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FFCP PHASE1:Hg19::chr8:42010122..42010136,-: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=728445|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=144bp_to_AK058085_5end|coexpression_cluster_id=C23|description=CAGE_peak_1_at_LOC728445_5end|id=chr8:42010122..42010136,-|ontology_enrichment_celltype=CL:0000738!4.86e-44!140;CL:0000037!2.33e-34!172;CL:0000566!2.33e-34!172;CL:0002087!3.19e-34!119;CL:0002031!4.28e-34!124;CL:0000988!3.71e-33!182;CL:0002032!2.08e-31!165;CL:0000837!2.08e-31!165;CL:0002057!2.62e-28!42;CL:0000766!2.43e-27!76;CL:0000860!1.81e-25!45;CL:0000557!5.93e-20!71;CL:0000839!3.71e-19!70;CL:0002009!5.40e-18!65;CL:0002194!1.06e-17!63;CL:0000576!1.06e-17!63;CL:0000040!1.06e-17!63;CL:0000559!1.06e-17!63;CL:0000763!3.31e-17!112;CL:0000049!3.31e-17!112;CL:0000791!4.82e-17!18;CL:0000789!4.82e-17!18;CL:0002420!4.82e-17!18;CL:0002419!4.82e-17!18;CL:0000790!4.82e-17!18;CL:0000838!3.63e-14!52;CL:0000542!1.08e-13!53;CL:0000051!1.08e-13!53;CL:0000084!9.61e-12!25;CL:0000827!9.61e-12!25;CL:0000134!1.07e-10!358;CL:0000094!2.48e-10!8;CL:0002320!6.50e-10!365;CL:0000625!8.54e-10!11;CL:0002393!1.19e-09!9;CL:0002397!1.19e-09!9;CL:0000624!1.37e-08!6;CL:0000048!1.97e-08!430;CL:0000034!5.11e-08!444;CL:0000723!6.87e-08!436;CL:0000219!1.16e-07!390;CL:0000236!4.85e-07!14;CL:0000081!7.56e-07!11|ontology_enrichment_celltype_v019=CL:0000791;1.05e-23;18!CL:0000789;1.05e-23;18!CL:0002419;1.05e-23;18!CL:0000094;1.16e-21;8!CL:0000624;1.15e-17;6!CL:0000084;4.04e-16;25!CL:0000081;2.55e-15;11!CL:0002393;9.80e-15;6!CL:0002397;9.80e-15;6!CL:0000542;5.77e-13;53!CL:0000625;3.64e-11;11!CL:0000898;6.96e-10;3!CL:0000775;2.42e-09;3!CL:0000623;2.56e-09;3!CL:0002087;3.78e-09;104!CL:0000236;4.73e-09;13!CL:0000226;5.50e-09;3!CL:0000842;5.50e-09;3!CL:0000738;7.05e-09;136!CL:0000767;1.33e-08;3!CL:0000766;8.08e-08;69!CL:0000771;3.99e-07;2!CL:0000815;4.35e-07;2!CL:0000792;4.35e-07;2!CL:0002677;4.35e-07;2!CL:0000988;7.84e-07;177|ontology_enrichment_celltype_v019_2=CL:0000738,1.57e-43,136;CL:0000037,1.25e-32,168;CL:0000988,2.82e-30,177;CL:0002032,8.22e-30,161;CL:0000837,8.22e-30,161;CL:0002087,3.76e-29,115;CL:0002031,7.48e-29,120;CL:0000791,1.03e-23,18;CL:0000789,1.03e-23,18;CL:0002420,1.03e-23,18;CL:0002419,1.03e-23,18;CL:0000790,1.03e-23,18;CL:0000838,4.48e-22,52;CL:0000094,1.17e-21,8;CL:0000542,1.55e-21,53;CL:0000051,1.55e-21,53;CL:0000766,2.96e-18,72;CL:0000624,1.16e-17,6;CL:0000084,4.00e-16,25;CL:0000827,4.00e-16,25;CL:0000081,2.55e-15,11;CL:0002393,8.77e-13,9;CL:0002397,8.77e-13,9;CL:0000625,3.59e-11,11;CL:0000860,5.44e-11,42;CL:0002057,5.44e-11,42;CL:0000763,5.69e-11,108;CL:0000049,5.69e-11,108;CL:0000898,6.97e-10,3;CL:0000557,2.14e-09,67;CL:0000775,2.40e-09,3;CL:0000623,2.46e-09,3;CL:0000825,2.46e-09,3;CL:0000473,3.66e-09,48;CL:0000234,3.66e-09,48;CL:0000134,4.11e-09,354;CL:0000226,5.29e-09,3;CL:0000842,5.29e-09,3;CL:0002320,1.09e-08,361;CL:0000767,1.34e-08,3;CL:0000839,1.84e-08,66;CL:0000236,2.07e-08,14;CL:0000219,9.94e-08,386;CL:0002009,2.53e-07,61;CL:0000771,4.00e-07,2;CL:0000815,4.36e-07,2;CL:0000792,4.36e-07,2;CL:0002677,4.36e-07,2|ontology_enrichment_development_v019=CL:0000790;1.05e-23;18!CL:0000051;5.77e-13;53!CL:0002057;2.80e-08;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.58e-28!112;UBERON:0002390!6.27e-28!102;UBERON:0003061!6.27e-28!102;UBERON:0002371!5.80e-18!80;UBERON:0001474!1.71e-16!86;UBERON:0002405!5.61e-14!115;UBERON:0004765!3.85e-13!101;UBERON:0001434!3.85e-13!101;UBERON:0000178!1.13e-11!15;UBERON:0000179!1.13e-11!15;UBERON:0000463!1.13e-11!15;UBERON:0003081!2.07e-09!216;UBERON:0002384!3.37e-09!375|ontology_enrichment_uberon_v019=UBERON:0000178;8.11e-10;15!UBERON:0000179;8.11e-10;15!UBERON:0000463;8.11e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.49e-13,98;UBERON:0003061,1.49e-13,98;UBERON:0002193,1.19e-11,108;UBERON:0000178,1.06e-09,15;UBERON:0000179,1.06e-09,15;UBERON:0000463,1.06e-09,15;UBERON:0002384,4.05e-08,371;UBERON:0002371,9.06e-08,76;UBERON:0001474,6.82e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,3.83829398097213,2.47705797305722,0,0.30120591877825,0,0,0,0.587200878669695,2.21598163412751,2.80762226458198,3.25516306073778,0,0,0,0.290796477559129,0.377875943688809,1.21292030593908,1.39457422143411,0.411167888021826,0.619412741790207,0.863077176966451,1.5369642391746,0.709446689665756,1.72372840368309,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0.918251677112708,0.320929027076094,3.19668562899521,0.659702600373432,0.598390972864896,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,1.00499466102697,1.5644487552606,1.08594422352558,0,1.47311054395026,0.316462387440884,1.26753171787165,1.91343869968539,2.09658645508376,0.44931452458598,0.450530678524519,0.32145117339416,0.855038231223746,1.19350006319454,0.547992461293902,0,3.27683166757279,0.889509253863555,1.28019066769952,0.800791974072025,2.87376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{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=728445
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA
|HGNC=
|TSSclassifier=strong
|UniProt=
|association_with_transcript=144bp_to_AK058085_5end
|coexpression_cluster_id=C23
|description=CAGE_peak_1_at_LOC728445_5end
|id=chr8:42010122..42010136,-
|ontology_enrichment_celltype=CL:0000738!4.86e-44!140;CL:0000037!2.33e-34!172;CL:0000566!2.33e-34!172;CL:0002087!3.19e-34!119;CL:0002031!4.28e-34!124;CL:0000988!3.71e-33!182;CL:0002032!2.08e-31!165;CL:0000837!2.08e-31!165;CL:0002057!2.62e-28!42;CL:0000766!2.43e-27!76;CL:0000860!1.81e-25!45;CL:0000557!5.93e-20!71;CL:0000839!3.71e-19!70;CL:0002009!5.40e-18!65;CL:0002194!1.06e-17!63;CL:0000576!1.06e-17!63;CL:0000040!1.06e-17!63;CL:0000559!1.06e-17!63;CL:0000763!3.31e-17!112;CL:0000049!3.31e-17!112;CL:0000791!4.82e-17!18;CL:0000789!4.82e-17!18;CL:0002420!4.82e-17!18;CL:0002419!4.82e-17!18;CL:0000790!4.82e-17!18;CL:0000838!3.63e-14!52;CL:0000542!1.08e-13!53;CL:0000051!1.08e-13!53;CL:0000084!9.61e-12!25;CL:0000827!9.61e-12!25;CL:0000134!1.07e-10!358;CL:0000094!2.48e-10!8;CL:0002320!6.50e-10!365;CL:0000625!8.54e-10!11;CL:0002393!1.19e-09!9;CL:0002397!1.19e-09!9;CL:0000624!1.37e-08!6;CL:0000048!1.97e-08!430;CL:0000034!5.11e-08!444;CL:0000723!6.87e-08!436;CL:0000219!1.16e-07!390;CL:0000236!4.85e-07!14;CL:0000081!7.56e-07!11
