UBERON:0010312: Difference between revisions
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|located_in= | |located_in= | ||
|name=immature eye | |name=immature eye | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 18:08, 12 September 2014
| Name: | immature eye | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Developing anatomical structure that develops into the eyeball and associated structures." [ZFA:0001678] | ||
| Xrefs: |
| ||
| Synonyms: | "future eye" EXACT [] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| develops_from: | UBERON:0003071(eye primordium) |
Children
| is a: | UBERON:0003073 (lens placode),UBERON:0003314 (eye mesenchyme),UBERON:0005424 (presumptive retinal pigmented epithelium),UBERON:0005425 (presumptive neural retina),UBERON:0005427 (corneal primordium) |
|---|---|
| part of: | UBERON:0003072 (optic cup),UBERON:0003073 (lens placode),UBERON:0004128 (optic vesicle) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010312 (immature eye), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.31e-86 | FFCP PHASE2:Mm9::chr17:31815126..31815139,-#_e5b3f144363a7a6107f0f4054c060f4d | p@chr17:31815126..31815139, - |
| 1.31e-86 | FFCP PHASE2:Mm9::chr17:31818106..31818119,+#_e5b3f144363a7a6107f0f4054c060f4d | p@chr17:31818106..31818119, + |
| 1.31e-86 | FFCP PHASE1:Mm9::chr11:77532283..77532316,-#_e5b3f144363a7a6107f0f4054c060f4d | p@chr11:77532283..77532316, - |
| 1.31e-86 | FFCP PHASE2:Mm9::chr4:133799669..133799683,+#_e5b3f144363a7a6107f0f4054c060f4d | p1@E130218I03Rik |
| 1.31e-86 | FFCP PHASE1:Mm9::chr17:31817987..31818013,+#_e5b3f144363a7a6107f0f4054c060f4d | p@chr17:31817987..31818013, + |
| 1.31e-86 | FFCP PHASE2:Mm9::chr14:118451218..118451221,-#_e5b3f144363a7a6107f0f4054c060f4d | p4@Dct |
| 1.31e-86 | FFCP PHASE2:Mm9::chr11:3622163..3622187,-#_e5b3f144363a7a6107f0f4054c060f4d | p8@Osbp2 |
| 1.31e-86 | FFCP PHASE1:Mm9::chr14:118451218..118451221,-#_e5b3f144363a7a6107f0f4054c060f4d | p4@Dct |
| 1.31e-86 | FFCP PHASE1:Mm9::chr10:127668442..127668453,+#_e5b3f144363a7a6107f0f4054c060f4d | p@chr10:127668442..127668453, + |
| 1.31e-86 | FFCP PHASE1:Mm9::chr3:129525389..129525400,-#_e5b3f144363a7a6107f0f4054c060f4d | p@chr3:129525389..129525400, - |
| 1.31e-86 | FFCP PHASE1:Mm9::chr9:89697580..89697585,-#_e5b3f144363a7a6107f0f4054c060f4d | p1@Mir184 |
| 1.31e-86 | FFCP PHASE1:Mm9::chr17:31818263..31818276,+#_e5b3f144363a7a6107f0f4054c060f4d | p@chr17:31818263..31818276, + |
| 1.31e-86 | FFCP PHASE2:Mm9::chr17:31817987..31818013,+#_e5b3f144363a7a6107f0f4054c060f4d | p@chr17:31817987..31818013, + |
| 1.31e-86 | FFCP PHASE2:Mm9::chr16:21743134..21743139,-#_e5b3f144363a7a6107f0f4054c060f4d | p@chr16:21743134..21743139, - |
| 1.31e-86 | FFCP PHASE1:Mm9::chr10:67364011..67364018,-#_e5b3f144363a7a6107f0f4054c060f4d | p5@Zfp365 |
| 1.31e-86 | FFCP PHASE2:Mm9::chr11:77532391..77532408,-#_e5b3f144363a7a6107f0f4054c060f4d | p@chr11:77532391..77532408, - |
| 1.31e-86 | FFCP PHASE2:Mm9::chr3:129525389..129525400,-#_e5b3f144363a7a6107f0f4054c060f4d | p@chr3:129525389..129525400, - |
| 1.31e-86 | FFCP PHASE2:Mm9::chr9:89697580..89697585,-#_e5b3f144363a7a6107f0f4054c060f4d | p1@Mir184 |
| 1.31e-86 | FFCP PHASE1:Mm9::chr2:90827760..90827769,+#_e5b3f144363a7a6107f0f4054c060f4d | p6@Celf1 |
| 1.31e-86 | FFCP PHASE1:Mm9::chr17:31818106..31818119,+#_e5b3f144363a7a6107f0f4054c060f4d | p@chr17:31818106..31818119, + |
