FFCP PHASE1:Hg19::chr11:113779704..113779727,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=9177 | |EntrezGene=entrezgene:9177 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=5298 | |HGNC=HGNC:5298 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000537778_5end | |association_with_transcript=0bp_to_ENST00000537778_5end | ||
|cluster_id=chr11:113779704..113779727,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_HTR3B_5end | |description=CAGE_peak_1_at_HTR3B_5end | ||
Revision as of 18:20, 23 July 2015
| Short description: | p1@HTR3B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_HTR3B_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 0bp_to_ENST00000537778_5end |
| EntrezGene: | 9177 |
| HGNC: | 5298 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@HTR3B |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
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3.5
4.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neocortex | 6.65e-84 | 20 |
| regional part of cerebral cortex | 1.26e-76 | 22 |
| cerebral cortex | 8.33e-68 | 25 |
| pallium | 8.33e-68 | 25 |
| regional part of telencephalon | 1.88e-53 | 32 |
| cerebral hemisphere | 1.88e-53 | 32 |
| brain grey matter | 2.10e-50 | 34 |
| gray matter | 2.10e-50 | 34 |
| telencephalon | 2.10e-50 | 34 |
| regional part of forebrain | 5.11e-42 | 41 |
Showing 1 to 10 of 45 entries