|ontology_enrichment_celltype_v019=CL:0000791;1.05e-23;18!CL:0000789;1.05e-23;18!CL:0002419;1.05e-23;18!CL:0000094;1.16e-21;8!CL:0000624;1.15e-17;6!CL:0000084;4.04e-16;25!CL:0000081;2.55e-15;11!CL:0002393;9.80e-15;6!CL:0002397;9.80e-15;6!CL:0000542;5.77e-13;53!CL:0000625;3.64e-11;11!CL:0000898;6.96e-10;3!CL:0000775;2.42e-09;3!CL:0000623;2.56e-09;3!CL:0002087;3.78e-09;104!CL:0000236;4.73e-09;13!CL:0000226;5.50e-09;3!CL:0000842;5.50e-09;3!CL:0000738;7.05e-09;136!CL:0000767;1.33e-08;3!CL:0000766;8.08e-08;69!CL:0000771;3.99e-07;2!CL:0000815;4.35e-07;2!CL:0000792;4.35e-07;2!CL:0002677;4.35e-07;2!CL:0000988;7.84e-07;177
|ontology_enrichment_celltype_v019_2=CL:0000738,1.57e-43,136;CL:0000037,1.25e-32,168;CL:0000988,2.82e-30,177;CL:0002032,8.22e-30,161;CL:0000837,8.22e-30,161;CL:0002087,3.76e-29,115;CL:0002031,7.48e-29,120;CL:0000791,1.03e-23,18;CL:0000789,1.03e-23,18;CL:0002420,1.03e-23,18;CL:0002419,1.03e-23,18;CL:0000790,1.03e-23,18;CL:0000838,4.48e-22,52;CL:0000094,1.17e-21,8;CL:0000542,1.55e-21,53;CL:0000051,1.55e-21,53;CL:0000766,2.96e-18,72;CL:0000624,1.16e-17,6;CL:0000084,4.00e-16,25;CL:0000827,4.00e-16,25;CL:0000081,2.55e-15,11;CL:0002393,8.77e-13,9;CL:0002397,8.77e-13,9;CL:0000625,3.59e-11,11;CL:0000860,5.44e-11,42;CL:0002057,5.44e-11,42;CL:0000763,5.69e-11,108;CL:0000049,5.69e-11,108;CL:0000898,6.97e-10,3;CL:0000557,2.14e-09,67;CL:0000775,2.40e-09,3;CL:0000623,2.46e-09,3;CL:0000825,2.46e-09,3;CL:0000473,3.66e-09,48;CL:0000234,3.66e-09,48;CL:0000134,4.11e-09,354;CL:0000226,5.29e-09,3;CL:0000842,5.29e-09,3;CL:0002320,1.09e-08,361;CL:0000767,1.34e-08,3;CL:0000839,1.84e-08,66;CL:0000236,2.07e-08,14;CL:0000219,9.94e-08,386;CL:0002009,2.53e-07,61;CL:0000771,4.00e-07,2;CL:0000815,4.36e-07,2;CL:0000792,4.36e-07,2;CL:0002677,4.36e-07,2
|ontology_enrichment_development_v019=CL:0000790;1.05e-23;18!CL:0000051;5.77e-13;53!CL:0002057;2.80e-08;42
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!4.58e-28!112;UBERON:0002390!6.27e-28!102;UBERON:0003061!6.27e-28!102;UBERON:0002371!5.80e-18!80;UBERON:0001474!1.71e-16!86;UBERON:0002405!5.61e-14!115;UBERON:0004765!3.85e-13!101;UBERON:0001434!3.85e-13!101;UBERON:0000178!1.13e-11!15;UBERON:0000179!1.13e-11!15;UBERON:0000463!1.13e-11!15;UBERON:0003081!2.07e-09!216;UBERON:0002384!3.37e-09!375
|ontology_enrichment_uberon_v019=UBERON:0000178;8.11e-10;15!UBERON:0000179;8.11e-10;15!UBERON:0000463;8.11e-10;15
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.49e-13,98;UBERON:0003061,1.49e-13,98;UBERON:0002193,1.19e-11,108;UBERON:0000178,1.06e-09,15;UBERON:0000179,1.06e-09,15;UBERON:0000463,1.06e-09,15;UBERON:0002384,4.05e-08,371;UBERON:0002371,9.06e-08,76;UBERON:0001474,6.82e-07,82
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|short_description=p1@LOC728445
}}

Revision as of 21:51, 22 January 2014

Short description:p1@LOC728445
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_LOC728445_5end
Coexpression cluster:C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14
Association with transcript: 144bp_to_AK058085_5end
EntrezGene:LOC728445
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data