FFCP PHASE1:Hg19::chr7:117120106..117120117,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1080 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1884 | |||
|TSSclassifier=strong | |||
|UniProt=E7EPB6 | |||
|association_with_transcript=-31bp_to_ENST00000426809_5end | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_5_at_CFTR_5end | |||
|id=chr7:117120106..117120117,+ | |||
|ontology_enrichment_celltype=CL:0002322!9.20e-14!5;CL:0002563!5.80e-11!4;CL:0000080!2.72e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002563;4.20e-12;4!CL:0002253;5.41e-07;2!CL:1000415;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.27e-12,4;CL:0002253,5.41e-07,2;CL:1000415,7.61e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.91e-12;1 | |||
|ontology_enrichment_disease=DOID:3493!4.39e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:299;1.88e-07;25!DOID:3493;4.55e-07;2!DOID:4929;5.11e-07;2!DOID:4468;9.27e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.80e-07,25;DOID:3493,4.56e-07,2;DOID:4929,5.11e-07,2;DOID:4468,8.06e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!1.05e-24!27;UBERON:0001155!1.33e-23!9;UBERON:0005409!1.50e-21!35;UBERON:0000059!3.87e-19!11;UBERON:0004921!4.26e-14!129;UBERON:0004185!4.26e-14!129;UBERON:0001007!2.76e-13!155;UBERON:0001555!2.76e-13!155;UBERON:0007026!2.76e-13!155;UBERON:0004119!8.21e-13!169;UBERON:0000925!8.21e-13!169;UBERON:0006595!8.21e-13!169;UBERON:0001242!5.80e-11!4;UBERON:0001262!5.80e-11!4;UBERON:0004786!5.80e-11!4;UBERON:0004808!5.80e-11!4;UBERON:0001277!5.80e-11!4;UBERON:0003350!7.45e-09!5;UBERON:0002110!3.95e-07!3;UBERON:0006242!3.95e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.10e-21;17!UBERON:0005409;6.55e-17;22!UBERON:0002110;1.65e-15;3!UBERON:0004921;7.85e-14;33!UBERON:0001242;4.20e-12;4!UBERON:0001262;4.20e-12;4!UBERON:0004786;4.20e-12;4!UBERON:0004808;4.20e-12;4!UBERON:0001277;4.20e-12;4!UBERON:0001155;1.17e-11;9!UBERON:0002075;3.55e-10;18!UBERON:0002108;7.77e-10;4!UBERON:0000059;1.23e-09;11!UBERON:0000485;2.73e-07;7!UBERON:0003929;2.73e-07;7!UBERON:0002294;3.67e-07;7!UBERON:0001173;3.67e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.20e-21,17;UBERON:0002110,1.42e-15,3;UBERON:0006242,1.42e-15,3;UBERON:0005409,6.78e-15,25;UBERON:0001242,3.27e-12,4;UBERON:0001262,3.27e-12,4;UBERON:0004786,3.27e-12,4;UBERON:0004808,3.27e-12,4;UBERON:0001277,3.27e-12,4;UBERON:0001155,1.52e-11,9;UBERON:0002075,3.39e-10,18;UBERON:0002108,7.77e-10,4;UBERON:0000059,1.51e-09,11;UBERON:0001007,1.39e-07,145;UBERON:0001555,1.39e-07,145;UBERON:0007026,1.39e-07,145;UBERON:0004119,9.91e-07,160;UBERON:0000925,9.91e-07,160;UBERON:0006595,9.91e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96781501668982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09814811894422,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63232808159148,4.80600442875399,0,0.995261931078505,1.23840590304675,0.611030144933625,2.07564790076435,0.370691816839509,0.522109747527277,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68333522528221,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,1.57204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.81514011233093,0,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60348418641188,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0.196300467230486,23.0424878216489,0,0,0,0,0,0,0,0,0,0,1.46630900405095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,3.1741610430924,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,6.73689015799402,0,0,0,0,0,0 | |||
|short_description=p5@CFTR | |||
}} |
Revision as of 18:58, 22 January 2014
Short description: | p5@CFTR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CFTR_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | -31bp_to_ENST00000426809_5end |
EntrezGene: | CFTR |
HGNC: | 1884 |
UniProt: | E7EPB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.27e-12 | 4 |
epithelial cell of large intestine | 5.41e-07 | 2 |
epithelial cell of gall bladder | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.20e-21 | 17 |
gallbladder | 1.42e-15 | 3 |
gall bladder primordium | 1.42e-15 | 3 |
gastrointestinal system | 6.78e-15 | 25 |
intestinal mucosa | 3.27e-12 | 4 |
wall of intestine | 3.27e-12 | 4 |
gastrointestinal system mucosa | 3.27e-12 | 4 |
gastrointestinal system epithelium | 3.27e-12 | 4 |
intestinal epithelium | 3.27e-12 | 4 |
colon | 1.52e-11 | 9 |
viscus | 3.39e-10 | 18 |
small intestine | 7.77e-10 | 4 |
large intestine | 1.51e-09 | 11 |
digestive system | 1.39e-07 | 145 |
digestive tract | 1.39e-07 | 145 |
primitive gut | 1.39e-07 | 145 |
endoderm-derived structure | 9.91e-07 | 160 |
endoderm | 9.91e-07 | 160 |
presumptive endoderm | 9.91e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.80e-07 | 25 |
signet ring cell adenocarcinoma | 4.56e-07 | 2 |
tubular adenocarcinoma | 5.11e-07 | 2 |
clear cell adenocarcinoma | 8.06e-07 | 2 |