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CL:0000346: Difference between revisions

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|located_in=
|located_in=
|name=hair follicle dermal papilla cell
|name=hair follicle dermal papilla cell
|namespace=cell
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0000412
|part_of=UBERON:0000412

Latest revision as of 16:33, 12 September 2014

Name:hair follicle dermal papilla cell
Namespace:FANTOM
Definition:"A specialized mesenchymal cell that resides in the dermal papilla located at the bottom of hair follicles. This cell plays a pivotal roles in hair formation, growth, and cycling." [GOC:tfm, PMID:9893172]


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000134(mesenchymal cell),EFO:0000324(cell type)
develops_from:CL:0000333(migratory neural crest cell)
part_of:UBERON:0000412(dermal papilla)



Children


derives from:FF:0000071 (human hair follicle dermal papilla cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 11271-116H2 (Hair Follicle Dermal Papilla Cells, donor1)
  • 11348-117G7 (Hair Follicle Dermal Papilla Cells, donor2)
  • 11420-118F7 (Hair Follicle Dermal Papilla Cells, donor3)

Mouse (Mus musculus)

  • 11271-116H2 (Hair Follicle Dermal Papilla Cells, donor1)
  • 11348-117G7 (Hair Follicle Dermal Papilla Cells, donor2)
  • 11420-118F7 (Hair Follicle Dermal Papilla Cells, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000346 (hair follicle dermal papilla cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data