FFCP PHASE1:Hg19::chr10:112631547..112631558,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=27250 | |EntrezGene=entrezgene:27250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=8763 | |HGNC=HGNC:8763 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=B4DKX4,Q53EL6,B2RCV4,B5ME91 | |UniProt=uniprot:B4DKX4,uniprot:Q53EL6,uniprot:B2RCV4,uniprot:B5ME91 | ||
|association_with_transcript=0bp_to_NM_001199492,NM_014456,NM_145341_5end | |association_with_transcript=0bp_to_NM_001199492,NM_014456,NM_145341_5end | ||
|cluster_id=chr10:112631547..112631558,+ | |||
|description=CAGE_peak_5_at_PDCD4_5end | |description=CAGE_peak_5_at_PDCD4_5end | ||
|id=chr10:112631547..112631558,+ | |id=chr10:112631547..112631558,+ |
Revision as of 10:26, 23 July 2015
Short description: | p5@PDCD4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PDCD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001199492, NM_014456, NM_145341_5end |
EntrezGene: | 27250 |
HGNC: | 8763 |
UniProt: | B4DKX4Q53EL6B2RCV4B5ME91 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@PDCD4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.22e-18 | 18 |
alpha-beta T cell | 2.22e-18 | 18 |
immature T cell | 2.22e-18 | 18 |
mature T cell | 2.22e-18 | 18 |
immature alpha-beta T cell | 2.22e-18 | 18 |
hematopoietic stem cell | 1.41e-16 | 168 |
leukocyte | 5.16e-16 | 136 |
nongranular leukocyte | 2.36e-15 | 115 |
hematopoietic cell | 3.22e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 3.63e-15 | 120 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.51e-10 | 98 |
blood island | 1.51e-10 | 98 |
hemolymphoid system | 2.21e-09 | 108 |
gland of gut | 2.27e-08 | 10 |
Showing 1 to 4 of 4 entries