FFCP PHASE1:Hg19::chr13:20762566..20762577,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:20762566..20762577,- | |||
|coexpression_cluster_id=C1702 | |coexpression_cluster_id=C1702 | ||
|description=CAGE_peak_at_chr13:20762566..20762577,- | |description=CAGE_peak_at_chr13:20762566..20762577,- | ||
Latest revision as of 14:58, 24 July 2015
| Short description: | p@chr13:20762566..20762577, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr13:20762566..20762577, - |
| Coexpression cluster: | C1702_Urothelial_Bronchial_Corneal_Sebocyte_Tracheal_Esophageal_Gingival |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr13:20762566..20762577- |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| transitional epithelial cell | 2.79e-41 | 4 |
| urothelial cell | 2.79e-41 | 4 |
| corneal epithelial cell | 2.83e-21 | 2 |
| general ecto-epithelial cell | 1.10e-11 | 14 |
| buccal mucosa cell | 6.00e-11 | 1 |
| endothelial cell of viscerocranial mucosa | 6.00e-11 | 1 |
| keratinized cell of the oral mucosa | 6.00e-11 | 1 |
| endo-epithelial cell | 3.89e-08 | 42 |
| respiratory epithelial cell | 1.92e-07 | 13 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| urothelium | 4.16e-33 | 5 |
| transitional epithelium | 1.19e-27 | 6 |
| tongue | 2.59e-14 | 3 |
| gustatory system | 2.59e-14 | 3 |
| future tongue | 2.59e-14 | 3 |
| cornea | 4.02e-11 | 4 |
| eye surface | 4.02e-11 | 4 |
| optic eminence | 4.02e-11 | 4 |
| corneal primordium | 4.02e-11 | 4 |
| head | 4.70e-08 | 56 |
Showing 1 to 10 of 20 entries
