FFCP PHASE1:Hg19::chr7:148844516..148844577,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57541 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18373 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TD17 | |||
|association_with_transcript=0bp_to_ENST00000420008,ENST00000475153,NM_170686,uc003wfl.2_5end | |||
|description=CAGE_peak_1_at_ZNF398_5end | |||
|id=chr7:148844516..148844577,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.50e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.11e-38!115;UBERON:0001049!4.83e-22!57;UBERON:0005068!4.83e-22!57;UBERON:0006241!4.83e-22!57;UBERON:0007135!4.83e-22!57;UBERON:0001017!5.37e-22!82;UBERON:0005743!3.34e-20!86;UBERON:0003080!3.84e-19!42;UBERON:0000073!4.53e-19!94;UBERON:0001016!4.53e-19!94;UBERON:0002780!1.38e-18!41;UBERON:0001890!1.38e-18!41;UBERON:0006240!1.38e-18!41;UBERON:0002616!2.79e-18!59;UBERON:0000924!1.14e-16!173;UBERON:0006601!1.14e-16!173;UBERON:0000955!2.79e-16!69;UBERON:0006238!2.79e-16!69;UBERON:0004121!4.96e-16!169;UBERON:0001893!1.02e-15!34;UBERON:0002020!2.80e-15!34;UBERON:0003528!2.80e-15!34;UBERON:0002791!3.28e-15!33;UBERON:0001869!6.87e-15!32;UBERON:0002346!5.75e-14!90;UBERON:0003075!2.25e-13!86;UBERON:0007284!2.25e-13!86;UBERON:0002619!3.96e-13!22;UBERON:0001950!3.48e-12!20;UBERON:0000956!1.56e-11!25;UBERON:0000203!1.56e-11!25;UBERON:0000153!2.22e-10!129;UBERON:0007811!2.22e-10!129;UBERON:0003056!3.72e-10!61;UBERON:0000033!1.52e-09!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.16e-13;41!UBERON:0001890;1.16e-13;41!UBERON:0001893;1.92e-13;34!UBERON:0001869;2.23e-13;32!UBERON:0002791;2.83e-13;32!UBERON:0003528;3.61e-13;34!UBERON:0002020;3.61e-13;34!UBERON:0002619;3.77e-13;22!UBERON:0001950;3.24e-12;20!UBERON:0000073;3.99e-12;53!UBERON:0002616;3.99e-12;53!UBERON:0000956;1.73e-11;25!UBERON:0000203;1.73e-11;25!UBERON:0007023;9.06e-11;114!UBERON:0001017;1.78e-08;75!UBERON:0000955;3.11e-08;68!UBERON:0001016;7.99e-08;83!UBERON:0000922;8.26e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.64e-38,114;UBERON:0001049,1.73e-21,56;UBERON:0005068,1.73e-21,56;UBERON:0006241,1.73e-21,56;UBERON:0007135,1.73e-21,56;UBERON:0001017,1.80e-21,81;UBERON:0001016,3.73e-20,89;UBERON:0000073,3.84e-20,53;UBERON:0002616,3.84e-20,53;UBERON:0002780,1.38e-18,41;UBERON:0001890,1.38e-18,41;UBERON:0003080,1.38e-18,41;UBERON:0006240,1.38e-18,41;UBERON:0004121,4.70e-16,171;UBERON:0000924,4.70e-16,171;UBERON:0006601,4.70e-16,171;UBERON:0000955,8.64e-16,68;UBERON:0006238,8.64e-16,68;UBERON:0001893,1.02e-15,34;UBERON:0003528,2.80e-15,34;UBERON:0002020,2.80e-15,34;UBERON:0001869,6.87e-15,32;UBERON:0002791,8.75e-15,32;UBERON:0002346,1.38e-13,86;UBERON:0002619,3.96e-13,22;UBERON:0010371,4.17e-13,104;UBERON:0003075,5.36e-13,82;UBERON:0007284,5.36e-13,82;UBERON:0001950,3.48e-12,20;UBERON:0000956,1.56e-11,25;UBERON:0000203,1.56e-11,25;UBERON:0003056,5.39e-10,61;UBERON:0011216,2.10e-09,223 | |||
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| |||
|short_description=p1@ZNF398 | |||
}} |
Revision as of 19:57, 22 January 2014
Short description: | p1@ZNF398 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF398_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000420008, ENST00000475153, NM_170686, uc003wfl.2_5end |
EntrezGene: | ZNF398 |
HGNC: | 18373 |
UniProt: | Q8TD17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.64e-38 | 114 |
neural tube | 1.73e-21 | 56 |
neural rod | 1.73e-21 | 56 |
future spinal cord | 1.73e-21 | 56 |
neural keel | 1.73e-21 | 56 |
central nervous system | 1.80e-21 | 81 |
nervous system | 3.73e-20 | 89 |
regional part of nervous system | 3.84e-20 | 53 |
regional part of brain | 3.84e-20 | 53 |
regional part of forebrain | 1.38e-18 | 41 |
forebrain | 1.38e-18 | 41 |
anterior neural tube | 1.38e-18 | 41 |
future forebrain | 1.38e-18 | 41 |
ectoderm-derived structure | 4.70e-16 | 171 |
ectoderm | 4.70e-16 | 171 |
presumptive ectoderm | 4.70e-16 | 171 |
brain | 8.64e-16 | 68 |
future brain | 8.64e-16 | 68 |
telencephalon | 1.02e-15 | 34 |
brain grey matter | 2.80e-15 | 34 |
gray matter | 2.80e-15 | 34 |
cerebral hemisphere | 6.87e-15 | 32 |
regional part of telencephalon | 8.75e-15 | 32 |
neurectoderm | 1.38e-13 | 86 |
regional part of cerebral cortex | 3.96e-13 | 22 |
ecto-epithelium | 4.17e-13 | 104 |
neural plate | 5.36e-13 | 82 |
presumptive neural plate | 5.36e-13 | 82 |
neocortex | 3.48e-12 | 20 |
cerebral cortex | 1.56e-11 | 25 |
pallium | 1.56e-11 | 25 |
pre-chordal neural plate | 5.39e-10 | 61 |
organ system subdivision | 2.10e-09 | 223 |