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UBERON:0005172: Difference between revisions

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Line 12: Line 12:
|is_obsolete=
|is_obsolete=
|located_in=
|located_in=
|name=abdomen organ
|name=abdomen element
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0000916
|part_of=UBERON:0000916

Latest revision as of 17:51, 12 September 2014

Name:abdomen element
Namespace:FANTOM
Definition:"An organ that is part of an abdomen [Obol]." [OBOL:automatic]
Xrefs:
links:

MA:0000522

SCTID:272631008
Subset: organ_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0005173(abdominal segment element)
part_of:UBERON:0000916(abdomen)



Children

is a:UBERON:0002107 (liver),UBERON:0002113 (kidney),UBERON:0006858 (adrenal/interrenal gland),UBERON:0017672 (abdominal viscera)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005172 (abdomen element), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data