FFCP PHASE1:Hg19::chr7:156803309..156803320,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3110 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4979 | |||
|TSSclassifier=strong | |||
|UniProt=P50219,Q9UDY3 | |||
|association_with_transcript=26bp_to_NM_005515,uc003wna.2,uc003wnd.1_5end | |||
|description=CAGE_peak_3_at_MNX1_5end | |||
|id=chr7:156803309..156803320,- | |||
|ontology_enrichment_celltype=CL:0000066!1.86e-12!254 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.29e-26;2!CL:0000242;1.29e-26;2!CL:0000167;3.98e-14;1!CL:0000164;3.98e-14;1!CL:0000502;3.98e-14;1!CL:0000172;3.98e-14;1!CL:0000173;3.98e-14;1!CL:0000312;3.04e-11;5!CL:0000240;1.61e-09;6!CL:0000311;1.61e-09;6!CL:0000079;1.61e-09;6!CL:0000237;1.61e-09;6!CL:0002535;1.20e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.29e-26,2;CL:0000167,3.98e-14,1;CL:0000164,3.98e-14,1;CL:0000502,3.98e-14,1;CL:0000172,3.98e-14,1;CL:0000173,3.98e-14,1;CL:0002351,3.98e-14,1;CL:0000312,3.04e-11,5;CL:0000240,1.61e-09,6;CL:0000311,1.61e-09,6;CL:0000079,1.61e-09,6;CL:0000237,1.61e-09,6;CL:0000036,1.61e-09,6;CL:0000357,1.61e-09,6;CL:0000114,1.61e-09,6;CL:0000066,6.10e-08,253;CL:0002535,1.20e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002351;3.98e-14;1!CL:0000357;1.61e-09;6!CL:0000114;1.61e-09;6 | |||
|ontology_enrichment_disease=DOID:0050687!2.88e-44!143;DOID:305!2.11e-39!106;DOID:162!3.21e-33!235;DOID:14566!4.33e-32!239;DOID:0050686!2.87e-12!137;DOID:5093!9.64e-10!4;DOID:1612!9.64e-10!4;DOID:299!3.12e-09!25;DOID:7!4.81e-09!39;DOID:3119!1.07e-08!14;DOID:0050615!1.91e-08!16;DOID:1324!2.45e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.36e-28;4!DOID:1612;1.36e-28;4!DOID:4430;3.98e-14;1!DOID:1799;1.25e-13;1!DOID:10165;1.25e-13;1!DOID:1798;1.25e-13;1!DOID:305;1.40e-10;106!DOID:3119;1.42e-08;14!DOID:299;3.29e-08;25!DOID:154;1.87e-07;2!DOID:4236;1.87e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.03e-28,4;DOID:1612,1.03e-28,4;DOID:305,2.89e-18,106;DOID:0050687,1.98e-15,143;DOID:4430,3.98e-14,1;DOID:1799,2.07e-13,1;DOID:10165,2.07e-13,1;DOID:1798,2.07e-13,1;DOID:162,1.20e-08,235;DOID:3119,1.31e-08,14;DOID:14566,1.98e-08,239;DOID:299,3.17e-08,25;DOID:154,1.75e-07,2;DOID:4236,1.75e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.16e-10!155;UBERON:0001555!1.16e-10!155;UBERON:0007026!1.16e-10!155;UBERON:0004921!1.48e-10!129;UBERON:0004185!1.48e-10!129;UBERON:0001041!5.41e-09!98;UBERON:0004119!6.35e-09!169;UBERON:0000925!6.35e-09!169;UBERON:0006595!6.35e-09!169;UBERON:0000077!2.82e-08!130;UBERON:0008947!6.22e-08!38;UBERON:0003258!6.22e-08!38;UBERON:0005409!8.00e-08!35;UBERON:0001737!2.41e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;7.82e-12;10!UBERON:0001443;8.26e-11;11!UBERON:0006955;1.20e-07;2!UBERON:0004801;1.20e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,7.00e-12,10;UBERON:0001443,7.47e-11,11;UBERON:0006955,1.20e-07,2;UBERON:0004801,1.20e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.410502947249729,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.723033089650446,0.441175890929576,0,0.237270619111097,0.404493924480493,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0.935702702041099,0,0,0.445773537109913,0.284136146806413,0,0.296964680832639,0,0,0,0,0,0,0,0,3.52705846995986,0,0.123084805461069,