| 1.31e-86 | FFCP PHASE2:Mm9::chr11:77532283..77532316,-#_e5b3f144363a7a6107f0f4054c060f4d | p@chr11:77532283..77532316, - |
| 1.31e-86 | FFCP PHASE1:Mm9::chr16:21743134..21743139,-#_e5b3f144363a7a6107f0f4054c060f4d | p@chr16:21743134..21743139, - |
| 1.31e-86 | FFCP PHASE2:Mm9::chr11:3622192..3622225,-#_e5b3f144363a7a6107f0f4054c060f4d | p3@Osbp2 |
| 1.31e-86 | FFCP PHASE2:Mm9::chr10:127668442..127668453,+#_e5b3f144363a7a6107f0f4054c060f4d | p@chr10:127668442..127668453, + |
| 1.31e-86 | FFCP PHASE2:Mm9::chr2:90827760..90827769,+#_e5b3f144363a7a6107f0f4054c060f4d | p6@Celf1 |
| 1.31e-86 | FFCP PHASE1:Mm9::chr11:3622163..3622187,-#_e5b3f144363a7a6107f0f4054c060f4d | p8@Osbp2 |
| 1.31e-86 | FFCP PHASE2:Mm9::chr17:31818263..31818276,+#_e5b3f144363a7a6107f0f4054c060f4d | p@chr17:31818263..31818276, + |
| 1.31e-86 | FFCP PHASE1:Mm9::chr11:77532391..77532408,-#_e5b3f144363a7a6107f0f4054c060f4d | p@chr11:77532391..77532408, - |
| 1.31e-86 | FFCP PHASE1:Mm9::chr4:133799669..133799683,+#_e5b3f144363a7a6107f0f4054c060f4d | p1@E130218I03Rik |
| 1.31e-86 | FFCP PHASE1:Mm9::chr11:3622192..3622225,-#_e5b3f144363a7a6107f0f4054c060f4d | p3@Osbp2 |
| 1.31e-86 | FFCP PHASE1:Mm9::chr17:31815126..31815139,-#_e5b3f144363a7a6107f0f4054c060f4d | p@chr17:31815126..31815139, - |
| 1.31e-86 | FFCP PHASE2:Mm9::chr10:67364011..67364018,-#_e5b3f144363a7a6107f0f4054c060f4d | p5@Zfp365 |
| 2.3e-78 | FFCP PHASE2:Mm9::chr10:127668637..127668650,+#_3aec7d1de8972ca2b3aab3f86bda762c | p3@LOC100504989, p3@Timeless |
| 2.3e-78 | FFCP PHASE2:Mm9::chr7:64675015..64675028,+#_3aec7d1de8972ca2b3aab3f86bda762c | p@chr7:64675015..64675028, + |
| 2.3e-78 | FFCP PHASE1:Mm9::chr7:64675015..64675028,+#_3aec7d1de8972ca2b3aab3f86bda762c | p@chr7:64675015..64675028, + |
| 2.3e-78 | FFCP PHASE1:Mm9::chr10:127668637..127668650,+#_3aec7d1de8972ca2b3aab3f86bda762c | p3@LOC100504989, p3@Timeless |
| 2.82e-78 | FFCP PHASE1:Mm9::chr2:105509100..105509107,+#_ae65acd0be135585e7616dc636852083 | p6@Pax6 |
| 2.82e-78 | FFCP PHASE2:Mm9::chr2:105509100..105509107,+#_ae65acd0be135585e7616dc636852083 | p6@Pax6 |
| 2.82e-78 | FFCP PHASE2:Mm9::chr6:97891135..97891147,+#_ae65acd0be135585e7616dc636852083 | p@chr6:97891135..97891147, + |
| 2.82e-78 | FFCP PHASE1:Mm9::chr6:97891135..97891147,+#_ae65acd0be135585e7616dc636852083 | p@chr6:97891135..97891147, + |
| 3.46e-78 | FFCP PHASE1:Mm9::chr14:49498256..49498278,+#_6e09b1cb543aab9cdeb63e22fc322b5c | p1@4933429O19Rik |
| 3.46e-78 | FFCP PHASE2:Mm9::chr14:49498256..49498278,+#_6e09b1cb543aab9cdeb63e22fc322b5c | p1@4933429O19Rik |
| 4.97e-77 | FFCP PHASE1:Mm9::chr3:129525452..129525463,-#_f67c31729e4099c0cf5882dac49e7174 | p3@Rrh |
| 4.97e-77 | FFCP PHASE2:Mm9::chr5:112692580..112692595,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:112692580..112692595, + |
| 4.97e-77 | FFCP PHASE2:Mm9::chr14:49501519..49501530,-#_f67c31729e4099c0cf5882dac49e7174 | p@chr14:49501519..49501530, - |
| 4.97e-77 | FFCP PHASE1:Mm9::chr7:29477874..29477889,+#_f67c31729e4099c0cf5882dac49e7174 | p6@Fbxo27 |
| 4.97e-77 | FFCP PHASE2:Mm9::chr17:31818629..31818644,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr17:31818629..31818644, + |
| 4.97e-77 | FFCP PHASE1:Mm9::chr5:113507470..113507483,-#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:113507470..113507483, - |
