FFCP PHASE1:Hg19::chr7:130600638..130600649,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3294 | |||
|description=CAGE_peak_at_chr7:130600638..130600649,+ | |||
|id=chr7:130600638..130600649,+ | |||
|ontology_enrichment_celltype=CL:0000181!9.40e-09!12;CL:0000417!9.40e-09!12;CL:0000668!9.40e-09!12;CL:0000414!9.40e-09!12;CL:0000412!9.40e-09!12;CL:0000182!9.40e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.29e-38;12!CL:0002567;1.20e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.60e-38,12;CL:0002567,1.20e-10,3;CL:0000223,2.77e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.64e-41;11!UBERON:0009497;4.54e-35;13!UBERON:0001041;1.45e-15;30!UBERON:0003104;6.26e-15;31!UBERON:0007123;4.79e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;2.73e-11;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,4.31e-12,39;DOID:305,5.49e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000341!5.26e-09!2;UBERON:0003127!5.47e-09!2;UBERON:0003929!2.66e-08!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.21e-24;19!UBERON:0006925;3.21e-24;19!UBERON:0002368;9.50e-20;33!UBERON:0002423;1.47e-18;25!UBERON:0002365;2.71e-14;31!UBERON:0002330;2.71e-14;31!UBERON:0000949;1.66e-12;43!UBERON:0002530;3.88e-07;57!UBERON:0002046;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.31e-24,19;UBERON:0006925,3.31e-24,19;UBERON:0008836,3.31e-24,19;UBERON:0008835,5.39e-21,22;UBERON:0003894,5.39e-21,22;UBERON:0002368,1.55e-20,35;UBERON:0009854,4.14e-20,23;UBERON:0007499,1.50e-18,25;UBERON:0009497,1.50e-18,25;UBERON:0000015,1.50e-18,25;UBERON:0002423,1.50e-18,25;UBERON:0006235,1.50e-18,25;UBERON:0004161,1.50e-18,25;UBERON:0009856,7.34e-18,26;UBERON:0000949,4.53e-16,45;UBERON:0002365,4.49e-15,31;UBERON:0002330,4.49e-15,31;UBERON:0003929,1.86e-13,54;UBERON:0002530,2.40e-12,59;UBERON:0005911,5.70e-09,82;UBERON:0005172,7.27e-09,54;UBERON:0005173,7.27e-09,54;UBERON:0002417,5.07e-08,60;UBERON:0000916,5.07e-08,60;UBERON:0002046,4.79e-07,5;UBERON:0004117,4.79e-07,5;UBERON:0007689,4.79e-07,5;UBERON:0007123,4.79e-07,5;UBERON:0003091,4.79e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.309977343527296,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,1.71072446022705,0,0.901029173531752,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49487848582361,2.52106183383116,2.80213918495966,2.76354529802158,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,3.76253837089218,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.23806443146374,0,0,0,0.190941474834495,5.86139847978836,0,0,0,0.143444410785353,0.665320713092027,0,0,0,0,0,0.488965776731466,0,0,0,0 | |||
|short_description=p@chr7:130600638..130600649,+ | |||
}} |
Revision as of 19:19, 22 January 2014
Short description: | p@chr7:130600638..130600649, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:130600638..130600649, + |
Coexpression cluster: | C3294_smallcell_hepatoblastoma_thyroid_hepatocellular_Melanocyte_liver_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.60e-38 | 12 |
light melanocyte | 1.20e-10 | 3 |
endodermal cell | 2.77e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.31e-24 | 19 |
digestive gland | 3.31e-24 | 19 |
liver bud | 3.31e-24 | 19 |
hepatic diverticulum | 5.39e-21 | 22 |
liver primordium | 5.39e-21 | 22 |
endocrine gland | 1.55e-20 | 35 |
digestive tract diverticulum | 4.14e-20 | 23 |
epithelial sac | 1.50e-18 | 25 |
epithelium of foregut-midgut junction | 1.50e-18 | 25 |
anatomical boundary | 1.50e-18 | 25 |
hepatobiliary system | 1.50e-18 | 25 |
foregut-midgut junction | 1.50e-18 | 25 |
septum transversum | 1.50e-18 | 25 |
sac | 7.34e-18 | 26 |
endocrine system | 4.53e-16 | 45 |
exocrine gland | 4.49e-15 | 31 |
exocrine system | 4.49e-15 | 31 |
gut epithelium | 1.86e-13 | 54 |
gland | 2.40e-12 | 59 |
endo-epithelium | 5.70e-09 | 82 |
abdomen element | 7.27e-09 | 54 |
abdominal segment element | 7.27e-09 | 54 |
abdominal segment of trunk | 5.07e-08 | 60 |
abdomen | 5.07e-08 | 60 |
thyroid gland | 4.79e-07 | 5 |
pharyngeal pouch | 4.79e-07 | 5 |
thyroid diverticulum | 4.79e-07 | 5 |
pharyngeal pouch 2 | 4.79e-07 | 5 |
thyroid primordium | 4.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 4.31e-12 | 39 |
carcinoma | 5.49e-07 | 106 |