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,1.5625665665114,0.874599999961957,0,0,0,0.709163045303809,0.689486746482929,0,1.21537496453305,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.987334088507493,0.108647371922008,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0.706765357169704,0,0,0.176915129006678,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.207376382794494,0,0.661983911750998,0,1.19472429772959,0.569219092059585,0,0,0,0.261177619741208,0,0,0.0967563312890851,0.292357268344742,0.164230914106418,0,0.176512253383001,0,0,0,0,0.586654148204409,0,0.213452994739353,0,1.15272333723285,0.572682980829578,1.88754497648161,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0.329663433524666,0.539228350833479,1.08270229666224,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.249960815924213,0,0,0,9.83503302194451,10.1444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0,0,0,0,0.558644917973244,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0.366857197043358,0,0,0.690359926060101,0,0,0,0,1.04762677792569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0.316027223465453,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0.196300467230486,0.121917924982269,0,0,0,0,0.233939463462106,0.397901550322736,0,1.46829906650648,0,0.603851374266694,0.231522474323834,0.218559560503957,4.70317296361523,0,6.3632667717439,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0.315543124386369,0,0,1.0580536810308,0,0,0,0,0,0,0,0.26721740526556,0,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p3@MNX1 | |||
}} |
Revision as of 20:20, 22 January 2014
Short description: | p3@MNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MNX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_NM_005515, uc003wna.2, uc003wnd.1_5end |
EntrezGene: | MNX1 |
HGNC: | 4979 |
UniProt: | P50219Q9UDY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.29e-26 | 2 |
peptide hormone secreting cell | 3.98e-14 | 1 |
enteroendocrine cell | 3.98e-14 | 1 |
type D enteroendocrine cell | 3.98e-14 | 1 |
somatostatin secreting cell | 3.98e-14 | 1 |
pancreatic D cell | 3.98e-14 | 1 |
progenitor cell of endocrine pancreas | 3.98e-14 | 1 |
keratinocyte | 3.04e-11 | 5 |
stratified squamous epithelial cell | 1.61e-09 | 6 |
keratin accumulating cell | 1.61e-09 | 6 |
stratified epithelial cell | 1.61e-09 | 6 |
keratinizing barrier epithelial cell | 1.61e-09 | 6 |
epithelial fate stem cell | 1.61e-09 | 6 |
stratified epithelial stem cell | 1.61e-09 | 6 |
surface ectodermal cell | 1.61e-09 | 6 |
epithelial cell | 6.10e-08 | 253 |
epithelial cell of cervix | 1.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
breast | 7.00e-12 | 10 |
chest | 7.47e-11 | 11 |
uterine epithelium | 1.20e-07 | 2 |
cervix epithelium | 1.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.03e-28 | 4 |
breast cancer | 1.03e-28 | 4 |
carcinoma | 2.89e-18 | 106 |
cell type cancer | 1.98e-15 | 143 |
somatostatinoma | 3.98e-14 | 1 |
islet cell tumor | 2.07e-13 | 1 |
endocrine pancreas cancer | 2.07e-13 | 1 |
pancreatic endocrine carcinoma | 2.07e-13 | 1 |
cancer | 1.20e-08 | 235 |
gastrointestinal system cancer | 1.31e-08 | 14 |
disease of cellular proliferation | 1.98e-08 | 239 |
adenocarcinoma | 3.17e-08 | 25 |
mixed cell type cancer | 1.75e-07 | 2 |
carcinosarcoma | 1.75e-07 | 2 |