| 4.97e-77 | FFCP PHASE2:Mm9::chr1:152166537..152166579,+#_f67c31729e4099c0cf5882dac49e7174 | p1@Pdc |
| 4.97e-77 | FFCP PHASE1:Mm9::chr10:127668799..127668810,+#_f67c31729e4099c0cf5882dac49e7174 | p5@LOC100504989, p5@Timeless |
| 4.97e-77 | FFCP PHASE2:Mm9::chr5:113504891..113504916,-#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:113504891..113504916, - |
| 4.97e-77 | FFCP PHASE2:Mm9::chr3:129525452..129525463,-#_f67c31729e4099c0cf5882dac49e7174 | p3@Rrh |
| 4.97e-77 | FFCP PHASE1:Mm9::chr1:38092602..38092616,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr1:38092602..38092616, + |
| 4.97e-77 | FFCP PHASE2:Mm9::chr17:31817947..31817965,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr17:31817947..31817965, + |
| 4.97e-77 | FFCP PHASE2:Mm9::chr8:77582172..77582183,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr8:77582172..77582183, + |
| 4.97e-77 | FFCP PHASE2:Mm9::chr6:85969237..85969247,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr6:85969237..85969247, + |
| 4.97e-77 | FFCP PHASE1:Mm9::chr5:112686483..112686494,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:112686483..112686494, + |
| 4.97e-77 | FFCP PHASE2:Mm9::chr1:65147201..65147212,-#_f67c31729e4099c0cf5882dac49e7174 | p@chr1:65147201..65147212, - |
| 4.97e-77 | FFCP PHASE2:Mm9::chr2:93906955..93906973,-#_f67c31729e4099c0cf5882dac49e7174 | p2@Hsd17b12 |
| 4.97e-77 | FFCP PHASE2:Mm9::chr11:95705150..95705170,+#_f67c31729e4099c0cf5882dac49e7174 | p3@Gngt2 |
| 4.97e-77 | FFCP PHASE2:Mm9::chr7:29477874..29477889,+#_f67c31729e4099c0cf5882dac49e7174 | p6@Fbxo27 |
| 4.97e-77 | FFCP PHASE1:Mm9::chr5:112696408..112696421,-#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:112696408..112696421, - |
| 4.97e-77 | FFCP PHASE2:Mm9::chr4:19208009..19208054,+#_f67c31729e4099c0cf5882dac49e7174 | p1@Cngb3 |
| 4.97e-77 | FFCP PHASE2:Mm9::chr10:127668686..127668697,+#_f67c31729e4099c0cf5882dac49e7174 | p4@LOC100504989, p4@Timeless |
| 4.97e-77 | FFCP PHASE1:Mm9::chr14:35413322..35413333,-#_f67c31729e4099c0cf5882dac49e7174 | p1@Opn4 |
| 4.97e-77 | FFCP PHASE1:Mm9::chr16:56204438..56204451,+#_f67c31729e4099c0cf5882dac49e7174 | p1@Impg2 |
| 4.97e-77 | FFCP PHASE2:Mm9::chr17:31818215..31818239,-#_f67c31729e4099c0cf5882dac49e7174 | p@chr17:31818215..31818239, - |
| 4.97e-77 | FFCP PHASE2:Mm9::chr9:107964319..107964338,-#_f67c31729e4099c0cf5882dac49e7174 | p11@Rnf123 |
| 4.97e-77 | FFCP PHASE2:Mm9::chr5:112681470..112681483,-#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:112681470..112681483, - |
| 4.97e-77 | FFCP PHASE1:Mm9::chr5:113504891..113504916,-#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:113504891..113504916, - |
| 4.97e-77 | FFCP PHASE1:Mm9::chr5:112675556..112675574,-#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:112675556..112675574, - |
| 4.97e-77 | FFCP PHASE1:Mm9::chr3:34488839..34488876,+#_f67c31729e4099c0cf5882dac49e7174 | p1@ENSMUST00000173365 |
| 4.97e-77 | FFCP PHASE2:Mm9::chr10:93761330..93761358,-#_f67c31729e4099c0cf5882dac49e7174 | p1@Gm4792 |
| 4.97e-77 | FFCP PHASE1:Mm9::chr6:85969237..85969247,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr6:85969237..85969247, + |
| 4.97e-77 | FFCP PHASE2:Mm9::chr5:112691047..112691066,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:112691047..112691066, + |
