FFCP PHASE1:Hg19::chr8:60032478..60032492,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENST00000517898,uc003xty.1_5end | |||
|description=CAGE_peak_2_at_ENST00000517898_5end,CAGE_peak_2_at_uc003xty.1_5end | |||
|id=chr8:60032478..60032492,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002367;2.17e-22;2!CL:0002605;9.29e-15;3!CL:0002553;3.09e-12;1!CL:0000128;7.86e-07;7!CL:0000126;7.86e-07;7!CL:0000127;7.86e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002367,2.30e-22,2;CL:0002605,1.07e-14,3;CL:0002553,3.27e-12,1;CL:0000128,8.34e-07,7;CL:0000126,8.34e-07,7;CL:0000127,8.34e-07,7;CL:0002453,8.34e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.68e-13!129;UBERON:0007811!1.68e-13!129;UBERON:0004121!5.16e-13!169;UBERON:0000924!5.74e-13!173;UBERON:0006601!5.74e-13!173;UBERON:0000033!4.73e-12!123;UBERON:0005743!1.25e-11!86;UBERON:0000073!3.58e-11!94;UBERON:0001016!3.58e-11!94;UBERON:0001017!6.20e-11!82;UBERON:0003075!1.26e-10!86;UBERON:0007284!1.26e-10!86;UBERON:0002346!1.89e-10!90;UBERON:0000475!1.64e-08!365;UBERON:0000955!4.23e-08!69;UBERON:0006238!4.23e-08!69;UBERON:0003056!5.85e-08!61;UBERON:0002616!2.44e-07!59;UBERON:0001049!4.99e-07!57;UBERON:0005068!4.99e-07!57;UBERON:0006241!4.99e-07!57;UBERON:0007135!4.99e-07!57;UBERON:0002020!9.84e-07!34;UBERON:0003528!9.84e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0005969;2.17e-22;2!UBERON:0003956;2.17e-22;2!UBERON:0002370;1.26e-21;2!UBERON:0005058;1.26e-21;2!UBERON:0009113;1.26e-21;2!UBERON:0004177;3.17e-09;5!UBERON:0005057;3.17e-09;5!UBERON:0002203;4.41e-08;6!UBERON:0001768;4.41e-08;6!UBERON:0002200;4.41e-08;6!UBERON:0001801;2.27e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,2.30e-22,2;UBERON:0003956,2.30e-22,2;UBERON:0002370,2.63e-11,4;UBERON:0005058,2.63e-11,4;UBERON:0009113,2.63e-11,4;UBERON:0003295,2.63e-11,4;UBERON:0005562,2.63e-11,4;UBERON:0002203,4.50e-08,6;UBERON:0001768,4.50e-08,6;UBERON:0002200,4.50e-08,6;UBERON:0003351,7.85e-08,6;UBERON:0001801,2.51e-07,14;UBERON:0004177,7.86e-07,7;UBERON:0005057,7.86e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0.738726348460727,0,0.626909442956176,1.43117993565528,1.09499540058307,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.790152254325231,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.351339142772504,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70296429550139,0,0,0,0,0.161872944368132,0.140450806702248,0.408308342509787,0.122834317311768,0,0,0.247266929278557,0,0,0.673344455816265,0.500474079487857,0,0,0.612975591598039,0.300476117813194,0,0,0.213557388818567,0.211931901159562,0,0,0.515281080091258,0.744467425326359,0,0,0,0,0.80823028409406,0.355009592516614,0.10075209822764,0.67824236924195,0,0,0,0.121973706129595,0,0.348581828608555,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.977424915930974,1.03993478527958,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,1.03664057770386,0.864719720501769,0.37872730027914,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0,0.183138929636687,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65631221636001,3.14941248220485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77854608371035,0,0.199579371432817,0,0,3.24621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.36408156524854,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,1.18219047581419,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,6.90713128138109,0.831058409500782,0,0,0,0,0.317873157960757,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0.114536596165916,2.23073497220554,0,0.869767748958028,0,0,0.418411385249333,0.101998217636322,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0.242998226632099,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0,0,0,0,0,0,0,0,4.01915574656957,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.436838552768056,0,0,0.123935764259002,0,0,0.394308725006267,4.00285374142735,0.352675943690684,1.531227386766,0.0642292250964595,0,0,0.205116364240755,0.252071696221718,0.276629009856872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,2.97300226943921,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0.297046400327086,0,0,0.187967835959707,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0.631086248772738,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0.267964130156178,0,0,0,0.714193294391221,1.48554492622814,1.1794195716213,0,0,0,0.217716747896961,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p2@ENST00000517898,p2@uc003xty.1 | |||
}} |
Revision as of 22:12, 22 January 2014
Short description: | p2@ENST00000517898, p2@uc003xty.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000517898_5end, CAGE_peak_2_at_uc003xty.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000517898, uc003xty.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trabecular meshwork cell | 2.30e-22 | 2 |
astrocyte of the cerebral cortex | 1.07e-14 | 3 |
lung fibroblast | 3.27e-12 | 1 |
oligodendrocyte | 8.34e-07 | 7 |
macroglial cell | 8.34e-07 | 7 |
astrocyte | 8.34e-07 | 7 |
oligodendrocyte precursor cell | 8.34e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 2.30e-22 | 2 |
aqueous drainage system | 2.30e-22 | 2 |
thymus | 2.63e-11 | 4 |
hemolymphoid system gland | 2.63e-11 | 4 |
thymic region | 2.63e-11 | 4 |
pharyngeal gland | 2.63e-11 | 4 |
thymus primordium | 2.63e-11 | 4 |
vasculature of eye | 4.50e-08 | 6 |
uvea | 4.50e-08 | 6 |
vasculature of head | 4.50e-08 | 6 |
pharyngeal epithelium | 7.85e-08 | 6 |
anterior segment of eyeball | 2.51e-07 | 14 |
hemopoietic organ | 7.86e-07 | 7 |
immune organ | 7.86e-07 | 7 |