FFCP PHASE1:Hg19::chr7:116963200..116963216,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7472 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12780 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000461427_5end | |||
|coexpression_cluster_id=C4646 | |||
|description=CAGE_peak_3_at_WNT2_5end | |||
|id=chr7:116963200..116963216,- | |||
|ontology_enrichment_celltype=CL:0002537!1.04e-12!5;CL:0002334!3.05e-08!12;CL:0000349!4.28e-08!3;CL:0002577!4.28e-08!3;CL:0002570!1.39e-07!8;CL:0002579!2.60e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.96e-15;5!CL:0002577;8.21e-12;3!CL:0000349;1.14e-10;19!CL:1000306;2.27e-09;4!CL:0002547;2.27e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.58e-15,5;CL:0002577,6.23e-12,3;CL:0000349,1.16e-10,19;CL:1000306,1.92e-09,4;CL:0002547,1.92e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.83e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.74e-16!14;UBERON:0000158!5.74e-16!14;UBERON:0000478!7.21e-15!24;UBERON:0004923!1.64e-11!57;UBERON:0001987!1.77e-10!4;UBERON:0004340!1.77e-10!4;UBERON:0000305!6.25e-09!7;UBERON:0003124!1.15e-08!7;UBERON:0004871!9.48e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.01e-26;24!UBERON:0001987;3.89e-19;4!UBERON:0000305;3.47e-11;7!UBERON:0004797;2.27e-09;4!UBERON:0000415;2.27e-09;4!UBERON:0007240;2.27e-09;4!UBERON:0005742;2.27e-09;4!UBERON:0005734;2.27e-09;4!UBERON:0004664;2.27e-09;4!UBERON:0004663;2.27e-09;4!UBERON:0002331;3.14e-08;10!UBERON:0005631;5.57e-08;10!UBERON:0000158;5.57e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,8.37e-27,24;UBERON:0005631,9.38e-21,14;UBERON:0000158,9.38e-21,14;UBERON:0001987,2.44e-19,4;UBERON:0004340,2.44e-19,4;UBERON:0004923,2.22e-13,66;UBERON:0003124,2.67e-11,7;UBERON:0000305,4.22e-11,7;UBERON:0004871,8.85e-10,8;UBERON:0000415,1.92e-09,4;UBERON:0007240,1.92e-09,4;UBERON:0005742,1.92e-09,4;UBERON:0005734,1.92e-09,4;UBERON:0004664,1.92e-09,4;UBERON:0004663,1.92e-09,4;UBERON:0002331,2.85e-08,10;UBERON:0000358,2.85e-08,10;UBERON:0000307,2.85e-08,10;UBERON:0000091,2.85e-08,10;UBERON:0000087,2.85e-08,10;UBERON:0007010,2.85e-08,10;UBERON:0007806,2.85e-08,10;UBERON:0008780,2.85e-08,10;UBERON:0005728,2.85e-08,10 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,5.73673241497627,1.77334191099179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.600952235626387,0,0,0.213557388818567,0.423863802319124,0,0,0,0,0,0.0974370051611986,0,1.10459878370759,10.1837015795851,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39344304926383,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0.60818530127658,0,0,0,0,0,1.5156378572313,1.66435439510497,0.30239029332968,0.992431231275107,0,0,0.128139149255701,2.04682899626681,0.160853921143607,0,0.154209693802656,0.532685175939381,0.164254312027618,0,0,0,0,0,1.83703117063371,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924100740528266,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,1.31717957183961,0,0,0,0.670302275535787,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0.890894042497916,0.614321404198464,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96521128680622,2.71840665682306,3.44592433368003,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.943225830597996,0.828478110694391,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47764408660622,0.233713309847224,0.554805861502613,0,0,0,0,0.453692771289717,0.466311601748341,0,0,0,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0.398095888698616,0,2.40376993627955,0.673498977531838,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,2.86203915588077,0,0,0,2.1437183414724,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,2.92717821536708,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0355687334467,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0.99798106963804,0,0,0,0,0,0.488965776731466,0,0,0.201273793591026,0.641136984606466 | |||
|short_description=p3@WNT2 | |||
}} |
Revision as of 18:58, 22 January 2014
Short description: | p3@WNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_WNT2_5end |
Coexpression cluster: | C4646_tenocyte_Fibroblast_cord_Mesenchymal_mesenchymal_normal_Prostate |
Association with transcript: | 0bp_to_ENST00000461427_5end |
EntrezGene: | WNT2 |
HGNC: | 12780 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.58e-15 | 5 |
placental epithelial cell | 6.23e-12 | 3 |
extraembryonic cell | 1.16e-10 | 19 |
fibroblast of tunica adventitia of artery | 1.92e-09 | 4 |
fibroblast of the aortic adventitia | 1.92e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 8.37e-27 | 24 |
extraembryonic membrane | 9.38e-21 | 14 |
membranous layer | 9.38e-21 | 14 |
placenta | 2.44e-19 | 4 |
allantois | 2.44e-19 | 4 |
organ component layer | 2.22e-13 | 66 |
chorion | 2.67e-11 | 7 |
amnion | 4.22e-11 | 7 |
somatic layer of lateral plate mesoderm | 8.85e-10 | 8 |
artery wall | 1.92e-09 | 4 |
tunica adventitia of artery | 1.92e-09 | 4 |
adventitia | 1.92e-09 | 4 |
tunica adventitia of blood vessel | 1.92e-09 | 4 |
aorta tunica adventitia | 1.92e-09 | 4 |
aorta wall | 1.92e-09 | 4 |
umbilical cord | 2.85e-08 | 10 |
blastocyst | 2.85e-08 | 10 |
blastula | 2.85e-08 | 10 |
bilaminar disc | 2.85e-08 | 10 |
inner cell mass | 2.85e-08 | 10 |
cleaving embryo | 2.85e-08 | 10 |
connecting stalk | 2.85e-08 | 10 |
inner cell mass derived epiblast | 2.85e-08 | 10 |
extraembryonic mesoderm | 2.85e-08 | 10 |