBERON:0000119!1.08e-07!312;UBERON:0002370!1.53e-07!4;UBERON:0005058!1.53e-07!4;UBERON:0009113!1.53e-07!4;UBERON:0003295!1.53e-07!4;UBERON:0005562!1.53e-07!4;UBERON:0002336!1.58e-07!1;UBERON:0001018!1.58e-07!1;UBERON:0002473!1.58e-07!1;UBERON:0005340!1.58e-07!1;UBERON:0002316!1.58e-07!1;UBERON:0003544!1.58e-07!1;UBERON:0001020!1.58e-07!1;UBERON:0005970!1.58e-07!1;UBERON:0002437!1.58e-07!1;UBERON:0002022!1.80e-07!1;UBERON:0002581!2.17e-07!1;UBERON:0002902!2.98e-07!1;UBERON:0009899!2.98e-07!1;UBERON:0007190!3.17e-07!1;UBERON:0002680!7.58e-07!9;UBERON:0001895!7.58e-07!9;UBERON:0010092!7.58e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.30e-26;2!UBERON:0001873;6.30e-26;2!UBERON:0005058;6.30e-26;2!UBERON:0009113;6.30e-26;2!UBERON:0005383;8.69e-18;3!UBERON:0005382;8.69e-18;3!UBERON:0000369;1.06e-13;4!UBERON:0002435;1.06e-13;4!UBERON:0000204;1.06e-13;4!UBERON:0004177;3.10e-11;5!UBERON:0005057;3.10e-11;5!UBERON:0009663;2.11e-08;7!UBERON:0002420;8.14e-07;9!UBERON:0000125;8.14e-07;9!UBERON:0007245;8.14e-07;9!UBERON:0002308;8.14e-07;9!UBERON:0010009;8.14e-07;9!UBERON:0010011;8.14e-07;9!UBERON:0000454;8.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,5.56e-26,2;UBERON:0010122,5.56e-26,2;UBERON:0005383,8.00e-18,3;UBERON:0005382,8.00e-18,3;UBERON:0000369,1.00e-13,4;UBERON:0002435,1.00e-13,4;UBERON:0000204,1.00e-13,4;UBERON:0010082,1.00e-13,4;UBERON:0002370,1.29e-13,4;UBERON:0005058,1.29e-13,4;UBERON:0009113,1.29e-13,4;UBERON:0003295,1.29e-13,4;UBERON:0005562,1.29e-13,4;UBERON:0003351,1.57e-09,6;UBERON:0009663,2.03e-08,7;UBERON:0004177,2.35e-08,7;UBERON:0005057,2.35e-08,7;UBERON:0002420,7.91e-07,9;UBERON:0000125,7.91e-07,9;UBERON:0007245,7.91e-07,9;UBERON:0002308,7.91e-07,9;UBERON:0010009,7.91e-07,9;UBERON:0010011,7.91e-07,9;UBERON:0000454,7.91e-07,9 | |||
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|short_description=p20@CALN1 | |||
}} |
Revision as of 17:18, 22 January 2014
Short description: | p20@CALN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_CALN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -70bp_to_NM_001017440, uc003twa.3_5end |
EntrezGene: | CALN1 |
HGNC: | 13248 |
UniProt: | A4D1Z1Q9BXU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 5.56e-26 | 2 |
future caudate nucleus | 5.56e-26 | 2 |
caudate-putamen | 8.00e-18 | 3 |
dorsal striatum | 8.00e-18 | 3 |
corpus striatum | 1.00e-13 | 4 |
striatum | 1.00e-13 | 4 |
ventral part of telencephalon | 1.00e-13 | 4 |
future corpus striatum | 1.00e-13 | 4 |
thymus | 1.29e-13 | 4 |
hemolymphoid system gland | 1.29e-13 | 4 |
thymic region | 1.29e-13 | 4 |
pharyngeal gland | 1.29e-13 | 4 |
thymus primordium | 1.29e-13 | 4 |
pharyngeal epithelium | 1.57e-09 | 6 |
telencephalic nucleus | 2.03e-08 | 7 |
hemopoietic organ | 2.35e-08 | 7 |
immune organ | 2.35e-08 | 7 |
basal ganglion | 7.91e-07 | 9 |
neural nucleus | 7.91e-07 | 9 |
nuclear complex of neuraxis | 7.91e-07 | 9 |
nucleus of brain | 7.91e-07 | 9 |
aggregate regional part of brain | 7.91e-07 | 9 |
collection of basal ganglia | 7.91e-07 | 9 |
cerebral subcortex | 7.91e-07 | 9 |