| 4.97e-77 | FFCP PHASE2:Mm9::chr11:77532270..77532280,-#_f67c31729e4099c0cf5882dac49e7174 | p@chr11:77532270..77532280, - |
| 4.97e-77 | FFCP PHASE1:Mm9::chr7:28282354..28282365,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr7:28282354..28282365, + |
| 4.97e-77 | FFCP PHASE1:Mm9::chr8:77582172..77582183,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr8:77582172..77582183, + |
| 4.97e-77 | FFCP PHASE1:Mm9::chr5:112691047..112691066,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:112691047..112691066, + |
| 4.97e-77 | FFCP PHASE2:Mm9::chr1:38092602..38092616,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr1:38092602..38092616, + |
| 4.97e-77 | FFCP PHASE2:Mm9::chr14:35413322..35413333,-#_f67c31729e4099c0cf5882dac49e7174 | p1@Opn4 |
| 4.97e-77 | FFCP PHASE2:Mm9::chr5:112690729..112690741,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:112690729..112690741, + |
| 4.97e-77 | FFCP PHASE1:Mm9::chr5:112690729..112690741,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:112690729..112690741, + |
| 4.97e-77 | FFCP PHASE1:Mm9::chr5:113506190..113506202,-#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:113506190..113506202, - |
| 4.97e-77 | FFCP PHASE2:Mm9::chr5:112696408..112696421,-#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:112696408..112696421, - |
| 4.97e-77 | FFCP PHASE2:Mm9::chr1:65147224..65147236,-#_f67c31729e4099c0cf5882dac49e7174 | p@chr1:65147224..65147236, - |
| 4.97e-77 | FFCP PHASE1:Mm9::chr10:127668480..127668491,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr10:127668480..127668491, + |
| 4.97e-77 | FFCP PHASE1:Mm9::chr1:65147201..65147212,-#_f67c31729e4099c0cf5882dac49e7174 | p@chr1:65147201..65147212, - |
| 4.97e-77 | FFCP PHASE2:Mm9::chr14:52730585..52730607,+#_f67c31729e4099c0cf5882dac49e7174 | p1@Rpgrip1 |
| 4.97e-77 | FFCP PHASE1:Mm9::chr1:38092538..38092550,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr1:38092538..38092550, + |
| 4.97e-77 | FFCP PHASE2:Mm9::chr10:127668799..127668810,+#_f67c31729e4099c0cf5882dac49e7174 | p5@LOC100504989, p5@Timeless |
| 4.97e-77 | FFCP PHASE2:Mm9::chr5:112690636..112690656,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:112690636..112690656, + |
| 4.97e-77 | FFCP PHASE1:Mm9::chr17:31816514..31816526,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr17:31816514..31816526, + |
| 4.97e-77 | FFCP PHASE1:Mm9::chr5:112690636..112690656,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:112690636..112690656, + |
| 4.97e-77 | FFCP PHASE2:Mm9::chr1:65149656..65149674,-#_f67c31729e4099c0cf5882dac49e7174 | p2@Cryga |
| 4.97e-77 | FFCP PHASE1:Mm9::chr4:19208009..19208054,+#_f67c31729e4099c0cf5882dac49e7174 | p1@Cngb3 |
| 4.97e-77 | FFCP PHASE2:Mm9::chr7:28282354..28282365,+#_f67c31729e4099c0cf5882dac49e7174 | p@chr7:28282354..28282365, + |
| 4.97e-77 | FFCP PHASE1:Mm9::chr5:112681470..112681483,-#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:112681470..112681483, - |
| 4.97e-77 | FFCP PHASE2:Mm9::chr5:113506006..113506025,-#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:113506006..113506025, - |
| 4.97e-77 | FFCP PHASE1:Mm9::chr5:112698505..112698537,-#_f67c31729e4099c0cf5882dac49e7174 | p@chr5:112698505..112698537, - |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Multi-tissue structure that consists of the structures that develop into the retina and lens.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
